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Wed Mar 15 14:12:31 2006

Proof and evolutionary analysis of ancient genome
duplication in the yeast Saccharomyces cerevisiae

KELLIS M, BIRREN BW, LANDER ES
NATURE 428: 617-624 2004
and the citing papers

Nodes: 134, Authors: 705, Journals: 59, Outer References: 5204, Words: 591
Yearly output  |  Document Type  |  Language  |  Institution  |  Institution with Subdivision  |  Country
Collection span: 2004 - 2006
View: Overview   Sorted by first author.

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#LCRNCRNode / Date / Journal / AuthorLCSGCS
101138119 2005 SCIENCE 309 (5743): 2010-2013
Raser JM; O'Shea EK
Noise in gene expression: Origins, consequences, and control
03
10221442 2005 BIOFUTUR (254): 29-33
Robinson-Rechavi M
Fish, a successful genomic duplication
00
10335987 2005 MOLECULAR BIOLOGY AND EVOLUTION 22 (5): 1337-1344
Rokas A; Carroll SB
More genes or more taxa? The relative contribution of gene number and taxon number to phylogenetic accuracy
04
104113465 2005 FEMS YEAST RESEARCH 5 (12): 1115-1128
Rubio-Texeira M
A comparative analysis of the GAL genetic switch between not-so-distant cousins: Saccharomyces cerevisiae versus Kluyveromyces lactis
01
1051117127 2006 BIOTECHNOLOGY ADVANCES 24 (2): 210-223
Rubio-Texeira M
Endless versatility in the biotechnological applications of Kluyveromyces LAC genes
00
106130105 2005 NUCLEIC ACIDS RESEARCH 33 (19): 6319-6326
Schacherer J; de Montigny J; Welcker A; Souciet JL; Potier S
Duplication processes in Saccharomyces cerevisiae haploid strains
00
10717455 2005 CURRENT OPINION IN GENETICS & DEVELOPMENT 15 (2): 214-221
Siggia ED
Computational methods for transcriptional regulation
02
1081584 2004 BIOESSAYS 26 (11): 1225-1235
Simillion C; Vandepoele K; Van de Peer Y
Recent developments in computational approaches for uncovering genomic homology
02
10912211 2004 FEMS MICROBIOLOGY LETTERS 239 (1): 95-101
Sims AH; Dunn-Coleman NS; Robson GD; Oliver SG
Glutamic protease distribution is limited to filamentous fungi
02
11022770 2005 GENETICS 171 (1): 63-69
Sugino RP; Innan H
Estimating the time to the whole-genome duplication and the duration of concerted evolution via gene conversion in yeast
00
#LCRNCRNode / Date / Journal / AuthorLCSGCS
1111241 2004 ALGORITHMS IN BIOINFORMATICS, PROCEEDINGS 3240: 326-337
Sundararajan M; Brudno M; Small K; Sidow A; Batzoglou S
Chaining algorithms for alignment of draft sequence
00
11211452 2004 ANNUAL REVIEW OF GENETICS 38: 615-643
Taylor JS; Raes J
Duplication and divergence: The evolution of new genes and old ideas
212
11313094 2005 NATURE GENETICS 37 (6): 630-635
Thomson JM; Gaucher EA; Burgan MF; De Kee DW; Li T; et al.
Resurrecting ancestral alcohol dehydrogenases from yeast
02
11411523 2004 MICROBIOLOGY-SGM 150: 1603-1606
Ussery DW; Hallin PF; Lagesen K; Wassenaar TM
Genome Update: tRNAs in sequenced microbial genomes
01
11532217 2004 GENOME BIOLOGY 5 (12): Art. No. 250
Van de Peer Y
Tetraodon genome confirms Takifugu findings: most fish are ancient polyploids
06
116110231 2004 NATURE REVIEWS GENETICS 5 (10): 752-763
Van de Peer Y
Computational approaches to unveiling ancient genome duplications
39
11763771 2005 GENETICS 171 (4): 1455-1461
van Hoof A
Conserved functions of yeast genes support the duplication, degeneration and complementation model for gene duplication
00
11813215 2004 GENETICS 168 (1): 569-574
Veitia RA
Gene dosage balance in cellular pathways: Implications for dominance and gene duplicability
15
119240106 2005 PLANT CELL 17 (1): 4-11
Veitia RA
Paralogs in polyploids: One for all and all for one?
05
12016333 2004 NATURE REVIEWS MICROBIOLOGY 2 (7): 533-540
Verstrepen KJ; Reynolds TB; Fink GR
Origins of variation in the fungal cell surface
08
#LCRNCRNode / Date / Journal / AuthorLCSGCS
12113624 2004 MOLECULAR BIOLOGY AND EVOLUTION 21 (11): 2116-2121
Wagner GP; Fried C; Prohaska SJ; Stadler PF
Divergence of conserved non-coding sequences: rate estimates and relative rate tests
15
12226281 2005 JOURNAL OF MOLECULAR EVOLUTION 60 (5): 665-676
Wagner GP; Takahashi K; Lynch V; Prohaska SJ; Fried C; et al.
Molecular evolution of duplicated ray finned fish HoxA clusters: Increased synonymous substitution rate and asymmetrical co-divergence of coding and non-coding sequences
01
12322153 2005 CURRENT GENETICS 48 (4): 247-255
Walther A; Wendland J
Initial molecular characterization of a novel Rho-type GTPase RhoH in the filamentous ascomycete Ashbya gossypii
00
124359110 2005 PLANT MOLECULAR BIOLOGY 59 (1): 63-74
Wang HB; Yu LJ; Lai F; Liu LS; Wang JF
Molecular evidence for asymmetric evolution of sister duplicated blocks after cereal polyploidy
00
1251333 2004 BIOCHEMISTRY 43 (37): 11782-11789
Wang HH; Cronan JE
Only one of the two annotated Lactococcus lactis fabG genes encodes a functional beta-ketoacyl-acyl carrier protein reductase
01
12617197 2005 NATURE REVIEWS MICROBIOLOGY 3 (5): 421-429
Wendland J; Walther A
Ashbya gossypii: A model for fungal developmental biology
13
1271208 2004 CURRENT BIOLOGY 14 (10): R392-R394
Wolfe K
Evolutionary genomics: Yeasts accelerate beyond BLAST
013
12833095 2005 NATURE GENETICS 37 (7): 777-782
Wong S; Wolfe KH
Birth of a metabolic gene cluster in yeast by adaptive gene relocation
02
12914078 2005 INTERNATIONAL JOURNAL FOR PARASITOLOGY 35 (2): 225-233
Yeo M; Acosta N; Llewellyn M; Sanchez H; Adamson S; et al.
Origins of Chagas disease: Didelphis species are natural hosts of Trypanosoma cruzi I and armadillos hosts of Trypanosoma cruzi II, including hybrids
04
13013543 2005 BIOINFORMATICS 21 (7): 869-879
Yin P; Hartemink AJ
Theoretical and practical advances in genome halving
00
#LCRNCRNode / Date / Journal / AuthorLCSGCS
13112185 2005 MOLECULAR BIOLOGY AND EVOLUTION 22 (3): 501-505
Zhang Z; Luo ZW; Kishino H; Kearsey MJ
Divergence pattern of duplicate genes in protein-protein interactions follows the power law
02
13235152 2005 CURRENT GENETICS 48 (2): 77-87
Zhang ZH; Dietrich FS
Identification and characterization of upstream open reading frames (uORF) in the 5 ' untranslated regions (UTR) of genes in Saccharomyces cerevisiae
00
133288102 2005 NUCLEIC ACIDS RESEARCH 33 (9): 2838-2851
Zhang ZH; Dietrich FS
Mapping of transcription start sites in Saccharomyces cerevisiae using 5 ' SAGE
22
13427648 2005 COMPLEXITY 11 (2): 14-27
Zuckerkandl E
"Natural restoration" can generate biological complexity
00

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