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Initial sequencing and comparative analysis of the mouse genome
R.H. Waterston et al.
NATURE
420 (6915): 520-562 DEC 5 2002
and the citing papers

Nodes: 549
Authors: 2932, Journals: 196, Outer References: 18463
Collection span: 2002 - 2004
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#LCRNCRNodes / Authors / DateLCSGCS
11951 2002 JUL [15] JOURNAL OF MAMMARY GLAND BIOLOGY AND NEOPLASIA 7(3):327-345
Rijnkels M
Multispecies comparison of the casein gene loci and evolution of casein gene family
01
213312 2002 DEC 5 NATURE 420(6915):520-562
Waterston RH; Lindblad-Toh K; Birney E; Rogers J; Abril JF; Agarwal P; Agarwala R; Ainscough R; Alexandersson M; An P; Antonarakis SE; Attwood J; Baertsch R; Bailey J; Barlow K; Beck S; Berry E; Birren B; Bloom T; Bork P; Botcherby M; Bray N; Brent MR; Brown DG; Brown SD; Bult C; Burton J; Butler J; Campbell RD; Carninci P; Cawley S; Chiaromonte F; Chinwalla AT; Church DM; Clamp M; Clee C; Collins FS; Cook LL; Copley RR; Coulson A; Couronne O; Cuff J; Curwen V; Cutts T; Daly M; David R; Davies J; Delehaunty KD; Deri J; Dermitzakis ET; Dewey C; Dickens NJ; Diekhans M; Dodge S; Dubchak I; Dunn DM; Eddy SR; Elnitski L; Emes RD; Eswara P; Eyras E; Felsenfeld A; Fewell GA; Flicek P; Foley K; Frankel WN; Fulton LA; Fulton RS; Furey TS; Gage D; Gibbs RA; Glusman G; Gnerre S; Goldman N; Goodstadt L; Grafham D; Graves TA; Green ED; Gregory S; Guigo R; Guyer M; Hardison RC; Haussler D; Hayashizaki Y; Hillier LW; Hinrichs A; Hlavina W; Holzer T; Hsu F; Hua A; Hubbard T; Hunt A; Jackson I; Jaffe DB; Johnson LS; Jones M; Jones TA; Joy A; Kamal M; Karlsson EK; Karolchik D; Kasprzyk A; Kawai J; Keibler E; Kells C; Kent WJ; Kirby A; Kolbe DL; Korf I; Kucherlapati RS; Kulbokas EJ; Kulp D; Landers T; Leger JP; Leonard S; Letunic I; Levine R; Li J; Li M; Lloyd C; Lucas S; Ma B; Maglott DR; Mardis ER; Matthews L; Mauceli E; Mayer JH; McCarthy M; McCombie WR; McLaren S; McLay K; McPherson JD; Meldrim J; Meredith B; Mesirov JP; Miller W; Miner TL; Mongin E; Montgomery KT; Morgan M; Mott R; Mullikin JC; Muzny DM; Nash WE; Nelson JO; Nhan MN; Nicol R; Ning Z; Nusbaum C; O'Connor MJ; Okazaki Y; Oliver K; Larty EO; Pachter L; Parra G; Pepin KH; Peterson J; Pevzner P; Plumb R; Pohl CS; Poliakov A; Ponce TC; Ponting CP; Potter S; Quail M; Reymond A; Roe BA; Roskin KM; Rubin EM; Rust AG; Santos R; Sapojnikov V; Schultz B; Schultz J; Schwartz MS; Schwartz S; Scott C; Seaman S; Searle S; Sharpe T; Sheridan A; Shownkeen R; Sims S; Singer JB; Slater G; Smit A; Smith DR; Spencer B; Stabenau A; Strange-Thomann NS; Sugnet C; Suyama M; Tesler G; Thompson J; Torrents D; Trevaskis E; Tromp J; Ucla C; Vidal AU; Vinson JP; von Niederhausern AC; Wade CM; Wall M; Weber RJ; Weiss RB; Wendl MC; West AP; Wetterstrand K; Wheeler R; Whelan S; Wierzbowski J; Willey D; Williams S; Wilson RK; Winter E; Worley KC; Wyman D; Yang S; Yang SP; Zdobnov EM; Zody MC; Lander ES
Initial sequencing and comparative analysis of the mouse genome
551548
31303 2002 DEC 5 NATURE 420(6915):578-582
Dermitzakis ET; Reymond A; Lyle R; Scamuffa N; Ucla C; Deutsch S; Stevenson BJ; Flegel V; Bucher P; Jongeneel CV; Antonarakis SE
Numerous potentially functional but non-genic conserved sequences on human chromosome 21
2535
4136116 2003 JAN [15] GENOME RESEARCH 13(1):1-12
Frazer KA; Elnitski L; Church DM; Dubchak I; Hardison RC
Cross-species sequence comparisons: A review of methods and available resources
1225
5187117 2003 JAN [15] GENOME RESEARCH 13(1):13-26
Hardison RC; Roskin KM; Yang S; Diekhans M; Kent WJ; Weber R; Elnitski L; Li J; O'Connor M; Kolbe D; Schwartz S; Furey TS; Whelan S; Goldman N; Smit A; Miller W; Chiaromonte F; Haussler D
Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution
2733
6142118 2003 JAN [15] GENOME RESEARCH 13(1):37-45
Pevzner P; Tesler G
Genome Rearrangements in mammalian evolution: Lessons from human and mouse genomes
920
7129119 2003 JAN [15] GENOME RESEARCH 13(1):46-54
Flicek P; Keibler E; Hu P; Korf I; Brent MR
Leveraging the mouse genome for gene prediction in human: From whole-genome shotgun reads to a global synteny map
914
8128120 2003 JAN [15] GENOME RESEARCH 13(1):64-72
Elnitski L; Hardison RC; Li J; Yang S; Kolbe D; Eswara P; O'Connor MJ; Schwartz S; Miller W; Chiaromonte F
Distinguishing regulatory DNA from neutral sites
1215
9136121 2003 JAN [15] GENOME RESEARCH 13(1):73-80
Couronne O; Poliakov A; Bray N; Ishkhanov T; Ryaboy D; Rubin E; Pachter L; Dubchak I
Strategies and tools for whole-genome alignments
1319
10121122 2003 JAN [15] GENOME RESEARCH 13(1):81-90
Mullikin JC; Ning ZM
The phusion assembler
49
#LCRNCRNodes / Authors / DateLCSGCS
11124123 2003 JAN [15] GENOME RESEARCH 13(1):97-102
Bray N; Dubchak I; Pachter L
AVID: A global alignment program
1737
12116124 2003 JAN [15] GENOME RESEARCH 13(1):103-107
Schwartz S; Kent WJ; Smit A; Zhang Z; Baertsch R; Hardison RC; Haussler D; Miller W
Human-mouse alignments with BLASTZ
3860
13140125 2003 JAN [15] GENOME RESEARCH 13(1):108-117
Parra G; Agarwal P; Abril JF; Wiehe T; Fickett JW; Guigo R
Comparative gene prediction in human and mouse
911
14210237 2003 JAN [15] NATURE BIOTECHNOLOGY 21(1):31-32
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The master mammal
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Our small relative
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Mouse genome - The mighty mouse
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Guigo R; Dermitzakis ET; Agarwal P; Ponting CP; Parra G; Reymond A; Abril JF; Keibler E; Lyle R; Ucla C; Antonarakis SE; Brent MR
Comparison of mouse and human genomes followed by experimental verification yields an estimated 1,019 additional genes
1017
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Kislinger T; Rahman K; Radulovic D; Cox B; Rossant J; Emili A
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Yoshida T; Yoshimura K
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Tag, you're hit: retroviral insertions identify genes involved in cancer
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Saada N; Dai B; Echetebu C; Sarna SK; Palade P
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2512477 2003 FEB 28 DNA RESEARCH 10(1):35-48
Okazaki N; Kikuno R; Ohara R; Inamoto S; Aizawa H; Yuasa S; Nakajima D; Nagase T; Ohara O; Koga H
Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries
34
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Primate shadow play
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Boffelli D; McAuliffe J; Ovcharenko D; Lewis KD; Ovcharenko I; Pachter L; Rubin EM
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2548
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Chemoprevention of colorectal cancer - Experimental approach and clinical applications
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Venter JC; Levy S; Stockwell T; Remington K; Halpern A
Massive parallelism, randomness and genomic advances
25
#LCRNCRNodes / Authors / DateLCSGCS
311111244 2003 MAR [15] NATURE REVIEWS GENETICS 4(3):195-205
Buer J; Balling R
Mice, microbes and models of infection
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Rogner UC; Avner P
Congenic mice: Cutting tools for complex immune disorders
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Super models
24
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More on the sequencing of the human genome
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36130226 2003 MAR 27 NATURE 422(6930):433-438
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Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events
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Comparison of the genomes of human and mouse lays the foundation of genome zoology
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Psychiatry in the genomics era
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4213844 2003 APR [15] COMPARATIVE MEDICINE 53(2):119-125
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Mouse nomenclature and maintenance of genetically engineered mice
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4315891 2003 APR [15] FOOD TECHNOLOGY 57(4):60-67
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One hundred years of mouse genetics: An intellectual history. II. The molecular revolution (1981-2002) (Reprinted from The New Yorker, 2003)
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45334126 2003 APR [15] GENOME RESEARCH 13(4):732-741
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The ascidian tadpole larva: Comparative molecular development and genomics
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New technologies to assess genotype-phenotype relationships
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Response from Jeffrey I. Gordon et al.: Commensal bacteria make a difference
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A vision for the future of genomics research
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Human chromosome 7: DNA sequence and biology
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Loci on Chromosomes 2, 4, 9, and 16 for body weight, body length, and adiposity identified in a genome scan of an F-2 intercross between the 129P3/J and C57BU6ByJ mouse strains
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Response to Petri: Can a proteornics strategy be used to identify the anti-malarial activity of chloroquine?
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Optimized vector for conditional gene targeting in mouse embryonic stem cells
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Musculoskeletal diseases: from complex genetics to therapy - Editorial overview
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Genome comparisons and analysis
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From subgenome analysis to protein structure
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A genomewide survey of developmentally relevant genes in Ciona intestinalis - IX. Genes for muscle structural proteins
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Carninci P; Waki K; Shiraki T; Konno H; Shibata K; Itoh M; Aizawa K; Arakawa T; Ishii Y; Sasaki D; Bono H; Kondo S; Sugahara Y; Saito R; Osato N; Fukuda S; Sato K; Watahiki A; Hirozane-Kishikawa T; Nakamura M; Shibata Y; Yasunishi A; Kikuchi N; Yoshiki A; Kusakabe M; Gustincich S; Beisel K; Pavan W; Aidinis V; Nakagawara A; Held WA; Iwata H; Kono T; Nakauchi H; Lyons P; Wells C; Hume DA; Fagiolini M; Hensch TK; Brinkmeier M; Camper S; Hirota J; Mombaerts P; Muramatsu M; Okazaki Y; Kawai J; Hayashizaki Y
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Antisense transcripts with FANTOM2 clone set and their implications for gene regulation
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