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Initial sequencing and comparative analysis of the mouse genome
R.H. Waterston et al. NATURE 420 (6915): 520-562 DEC 5 2002 and the citing papers |
Nodes: 549
Authors: 2932,
Journals: 196,
Outer References: 18463
Collection span: 2002 - 2004
View: Overview. Sorted by date.
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| # | LCR | NCR | Nodes / Authors / Date | LCS | GCS |
|---|---|---|---|---|---|
| 501 | 5 | 73 | 501 2004 MAY [15] NATURE REVIEWS GENETICS 5(5):345-354
Eichler EE; Clark RA; She XW An assessment of the sequence gaps: Unfinished business in a finished human genome | 0 | 0 |
| 502 | 2 | 127 | 502 2004 MAY [15] NATURE REVIEWS GENETICS 5(5):355-365
Mittal V Improving the efficiency of RNA interference in mammals | 0 | 0 |
| 503 | 1 | 50 | 517 2004 MAY [15] NUCLEIC ACIDS RESEARCH 32(9):2912-2924
Osipovich AB; White-Grindley EK; Hicks GG; Roshon MJ; Shaffer C; Moore JH; Ruley HE Activation of cryptic 3 ' splice sites within introns of cellular genes following gene entrapment | 0 | 0 |
| 504 | 2 | 29 | 532 2004 MAY [15] RNA-A PUBLICATION OF THE RNA SOCIETY 10(5):757-765
Galante PAF; Sakabe NJ; Kirschbaum-Slager N; De Souza SJ Detection and evaluation of intron retention events in the human transcriptome | 0 | 0 |
| 505 | 1 | 69 | 533 2004 MAY [15] RNA-A PUBLICATION OF THE RNA SOCIETY 10(5):828-840
Carmel I; Tal S; Vig I; Ast G Comparative analysis detects dependencies among the 5 ' splice-site positions | 1 | 1 |
| 506 | 4 | 19 | 545 2004 MAY [15] TRENDS IN GENETICS 20(5):229-232
Semon M; Duret L Evidence that functional transcription units cover at least half of the human genome | 0 | 0 |
| 507 | 2 | 22 | 546 2004 MAY [15] TRENDS IN GENETICS 20(5):232-236
Wen F; Li F; Xia HY; Lu X; Zhang XG; Li YD The impact of very short alternative splicing on protein structures and functions in the human genome | 0 | 0 |
| 508 | 1 | 25 | 340 2004 MAY 22 BIOINFORMATICS 20(8):1285-1291
Gan HH; Fera D; Zorn J; Shiffeldrim N; Tang M; Laserson U; Kim N; Schlick T RAG: RNA-As-Graphs database - concepts, analysis, and features | 0 | 0 |
| 509 | 1 | 34 | 373 2004 MAY 26 GENE 333():135-141
Paces J; Zika R; Paces V; Pavlicek A; Clay O; Bernardi G Representing GC variation along eukaryotic chromosomes | 0 | 0 |
| 510 | 4 | 46 | 487 2004 MAY 27 NATURE 429(6990):382-388
Watanabe H; Fujiyama A; Hattori M; Taylor TD; Toyoda A; Kuroki Y; Noguchi H; BenKahla A; Lehrach H; Sudbrak R; Kube M; Taenzer S; Galgoczy P; Platzer M; Scharfe M; Nordsiek G; Blocker HB; Hellmann I; Khaitovich P; Paabo S; Reinhardt R; Zheng HJ; Zhang XL; Zhu GF; Wang BF; Fu G; Ren SX; Zhao GP; Chen Z; Lee YS; Cheong JE; Choi SH; Wu KM; Liu TT; Hsiao KJ; Tsai SF; Kim CG; Oota S; Kitano T; Kohara Y; Saitou N; Park HS; Wang SY; Yaspo ML; Sakaki Y DNA sequence and comparative analysis of chimpanzee chromosome 22 | 0 | 1 |
| # | LCR | NCR | Nodes / Authors / Date | LCS | GCS |
| 511 | 7 | 60 | 488 2004 MAY 27 NATURE 429(6990):440-445
Bentley DR Genomes for medicine | 0 | 0 |
| 512 | 12 | 37 | 536 2004 MAY 28 SCIENCE 304(5675):1321-1325
Bejerano G; Pheasant M; Makunin I; Stephen S; Kent WJ; Mattick JS; Haussler D Ultraconserved elements in the human genome | 0 | 0 |
| 513 | 3 | 25 | 489 2004 JUN 3 NATURE 429(6991):558-562
Bazykin GA; Kondrashov FA; Ogurtsov AY; Sunyaev S; Kondrashov AS Positive selection at sites of multiple amino acid replacements since rat-mouse divergence | 0 | 0 |
| 514 | 1 | 50 | 445 2004 JUN 4 JOURNAL OF BIOLOGICAL CHEMISTRY 279(23):24467-24476
Broer A; Klingel K; Kowalczuk S; Rasko JEJ; Cavanaugh J; Broer S Molecular cloning of mouse amino acid transport system B-0, a neutral amino acid transporter related to Hartnup disorder | 0 | 0 |
| 515 | 1 | 31 | 366 2004 JUN [15] EXPERIMENTAL GERONTOLOGY 39(6):913-916
Martin GM New opportunities for genetic approaches to aging research using Roy Walford's favorite animal | 0 | 0 |
| 516 | 1 | 27 | 376 2004 JUN [15] GENES CHROMOSOMES & CANCER 40(2):158-163
Lastowska M; Chung YJ; Ching NC; Haber M; Norris MD; Kees UR; Pearson ADJ; Jackson MS Regions syntenic to human 17q are gained in mouse and rat neuroblastoma | 0 | 0 |
| 517 | 6 | 42 | 426 2004 JUN [15] GENOME RESEARCH 14(6):1191-1198
Ovcharenko I; Boffelli D; Loots GG EShadow: A tool for comparing closely related sequences | 0 | 0 |
| 518 | 2 | 87 | 437 2004 JUN [15] GENOMICS 83(6):1012-1023
Beisel KW; Shiraki T; Morris KA; Pompeia C; Kachar B; Arakawa T; Bono H; Kawai J; Hayashizaki Y; Carninci P Identification of unique transcripts from a mouse full-length, subtracted inner ear cDNA library | 0 | 0 |
| 519 | 2 | 30 | 438 2004 JUN [15] GENOMICS 83(6):1063-1071
Ohtsuka M; Kikuchi N; Ozato K; Inoko H; Kimura M Comparative analysis of a 229-kb medaka genomic region, containing the zic1 and zic4 genes, with Fugu, human, and mouse | 0 | 0 |
| 520 | 1 | 69 | 441 2004 JUN [15] IMMUNITY 20(6):669-679
Vinuesa CG; Goodnow CC Illuminating autoimmune regulators through controlled variation of the mouse genome sequence | 0 | 0 |
| # | LCR | NCR | Nodes / Authors / Date | LCS | GCS |
| 521 | 1 | 36 | 455 2004 JUN [15] JOURNAL OF NEUROCHEMISTRY 89(5):1271-1282
Kim JB; Piao CS; Lee KW; Han PL; Ahn JI; Lee YS; Lee JK Delayed genomic responses to transient middle cerebral artery occlusion in the rat | 0 | 0 |
| 522 | 2 | 35 | 461 2004 JUN [15] JOURNAL OF VIROLOGY 78(11):5784-5798
Baillie GJ; van de Lagemaat LN; Baust C; Mager DL Multiple groups of endogenous betaretroviruses in mice, rats, and other mammals | 0 | 0 |
| 523 | 3 | 47 | 474 2004 JUN [15] MOLECULAR BIOLOGY AND EVOLUTION 21(6):984-990
Meunier J; Duret L Recombination drives the evolution of GC-content in the human genome | 0 | 0 |
| 524 | 3 | 22 | 475 2004 JUN [15] MOLECULAR BIOLOGY AND EVOLUTION 21(6):1008-1013
Friedman R; Hughes AL Two patterns of genome organization in mammals: The chromosomal distribution of duplicate genes in human and muse | 0 | 0 |
| 525 | 4 | 89 | 476 2004 JUN [15] MOLECULAR BIOLOGY AND EVOLUTION 21(6):1014-1023
Chamary JV; Hurst LD Similar rates but different modes of sequence evolution in introns and at exonic silent sites in rodents: Evidence for selectively driven codon usage | 0 | 0 |
| 526 | 4 | 134 | 503 2004 JUN [15] NATURE REVIEWS GENETICS 5(6):435-445
Ellegren H Microsatellites: Simple sequences with complex evolution | 0 | 0 |
| 527 | 13 | 86 | 504 2004 JUN [15] NATURE REVIEWS GENETICS 5(6):456-465
Boffelli D; Nobrega MA; Rubin EM Comparative genomics at the vertebrate extremes | 0 | 0 |
| 528 | 2 | 35 | 521 2004 JUN [15] PLANT PHYSIOLOGY 135(2):607-610
Gutman BL; Niyogi KK Chlamydomonas and Arabidopsis. A dynamic duo | 0 | 0 |
| 529 | 7 | 78 | 529 2004 JUN [15] PROTEOMICS 4(6):1712-1726
Southan C Has the yo-yo stopped? - An assessment of human protein-coding gene number | 0 | 0 |
| 530 | 1 | 8 | 537 2004 JUN 21 SCIENTIST 18(12):28-29
Secko D Computing gene regulation | 0 | 0 |
| # | LCR | NCR | Nodes / Authors / Date | LCS | GCS |
| 531 | 3 | 51 | 335 2004 [JUN 30] ANNUAL REVIEW OF MEDICINE 55():1-13
Austin CP The impact of the completed human genome sequence on the development of novel therapeutics for human disease | 0 | 0 |
| 532 | 2 | 29 | 353 2004 [JUN 30] CHROMOSOME RESEARCH 12(3):251-262
Xu HL; Qian YP; Nie WH; Chi JX; Yang FT; Su B Construction, characterization and chromosomal mapping of bacterial artificial chromosome (BAC) library of Yunnan snub-nosed monkey (Rhinopithecus bieti) | 0 | 0 |
| 533 | 7 | 125 | 381 2004 [JUN 30] GENOME BIOLOGY 5(1):-
Bulyk ML Computational prediction of transcription-factor binding site locations | 0 | 0 |
| 534 | 2 | 133 | 382 2004 [JUN 30] GENOME BIOLOGY 5(2):-
Koonin EV; Fedorova ND; Jackson JD; Jacobs AR; Krylov DM; Makarova KS; Mazumder R; Mekhedov SL; Nikolskaya AN; Rao BS; Rogozin IB; Smirnov S; Sorokin AV; Sverdlov AV; Vasudevan S; Wolf YI; Yin JJ; Natale DA A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes | 0 | 0 |
| 535 | 4 | 34 | 383 2004 [JUN 30] GENOME BIOLOGY 5(2):-
Kurtz S; Phillippy A; Delcher AL; Smoot M; Shumway M; Antonescu C; Salzberg SL Versatile and open software for comparing large genomes | 0 | 0 |
| 536 | 1 | 16 | 384 2004 [JUN 30] GENOME BIOLOGY 5(3):-
McCarthy EM; McDonald JF Long terminal repeat retrotransposons of Mus musculus | 0 | 0 |
| 537 | 8 | 36 | 385 2004 [JUN 30] GENOME BIOLOGY 5(4):-
Bailey JA; Baertsch R; Kent WJ; Haussler D; Eichler EE Hotspots of mammalian chromosomal evolution | 0 | 0 |
| 538 | 3 | 73 | 386 2004 [JUN 30] GENOME BIOLOGY 5(4):-
Shabalina SA; Spiridonov NA The mammalian transcriptome and the function of non-coding DNA sequences | 0 | 0 |
| 539 | 1 | 23 | 440 2004 [JUN 30] HUMAN MUTATION 23(2):170-176
Ianzano L; Young EJ; Zhao XC; Chan EM; Rodriguez MT; Torrado MV; Scherer SW; Minassian BA Loss of function of the cytoplasmic isoform of the protein laforin (EPM2A) causes lafora progressive myoclonus epilepsy | 0 | 0 |
| 540 | 1 | 184 | 446 2004 [JUN 30] JOURNAL OF BIOMEDICAL SCIENCE 11(3):278-294
Zheng ZM Regulation of alternative RNA splicing by exon definition and exon sequences in viral and mammalian gene expression | 0 | 0 |
| # | LCR | NCR | Nodes / Authors / Date | LCS | GCS |
| 541 | 1 | 67 | 452 2004 [JUN 30] JOURNAL OF INHERITED METABOLIC DISEASE 27(3):319-330
Druker R; Whitelaw E Retrotransposon-derived elements in the mammalian genome: A potential source of disease | 0 | 0 |
| 542 | 1 | 83 | 505 2004 [JUN 30] NEUROSCIENCE 123(1):17-29
Demarco GJ; Baghdoyan HA; Lydic R Carbachol in the pontine reticular formation of C57BL/6J mouse decreases acetylcholine release in prefrontal cortex | 0 | 0 |
| 543 | 2 | 14 | 520 2004 [JUN 30] PHARMACOGENOMICS JOURNAL 4(1):5-8
Mattingly CJ; Colby GT; Rosenstein MC; Forrest JN; Boyer JL Promoting comparative molecular studies in environmental health research: an overview of the comparative toxicogenomics database (CTD) | 0 | 0 |
| 544 | 2 | 58 | 530 2004 [JUN 30] REPRODUCTION FERTILITY AND DEVELOPMENT 16(1-2):79-85
Ko MSH Embryogenomics of pre-implantation mammalian development: current status | 0 | 0 |
| 545 | 1 | 46 | 531 2004 [JUN 30] REPRODUCTION FERTILITY AND DEVELOPMENT 16(1-2):87-92
Blomberg LA; Zuelke KA Serial analysis of gene expression (SAGE) during porcine embryo development | 0 | 0 |
| 546 | 3 | 34 | 490 2004 JUL 1 NATURE 430(6995):35-44
Dujon B; Sherman D; Fischer G; Durrens P; Casaregola S; Lafontaine I; de Montigny J; Marck C; Neuveglise C; Talla E; Goffard N; Frangeul L; Aigle M; Anthouard V; Babour A; Barbe V; Barnay S; Blanchin S; Beckerich JM; Beyne E; Bleykasten C; Boisrame A; Boyer J; Cattolico L; Confanioleri F; de Daruvar A; Despons L; Fabre E; Fairhead C; Ferry-Dumazet H; Groppi A; Hantraye F; Hennequin C; Jauniaux N; Joyet P; Kachouri R; Kerrest A; Koszul R; Lemaire M; Lesur I; Ma L; Muller H; Nicaud JM; Nikolski M; Oztas S; Ozier-Kalogeropoulos O; Pellenz S; Potier S; Richard GF; Straub ML; Suleau A; Swennen D; Tekaia F; Wesolowski-Louvel M; Westhof E; Wirth B; Zeniou-Meyer M; Zivanovic I; Bolotin-Fukuhara M; Thierry A; Bouchier C; Caudron B; Scarpelli C; Gaillardin C; Weissenbach J; Wincker P; Souciet JL Genome evolution in yeasts | 0 | 1 |
| 547 | 1 | 41 | 466 2004 JUL [15] MAMMALIAN GENOME 15(7):515-524
Storchova R; Gregorova S; Buckiova D; Kyselova V; Divina P; Forejt J Genetic analysis of X-linked hybrid sterility in the house mouse | 0 | 0 |
| 548 | 1 | 44 | 469 2004 JUL [15] MOLECULAR AND CELLULAR BIOLOGY 24(13):5923-5936
Kim JW; Zeller KI; Wang Y; Jegga AG; Aronow BJ; O'Donnell KA; Dang CV Evaluation of MYC E-box phylogenetic footprints in glycolytic genes by chromatin immunoprecipitation assays | 0 | 0 |
| 549 | 2 | 59 | 549 2004 JUL [15] VISION RESEARCH 44(16):1857-1867
Schmucker C; Schaeffel F A paraxial schematic eye model for the growing C57BL/6 mouse | 0 | 0 |
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