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Wed Mar 15 14:12:31 2006

Proof and evolutionary analysis of ancient genome
duplication in the yeast Saccharomyces cerevisiae

KELLIS M, BIRREN BW, LANDER ES
NATURE 428: 617-624 2004
and the citing papers

Nodes: 134, Authors: 705, Journals: 59, Outer References: 5204, Words: 591
Yearly output  |  Document Type  |  Language  |  Institution  |  Institution with Subdivision  |  Country
Collection span: 2004 - 2006
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#LCRNCRNode / Date / Journal / AuthorLCSGCS
10114251 2005 AUG 23 CURRENT BIOLOGY 15 (16): 1439-1447
Connerly PL; Esaki M; Montegna EA; Strongin DE; Levi S; et al.
Sec16 is a determinant of transitional ER organization
00
10222770 2005 SEP [15] GENETICS 171 (1): 63-69
Sugino RP; Innan H
Estimating the time to the whole-genome duplication and the duration of concerted evolution via gene conversion in yeast
00
103359110 2005 SEP [15] PLANT MOLECULAR BIOLOGY 59 (1): 63-74
Wang HB; Yu LJ; Lai F; Liu LS; Wang JF
Molecular evidence for asymmetric evolution of sister duplicated blocks after cereal polyploidy
00
104138119 2005 SEP 23 SCIENCE 309 (5743): 2010-2013
Raser JM; O'Shea EK
Noise in gene expression: Origins, consequences, and control
03
105150114 2005 OCT 4 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 102 (40): 14338-14343
Drummond DA; Bloom JD; Adami C; Wilke CO; Arnold FH
Why highly expressed proteins evolve slowly
01
106217447 2005 OCT [15] CELLULAR AND MOLECULAR LIFE SCIENCES 62 (19-20): 2204-2227
del Arco A; Satrustegui J
New mitochondrial carriers: an overview
00
10722153 2005 OCT [15] CURRENT GENETICS 48 (4): 247-255
Walther A; Wendland J
Initial molecular characterization of a novel Rho-type GTPase RhoH in the filamentous ascomycete Ashbya gossypii
00
10824558 2005 OCT [15] CURRENT OPINION IN MICROBIOLOGY 8 (5): 572-578
Lawrence JG; Hendrickson H
Genome evolution in bacteria: order beneath chaos
00
10947374 2005 OCT [15] GENOME RESEARCH 15 (10): 1421-1430
Kuepfer L; Sauer U; Blank LM
Metabolic functions of duplicate genes in Saccharomyces cerevisiae
00
11042975 2005 OCT [15] GENOME RESEARCH 15 (10): 1456-1461
Byrne KP; Wolfe KH
The Yeast Gene Order Browser: Combining curated homology and syntenic context reveals gene fate in polyploid species
11
#LCRNCRNode / Date / Journal / AuthorLCSGCS
111312198 2005 OCT [15] NATURE REVIEWS MICROBIOLOGY 3 (10): 753-764
Idnurm A; Bahn YS; Nielsen K; Lin XR; Fraser JA; et al.
Deciphering the model pathogenic fungus Cryptococcus neoformans
04
112251111 2005 OCT [15] PLOS BIOLOGY 3 (10): 1700-1708
Dehal P; Boore JL
Two rounds of whole genome duplication in the ancestral vertebrate
00
113133122 2005 OCT [15] TRENDS IN GENETICS 21 (10): 548-551
Davis JC; Petrov DA
Do disparate mechanisms of duplication add similar genes to the genome?
00
114382123 2005 OCT [15] TRENDS IN GENETICS 21 (10): 559-567
Panopoulou G; Poustka AJ
Timing and mechanism of ancient vertebrate genome duplications - the adventure of a hypothesis
00
11527648 2005 NOV-DEC [NOV 15] COMPLEXITY 11 (2): 14-27
Zuckerkandl E
"Natural restoration" can generate biological complexity
00
1162699 2005 NOV [15] NATURE REVIEWS MICROBIOLOGY 3 (11): 832-833
Pain A
Genome watch - Fungi behaving badly
00
117535124 2005 NOV [15] TRENDS IN GENETICS 21 (11): 602-607
Li WH; Yang J; Gu X
Expression divergence between duplicate genes
00
118125056 2005 DEC [15] CURRENT OPINION IN GENETICS & DEVELOPMENT 15 (6): 614-620
Dujon B
Hemiascomycetous yeasts at the forefront of comparative genomics
00
119113465 2005 DEC [15] FEMS YEAST RESEARCH 5 (12): 1115-1128
Rubio-Texeira M
A comparative analysis of the GAL genetic switch between not-so-distant cousins: Saccharomyces cerevisiae versus Kluyveromyces lactis
01
12063771 2005 DEC [15] GENETICS 171 (4): 1455-1461
van Hoof A
Conserved functions of yeast genes support the duplication, degeneration and complementation model for gene duplication
00
#LCRNCRNode / Date / Journal / AuthorLCSGCS
121311176 2005 DEC [15] GENOME RESEARCH 15 (12): 1620-1631
Galagan JE; Henn MR; Ma LJ; Cuomo CA; Birren B
Genomics of the fungal kingdom: Insights into eukaryotic biology
01
12237177 2005 DEC [15] GENOME RESEARCH 15 (12): 1675-1682
Crollius HR; Weissenbach J
Fish genomics and biology
00
12312582 2005 DEC [15] JOURNAL OF MOLECULAR EVOLUTION 61 (6): 758-764
Hughes AL; Friedman R
Gene duplication and the properties of biological networks
00
12413588 2005 DEC [15] MOLECULAR GENETICS AND GENOMICS 274 (6): 579-588
Park JY; Koo DH; Hong CP; Lee SJ; Jeon JW; et al.
Physical mapping and microsynteny of Brassica rapa ssp pekinensis genome corresponding to a 222 kbp gene-rich region of Arabidopsis chromosome 4 and partially duplicated on chromosome 5
00
12513096 2005 DEC [15] NATURE GENETICS 37 (12): 1372-1375
Pal C; Papp B; Lercher MJ
Adaptive evolution of bacterial metabolic networks by horizontal gene transfer
00
1263133125 2005 DEC [15] TRENDS IN GENETICS 21 (12): 673-682
Coghlan A; Eichler EE; Oliver SG; Paterson AH; Stein L
Chromosome evolution in eukaryotes: a multi-kingdom perspective
00
127341130 2006 JAN [15] MOLECULAR BIOLOGY AND EVOLUTION 23 (1): 144-151
He XL; Zhang JZ
Higher duplicability of less important genes in yeast genomes
00
128146134 2006 JAN [15] TRENDS IN GENETICS 22 (1): 56-63
Ooi SL; Pan XW; Peyser BD; Ye P; Meluh PB; et al.
Global synthetic-lethality analysis and yeast functional profiling
00
129143128 2006 JAN 30 JOURNAL OF CELL BIOLOGY 172 (3): 347-362
Gladfelter AS; Hungerbuehler AK; Philippsen P
Asynchronous nuclear division cycles in multinucleated cells
00
130433131 2006 FEB [15] MOLECULAR BIOLOGY AND EVOLUTION 23 (2): 245-253
Fares MA; Byrne KP; Wolfe KH
Rate asymmetry after genome duplication causes substantial long-branch attraction artifacts in the phylogeny of Saccharomyces species
00
#LCRNCRNode / Date / Journal / AuthorLCSGCS
131153132 2006 FEB [15] NATURE STRUCTURAL & MOLECULAR BIOLOGY 13 (2): 168-176
Aviv T; Lin Z; Ben-Ari G; Smibert CA; Sicheri F
Sequence-specific recognition of RNA hairpins by the SAM domain of Vts1p
00
132353133 2006 FEB 21 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 103 (8): 2730-2735
Chapman BA; Bowers JE; Feltus FA; Paterson AH
Buffering of crucial functions by paleologous duplicated genes may contribute cyclicality to angiosperm genome duplication
00
1331117127 2006 MAR-APR [MAR 15] BIOTECHNOLOGY ADVANCES 24 (2): 210-223
Rubio-Texeira M
Endless versatility in the biotechnological applications of Kluyveromyces LAC genes
00
134120129 2006 MAR [15] MOLECULAR AND BIOCHEMICAL PARASITOLOGY 146 (1): 24-29
Clark CG; Ali IKM; Zaki M; Loftus BJ; Hall N
Unique organisation of tRNA genes in Entamoeba histolytica
00

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