HistCite - The sequence of the human genome (Venter)

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#	Date / Author / Journal	LCS	GCS	LCR	CR
1	64 Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, et al. Initial sequencing and analysis of the human genome NATURE. 2001 FEB 15; 409 (6822): 860-921	3154	7358	1	450
2	71 Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, et al. The sequence of the human genome SCIENCE. 2001 FEB 16; 291 (5507): 1304-+	5170	5170	2	192
3	1544 Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, et al. Initial sequencing and comparative analysis of the mouse genome NATURE. 2002 DEC 5; 420 (6915): 520-562	462	2474	29	331
4	1174 Gabriel SB, Schaffner SF, Nguyen H, Moore JM, Roy J, et al. The structure of haplotype blocks in the human genome SCIENCE. 2002 JUN 21; 296 (5576): 2225-2229	97	1971	1	32
5	3489 Altshuler D, Brooks LD, Chakravarti A, Collins FS, Daly MJ, et al. A haplotype map of the human genome NATURE. 2005 OCT 27; 437 (7063): 1299-1320	116	1927	10	103
6	1546 Manning G, Whyte DB, Martinez R, Hunter T, Sudarsanam S The protein kinase complement of the human genome SCIENCE. 2002 DEC 6; 298 (5600): 1912-+	57	1587	4	36
7	2351 Gibbs RA, Belmont JW, Hardenbol P, Willis TD, Yu FL, et al. The International HapMap Project NATURE. 2003 DEC 18; 426 (6968): 789-796	89	1480	5	68
8	768 Bird A DNA methylation patterns and epigenetic memory GENES & DEVELOPMENT. 2002 JAN 1; 16 (1): 6-21	27	1224	4	202
9	1005 Goff SA, Ricke D, Lan TH, Presting G, Wang RL, et al. A draft sequence of the rice genome (Oryza sativa L. ssp japonica) SCIENCE. 2002 APR 5; 296 (5565): 92-100	67	1195	3	94
10	1004 Yu J, Hu SN, Wang J, Wong GKS, Li SG, et al. A draft sequence of the rice genome (Oryza sativa L. ssp indica) SCIENCE. 2002 APR 5; 296 (5565): 79-92	64	1171	4	109
#	Date / Author / Journal	LCS	GCS	LCR	CR
11	1736 Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, et al. Systematic functional analysis of the Caenorhabditis elegans genome using RNAi NATURE. 2003 JAN 16; 421 (6920): 231-237	26	1011	3	40
12	1391 North RA Molecular physiology of P2X receptors PHYSIOLOGICAL REVIEWS. 2002 OCT; 82 (4): 1013-1067	1	946	2	526
13	802 Schaid DJ, Rowland CM, Tines DE, Jacobson RM, Poland GA Score tests for association between traits and haplotypes when linkage phase is ambiguous AMERICAN JOURNAL OF HUMAN GENETICS. 2002 FEB; 70 (2): 425-434	11	903	2	40
14	2953 Collins FS, Lander ES, Rogers J, Waterston RH, Int Human Genome Sequencing Conso Finishing the euchromatic sequence of the human genome NATURE. 2004 OCT 21; 431 (7011): 931-945	167	901	18	71
15	1401 Holt RA, Subramanian GM, Halpern A, Sutton GG, Charlab R, et al. The genome sequence of the malaria mosquito Anopheles gambiae SCIENCE. 2002 OCT 4; 298 (5591): 129-+	77	827	3	52
16	2683 Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, et al. A gene atlas of the mouse and human protein-encoding transcriptomes PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 APR 20; 101 (16): 6062-6067	25	820	7	36
17	1555 Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, et al. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 DEC 24; 99 (26): 16899-16903	49	801	4	18
18	983 Cartegni L, Chew SL, Krainer AR Listening to silence and understanding nonsense: Exonic mutations that affect splicing NATURE REVIEWS GENETICS. 2002 APR; 3 (4): 285-298	24	781	4	149
19	2672 Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution NATURE. 2004 APR 1; 428 (6982): 493-521	118	752	32	226
20	91 Kuehl P, Zhang J, Lin Y, Lamba J, Assem M, et al. Sequence diversity in CYP3A promoters and characterization of the genetic basis of polymorphic CYP3A5 expression NATURE GENETICS. 2001 APR; 27 (4): 383-391	15	721	2	44
#	Date / Author / Journal	LCS	GCS	LCR	CR
21	1299 Aparicio S, Chapman J, Stupka E, Putnam N, Chia J, et al. Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes SCIENCE. 2002 AUG 23; 297 (5585): 1301-1310	108	720	4	97
22	1549 Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, et al. The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins SCIENCE. 2002 DEC 13; 298 (5601): 2157-2167	63	709	4	90
23	1002 Su AI, Cooke MP, Ching KA, Hakak Y, Walker JR, et al. Large-scale analysis of the human and mouse transcriptomes PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 APR 2; 99 (7): 4465-4470	24	697	2	25
24	4274 Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project NATURE. 2007 JUN 14; 447 (7146): 799-816	39	671	25	128
25	2468 Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, et al. Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium AMERICAN JOURNAL OF HUMAN GENETICS. 2004 JAN; 74 (1): 106-120	21	643	5	41
26	1326 Hopkins AL, Groom CR The druggable genome NATURE REVIEWS DRUG DISCOVERY. 2002 SEP; 1 (9): 727-730	52	628	4	15
27	869 Wood V, Gwilliam R, Rajandream MA, Lyne M, Lyne R, et al. The genome sequence of Schizosaccharomyces pombe NATURE. 2002 FEB 21; 415 (6874): 871-880	49	620	2	78
28	1545 Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, et al. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs NATURE. 2002 DEC 5; 420 (6915): 563-573	75	619	12	52
29	753 Modrek B, Lee C A genomic view of alternative splicing NATURE GENETICS. 2002 JAN; 30 (1): 13-19	68	609	2	39
30	470 Brazil DP, Hemmings BA Ten years of protein kinase B signalling: a hard Akt to follow TRENDS IN BIOCHEMICAL SCIENCES. 2001 NOV; 26 (11): 657-664	0	574	1	67
#	Date / Author / Journal	LCS	GCS	LCR	CR
31	2578 Cawley S, Bekiranov S, Ng HH, Kapranov P, Sekinger EA, et al. Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs CELL. 2004 FEB 20; 116 (4): 499-509	36	545	9	49
32	1075 Panda S, Antoch MP, Miller BH, Su AI, Schook AB, et al. Coordinated transcription of key pathways in the mouse by the circadian clock CELL. 2002 MAY 3; 109 (3): 307-320	3	535	4	73
33	1833 Botstein D, Risch N Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease NATURE GENETICS. 2003 MAR; 33: 228-237	58	530	5	78
34	1296 Schroder ARW, Shinn P, Chen HM, Berry C, Ecker JR, et al. HIV-1 integration in the human genome favors active genes and local hotspots CELL. 2002 AUG 23; 110 (4): 521-529	32	514	2	54
35	2052 Skaletsky H, Kuroda-Kawaguchi T, Minx PJ, Cordum HS, Hillier L, et al. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes NATURE. 2003 JUN 19; 423 (6942): 825-U2	18	506	7	50
36	1920 Galagan JE, Calvo SE, Borkovich KA, Selker EU, Read ND, et al. The genome sequence of the filamentous fungus Neurospora crassa NATURE. 2003 APR 24; 422 (6934): 859-868	24	489	1	72
37	1284 Bailey JA, Gu ZP, Clark RA, Reinert K, Samonte RV, et al. Recent segmental duplications in the human genome SCIENCE. 2002 AUG 9; 297 (5583): 1003-1007	61	488	6	25
38	1224 Schmidt A, Hall A Guanine nucleotide exchange factors for Rho GTPases: turning on the switch GENES & DEVELOPMENT. 2002 JUL 1; 16 (13): 1587-1609	6	485	4	194
39	184 Dean M, Rzhetsky A, Allikmets R The human ATP-binding cassette (ABC) transporter superfamily GENOME RESEARCH. 2001 JUL; 11 (7): 1156-1166	8	481	2	70
40	3554 Lindblad-Toh K, Wade CM, Mikkelsen TS, Karlsson EK, Jaffe DB, et al. Genome sequence, comparative analysis and haplotype structure of the domestic dog NATURE. 2005 DEC 8; 438 (7069): 803-819	36	470	21	119
#	Date / Author / Journal	LCS	GCS	LCR	CR
41	777 Letunic I, Goodstadt L, Dickens NJ, Doerks T, Schultz J, et al. Recent improvements to the SMART domain-based sequence annotation resource NUCLEIC ACIDS RESEARCH. 2002 JAN 1; 30 (1): 242-244	12	463	3	18
42	1915 Pawson T, Nash P Assembly of cell regulatory systems through protein interaction domains SCIENCE. 2003 APR 18; 300 (5618): 445-452	17	453	3	148
43	211 Cravatt BF, Demarest K, Patricelli MP, Bracey MH, Giang DK, et al. Supersensitivity to anandamide and enhanced endogenous cannabinoid signaling in mice lacking fatty acid amide hydrolase PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2001 JUL 31; 98 (16): 9371-9376	1	451	2	41
44	2565 Maquat LE Nonsense-mediated mRNA decay: Splicing, translation and mRNP dynamics NATURE REVIEWS MOLECULAR CELL BIOLOGY. 2004 FEB; 5 (2): 89-99	10	451	3	162
45	133 Hooper LV, Gordon JI Commensal host-bacterial relationships in the gut SCIENCE. 2001 MAY 11; 292 (5519): 1115-1118	4	436	2	51
46	15 Ideker T, Galitski T, Hood L A new approach to decoding life: Systems biology ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS. 2001; 2: 343-372	33	426	2	142
47	232 Black AR, Black JD, Azizkhan-Clifford J Sp1 and kruppel-like factor family of transcription factors in cell growth regulation and cancer JOURNAL OF CELLULAR PHYSIOLOGY. 2001 AUG; 188 (2): 143-160	6	418	2	267
48	1986 Kryukov GV, Castellano S, Novoselov SV, Lobanov AV, Zehtab O, et al. Characterization of mammalian selenoproteomes SCIENCE. 2003 MAY 30; 300 (5624): 1439-1443	6	413	3	27
49	2252 Stuart JM, Segal E, Koller D, Kim SK A gene-coexpression network for global discovery of conserved genetic modules SCIENCE. 2003 OCT 10; 302 (5643): 249-255	10	399	3	30
50	3201 Hirschhorn JN, Daly MJ Genome-wide association studies for common diseases and complex traits NATURE REVIEWS GENETICS. 2005 FEB; 6 (2): 95-108	22	399	14	138
#	Date / Author / Journal	LCS	GCS	LCR	CR
51	3250 Revankar CM, Cimino DF, Sklar LA, Arterburn JB, Prossnitz ER A transmembrane intracellular estrogen receptor mediates rapid cell signaling SCIENCE. 2005 MAR 11; 307 (5715): 1625-1630	3	399	1	22
52	552 Eddy SR Non-coding RNA genes and the modern RNA world NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 919-929	27	382	3	129
53	2737 Bejerano G, Pheasant M, Makunin I, Stephen S, Kent WJ, et al. Ultraconserved elements in the human genome SCIENCE. 2004 MAY 28; 304 (5675): 1321-1325	37	374	8	37
54	3378 Cartharius K, Frech K, Grote K, Klocke B, Haltmeier M, et al. Matlnspector and beyond: promoter analysis based on transcription factor binding sites BIOINFORMATICS. 2005 JUL 1; 21 (13): 2933-2942	2	374	5	48
55	553 Syvanen AC Accessing genetic variation: Genotyping single nucleotide polymorphisms NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 930-942	51	372	2	138
56	1405 Chumakov I, Blumenfeld M, Guerassimenko O, Cavarec L, Palicio M, et al. Genetic and physiological data implicating the new human gene G72 and the gene for D-amino acid oxidase in schizophrenia PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 OCT 15; 99 (21): 13675-13680	10	372	2	49
57	279 van der Flier A, Sonnenberg A Function and interactions of integrins CELL AND TISSUE RESEARCH. 2001 SEP; 305 (3): 285-298	8	365	1	198
58	2956 Feingold EA, Good PJ, Guyer MS, Kamholz S, Liefer L, et al. The ENCODE (ENCyclopedia of DNA elements) Project SCIENCE. 2004 OCT 22; 306 (5296): 636-640	46	365	11	28
59	541 Moustakas A, Souchelnytskyi S, Heldin CH Smad regulation in TGF-beta signal transduction JOURNAL OF CELL SCIENCE. 2001 DEC; 114 (24): 4359-4369	3	357	2	113
60	293 Harris BZ, Lim WA Mechanism and role of PDZ domains in signaling complex assembly JOURNAL OF CELL SCIENCE. 2001 SEP; 114 (18): 3219-3231	8	353	2	104
#	Date / Author / Journal	LCS	GCS	LCR	CR
61	2234 Peri S, Navarro JD, Amanchy R, Kristiansen TZ, Jonnalagadda CK, et al. Development of human protein reference database as an initial platform for approaching systems biology in humans GENOME RESEARCH. 2003 OCT; 13 (10): 2363-2371	11	352	6	39
62	1228 Maniatis T, Tasic B Alternative pre-mRNA splicing and proteome expansion in metazoans NATURE. 2002 JUL 11; 418 (6894): 236-243	20	349	12	96
63	3311 Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, et al. Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution SCIENCE. 2005 MAY 20; 308 (5725): 1149-1154	30	346	13	35
64	2191 Wray GA, Hahn MW, Abouheif E, Balhoff JP, Pizer M, et al. The evolution of transcriptional regulation in eukaryotes MOLECULAR BIOLOGY AND EVOLUTION. 2003 SEP; 20 (9): 1377-1419	12	341	4	432
65	1214 Kellenberger S, Schild L Epithelial sodium channel/degenerin family of ion channels: A variety of functions for a shared structure PHYSIOLOGICAL REVIEWS. 2002 JUL; 82 (3): 735-767	1	338	1	274
66	842 Stankiewicz P, Lupski JR Genome architecture, rearrangements and genomic disorders TRENDS IN GENETICS. 2002 FEB; 18 (2): 74-82	26	337	5	83
67	13 Mackay TFC The genetic architecture of quantitative traits ANNUAL REVIEW OF GENETICS. 2001; 35: 303-339	5	333	2	251
68	1726 Litchfield DW Protein kinase CK2: structure, regulation and role in cellular decisions of life and death BIOCHEMICAL JOURNAL. 2003 JAN 1; 369: 1-15	0	330	4	206
69	616 Casanova JL, Abel L Genetic dissection of immunity to mycobacteria: The human model ANNUAL REVIEW OF IMMUNOLOGY. 2002; 20: 581-620	1	324	2	209
70	3700 Feuk L, Carson AR, Scherer SW Structural variation in the human genome NATURE REVIEWS GENETICS. 2006 FEB; 7 (2): 85-97	20	323	11	113
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71	1059 Saha S, Sparks AB, Rago C, Akmaev V, Wang CJ, et al. Using the transcriptome to annotate the genome NATURE BIOTECHNOLOGY. 2002 MAY; 20 (5): 508-512	43	312	2	19
72	2641 Blanchette M, Kent WJ, Riemer C, Elnitski L, Smit AFA, et al. Aligning multiple genomic sequences with the threaded blockset aligner GENOME RESEARCH. 2004 APR; 14 (4): 708-715	18	311	4	26
73	618 Angers S, Salahpour A, Bouvier M Dimerization: An emerging concept for G protein-coupled receptor ontogeny and function ANNUAL REVIEW OF PHARMACOLOGY AND TOXICOLOGY. 2002; 42: 409-435	8	310	1	77
74	4150 Hampe J, Franke A, Rosenstiel P, Till A, Teuber M, et al. A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1 NATURE GENETICS. 2007 FEB; 39 (2): 207-211	8	310	1	30
75	190 Dean M, Hamon Y, Chimini G The human ATP-binding cassette (ABC) transporter superfamily JOURNAL OF LIPID RESEARCH. 2001 JUL; 42 (7): 1007-1017	2	303	2	106
76	291 Wakeland EK, Liu K, Graham RR, Behrens TW Delineating the genetic basis of systemic lupus erythematosus IMMUNITY. 2001 SEP; 15 (3): 397-408	1	298	2	84
77	1060 Tabor HK, Risch NJ, Myers RM Candidate-gene approaches for studying complex genetic traits: practical considerations NATURE REVIEWS GENETICS. 2002 MAY; 3 (5): 391-A396	27	297	7	60
78	353 Huelsken J, Birchmeier W New aspects of Wnt signaling pathways in higher vertebrates CURRENT OPINION IN GENETICS & DEVELOPMENT. 2001 OCT; 11 (5): 547-553	0	293	1	83
79	2344 Clark AG, Glanowski S, Nielsen R, Thomas PD, Kejariwal A, et al. Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios SCIENCE. 2003 DEC 12; 302 (5652): 1960-1963	15	289	5	23
80	989 Templin MF, Stoll D, Schrenk M, Traub PC, Vohringer CF, et al. Protein microarray technology TRENDS IN BIOTECHNOLOGY. 2002 APR; 20 (4): 160-166	8	285	2	55
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81	255 Liquori CL, Ricker K, Moseley ML, Jacobsen JF, Kress W, et al. Myotonic dystrophy type 2 caused by a CCTG expansion in intron 1 of ZNF9 SCIENCE. 2001 AUG 3; 293 (5531): 864-867	2	284	1	49
82	731 Grozinger CM, Schreiber SL Deacetylase enzymes: biological functions and the use of small-molecule inhibitors CHEMISTRY & BIOLOGY. 2002 JAN; 9 (1): 3-16	0	278	2	97
83	3057 Goll MG, Bestor TH Eukaryotic cytosine methyltransferases ANNUAL REVIEW OF BIOCHEMISTRY. 2005; 74: 481-514	4	277	4	151
84	2593 Kampa D, Cheng J, Kapranov P, Yamanaka M, Brubaker S, et al. Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22 GENOME RESEARCH. 2004 MAR; 14 (3): 331-342	39	276	7	34
85	130 Shevchenko A, Sunyaev S, Loboda A, Shevehenko A, Bork P, et al. Charting the proteomes of organisms with unsequenced genomes by MALDI-quadrupole time of flight mass spectrometry and BLAST homology searching ANALYTICAL CHEMISTRY. 2001 MAY 1; 73 (9): 1917-1926	5	274	2	48
86	421 Altmuller J, Palmer LJ, Fischer G, Scherb H, Wjst M Genomewide scans of complex human diseases: True linkage is hard to find AMERICAN JOURNAL OF HUMAN GENETICS. 2001 NOV; 69 (5): 936-950	15	273	1	135
87	979 Griffin TJ, Gygi SP, Ideker T, Rist B, Eng J, et al. Complementary profiling of gene expression at the transcriptome and proteome levels in Saccharomyces cerevisiae MOLECULAR & CELLULAR PROTEOMICS. 2002 APR; 1 (4): 323-333	8	271	2	58
88	2495 Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, et al. Complete sequencing and characterization of 21,243 full-length human cDNAs NATURE GENETICS. 2004 JAN; 36 (1): 40-45	37	269	4	29
89	1759 Blanc G, Hokamp K, Wolfe KH A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome GENOME RESEARCH. 2003 FEB; 13 (2): 137-144	8	268	6	44
90	1838 Sumner LW, Mendes P, Dixon RA Plant metabolomics: large-scale phytochemistry in the functional genomics era PHYTOCHEMISTRY. 2003 MAR; 62 (6): 817-836	2	268	5	150
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91	3173 Woolfe A, Goodson M, Goode DK, Snell P, McEwen GK, et al. Highly conserved non-coding sequences are associated with vertebrate development PLOS BIOLOGY. 2005 JAN; 3 (1): Art. No. e7	0	268	7	79
92	1896 Lemmon MA Phosphoinositide recognition domains TRAFFIC. 2003 APR; 4 (4): 201-213	2	266	3	78
93	3043 Bertone P, Stolc V, Royce TE, Rozowsky JS, Urban AE, et al. Global identification of human transcribed sequences with genome tiling arrays SCIENCE. 2004 DEC 24; 306 (5705): 2242-2246	24	266	7	21
94	142 Hastings ML, Krainer AR Pre-mRNA splicing in the new millennium CURRENT OPINION IN CELL BIOLOGY. 2001 JUN; 13 (3): 302-309	10	261	2	54
95	3289 Xu R, Wunsch D Survey of clustering algorithms IEEE TRANSACTIONS ON NEURAL NETWORKS. 2005 MAY; 16 (3): 645-678	0	256	2	294
96	2721 Goodacre R, Vaidyanathan S, Dunn WB, Harrigan GG, Kell DB Metabolomics by numbers: acquiring and understanding global metabolite data TRENDS IN BIOTECHNOLOGY. 2004 MAY; 22 (5): 245-252	5	253	1	88
97	2861 Mitchell RS, Beitzel BF, Schroder ARW, Shinn P, Chen HM, et al. Retroviral DNA integration: ASLV, HIV, and MLV show distinct target site preferences PLOS BIOLOGY. 2004 AUG; 2 (8): Art. No. e234	0	253	4	39
98	121 Wolfe KH Yesterday's polyploids and the mystery of diploidization NATURE REVIEWS GENETICS. 2001 MAY; 2 (5): 333-341	24	251	2	66
99	1141 McLysaght A, Hokamp K, Wolfe KH Extensive genomic duplication during early chordate evolution NATURE GENETICS. 2002 JUN; 31 (2): 200-204	34	250	8	31
100	333 Bieker JJ Kruppel-like factors: Three fingers in many pies JOURNAL OF BIOLOGICAL CHEMISTRY. 2001 SEP 14; 276 (37): 34355-34358	4	248	2	77

Date / Author / Journal

LCS

GCS

LCR

64 Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, et al.

Initial sequencing and analysis of the human genome

NATURE. 2001 FEB 15; 409 (6822): 860-921

3154

7358

450

71 Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, et al.

The sequence of the human genome

SCIENCE. 2001 FEB 16; 291 (5507): 1304-+

5170

192

1544 Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, et al.

Initial sequencing and comparative analysis of the mouse genome

NATURE. 2002 DEC 5; 420 (6915): 520-562

462

2474

331

1174 Gabriel SB, Schaffner SF, Nguyen H, Moore JM, Roy J, et al.

The structure of haplotype blocks in the human genome

SCIENCE. 2002 JUN 21; 296 (5576): 2225-2229

1971

3489 Altshuler D, Brooks LD, Chakravarti A, Collins FS, Daly MJ, et al.

A haplotype map of the human genome

NATURE. 2005 OCT 27; 437 (7063): 1299-1320

116

1927

103

1546 Manning G, Whyte DB, Martinez R, Hunter T, Sudarsanam S

The protein kinase complement of the human genome

SCIENCE. 2002 DEC 6; 298 (5600): 1912-+

1587

2351 Gibbs RA, Belmont JW, Hardenbol P, Willis TD, Yu FL, et al.

The International HapMap Project

NATURE. 2003 DEC 18; 426 (6968): 789-796

1480

768 Bird A

DNA methylation patterns and epigenetic memory

GENES & DEVELOPMENT. 2002 JAN 1; 16 (1): 6-21

1224

202

1005 Goff SA, Ricke D, Lan TH, Presting G, Wang RL, et al.

A draft sequence of the rice genome (Oryza sativa L. ssp japonica)

SCIENCE. 2002 APR 5; 296 (5565): 92-100

1195

1004 Yu J, Hu SN, Wang J, Wong GKS, Li SG, et al.

A draft sequence of the rice genome (Oryza sativa L. ssp indica)

SCIENCE. 2002 APR 5; 296 (5565): 79-92

1171

109

Date / Author / Journal

LCS

GCS

LCR

1736 Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, et al.

Systematic functional analysis of the Caenorhabditis elegans genome using RNAi

NATURE. 2003 JAN 16; 421 (6920): 231-237

1011

1391 North RA

Molecular physiology of P2X receptors

PHYSIOLOGICAL REVIEWS. 2002 OCT; 82 (4): 1013-1067

946

526

802 Schaid DJ, Rowland CM, Tines DE, Jacobson RM, Poland GA

Score tests for association between traits and haplotypes when linkage phase is ambiguous

AMERICAN JOURNAL OF HUMAN GENETICS. 2002 FEB; 70 (2): 425-434

903

2953 Collins FS, Lander ES, Rogers J, Waterston RH, Int Human Genome Sequencing Conso

Finishing the euchromatic sequence of the human genome

NATURE. 2004 OCT 21; 431 (7011): 931-945

167

901

1401 Holt RA, Subramanian GM, Halpern A, Sutton GG, Charlab R, et al.

The genome sequence of the malaria mosquito Anopheles gambiae

SCIENCE. 2002 OCT 4; 298 (5591): 129-+

827

2683 Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, et al.

A gene atlas of the mouse and human protein-encoding transcriptomes

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 APR 20; 101 (16): 6062-6067

820

1555 Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, et al.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 DEC 24; 99 (26): 16899-16903

801

983 Cartegni L, Chew SL, Krainer AR

Listening to silence and understanding nonsense: Exonic mutations that affect splicing

NATURE REVIEWS GENETICS. 2002 APR; 3 (4): 285-298

781

149

2672 Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, et al.

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

NATURE. 2004 APR 1; 428 (6982): 493-521

118

752

226

91 Kuehl P, Zhang J, Lin Y, Lamba J, Assem M, et al.

Sequence diversity in CYP3A promoters and characterization of the genetic basis of polymorphic CYP3A5 expression

NATURE GENETICS. 2001 APR; 27 (4): 383-391

721

Date / Author / Journal

LCS

GCS

LCR

1299 Aparicio S, Chapman J, Stupka E, Putnam N, Chia J, et al.

Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes

SCIENCE. 2002 AUG 23; 297 (5585): 1301-1310

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The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins

SCIENCE. 2002 DEC 13; 298 (5601): 2157-2167

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1002 Su AI, Cooke MP, Ching KA, Hakak Y, Walker JR, et al.

Large-scale analysis of the human and mouse transcriptomes

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 APR 2; 99 (7): 4465-4470

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4274 Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, et al.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

NATURE. 2007 JUN 14; 447 (7146): 799-816

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2468 Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, et al.

Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium

AMERICAN JOURNAL OF HUMAN GENETICS. 2004 JAN; 74 (1): 106-120

643

1326 Hopkins AL, Groom CR

The druggable genome

NATURE REVIEWS DRUG DISCOVERY. 2002 SEP; 1 (9): 727-730

628

869 Wood V, Gwilliam R, Rajandream MA, Lyne M, Lyne R, et al.

The genome sequence of Schizosaccharomyces pombe

NATURE. 2002 FEB 21; 415 (6874): 871-880

620

1545 Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, et al.

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

NATURE. 2002 DEC 5; 420 (6915): 563-573

619

753 Modrek B, Lee C

A genomic view of alternative splicing

NATURE GENETICS. 2002 JAN; 30 (1): 13-19

609

470 Brazil DP, Hemmings BA

Ten years of protein kinase B signalling: a hard Akt to follow

TRENDS IN BIOCHEMICAL SCIENCES. 2001 NOV; 26 (11): 657-664

574

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LCS

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2578 Cawley S, Bekiranov S, Ng HH, Kapranov P, Sekinger EA, et al.

Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

CELL. 2004 FEB 20; 116 (4): 499-509

545

1075 Panda S, Antoch MP, Miller BH, Su AI, Schook AB, et al.

Coordinated transcription of key pathways in the mouse by the circadian clock

CELL. 2002 MAY 3; 109 (3): 307-320

535

1833 Botstein D, Risch N

Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease

NATURE GENETICS. 2003 MAR; 33: 228-237

530

1296 Schroder ARW, Shinn P, Chen HM, Berry C, Ecker JR, et al.

HIV-1 integration in the human genome favors active genes and local hotspots

CELL. 2002 AUG 23; 110 (4): 521-529

514

2052 Skaletsky H, Kuroda-Kawaguchi T, Minx PJ, Cordum HS, Hillier L, et al.

The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes

NATURE. 2003 JUN 19; 423 (6942): 825-U2

506

1920 Galagan JE, Calvo SE, Borkovich KA, Selker EU, Read ND, et al.

The genome sequence of the filamentous fungus Neurospora crassa

NATURE. 2003 APR 24; 422 (6934): 859-868

489

1284 Bailey JA, Gu ZP, Clark RA, Reinert K, Samonte RV, et al.

Recent segmental duplications in the human genome

SCIENCE. 2002 AUG 9; 297 (5583): 1003-1007

488

1224 Schmidt A, Hall A

Guanine nucleotide exchange factors for Rho GTPases: turning on the switch

GENES & DEVELOPMENT. 2002 JUL 1; 16 (13): 1587-1609

485

194

184 Dean M, Rzhetsky A, Allikmets R

The human ATP-binding cassette (ABC) transporter superfamily

GENOME RESEARCH. 2001 JUL; 11 (7): 1156-1166

481

3554 Lindblad-Toh K, Wade CM, Mikkelsen TS, Karlsson EK, Jaffe DB, et al.

Genome sequence, comparative analysis and haplotype structure of the domestic dog

NATURE. 2005 DEC 8; 438 (7069): 803-819

470

119

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777 Letunic I, Goodstadt L, Dickens NJ, Doerks T, Schultz J, et al.

Recent improvements to the SMART domain-based sequence annotation resource

NUCLEIC ACIDS RESEARCH. 2002 JAN 1; 30 (1): 242-244

463

1915 Pawson T, Nash P

Assembly of cell regulatory systems through protein interaction domains

SCIENCE. 2003 APR 18; 300 (5618): 445-452

453

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211 Cravatt BF, Demarest K, Patricelli MP, Bracey MH, Giang DK, et al.

Supersensitivity to anandamide and enhanced endogenous cannabinoid signaling in mice lacking fatty acid amide hydrolase

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2001 JUL 31; 98 (16): 9371-9376

451

2565 Maquat LE

Nonsense-mediated mRNA decay: Splicing, translation and mRNP dynamics

NATURE REVIEWS MOLECULAR CELL BIOLOGY. 2004 FEB; 5 (2): 89-99

451

162

133 Hooper LV, Gordon JI

Commensal host-bacterial relationships in the gut

SCIENCE. 2001 MAY 11; 292 (5519): 1115-1118

436

15 Ideker T, Galitski T, Hood L

A new approach to decoding life: Systems biology

ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS. 2001; 2: 343-372

426

142

232 Black AR, Black JD, Azizkhan-Clifford J

Sp1 and kruppel-like factor family of transcription factors in cell growth regulation and cancer

JOURNAL OF CELLULAR PHYSIOLOGY. 2001 AUG; 188 (2): 143-160

418

267

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Characterization of mammalian selenoproteomes

SCIENCE. 2003 MAY 30; 300 (5624): 1439-1443

413

2252 Stuart JM, Segal E, Koller D, Kim SK

A gene-coexpression network for global discovery of conserved genetic modules

SCIENCE. 2003 OCT 10; 302 (5643): 249-255

399

3201 Hirschhorn JN, Daly MJ

Genome-wide association studies for common diseases and complex traits

NATURE REVIEWS GENETICS. 2005 FEB; 6 (2): 95-108

399

138

Date / Author / Journal

LCS

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LCR

3250 Revankar CM, Cimino DF, Sklar LA, Arterburn JB, Prossnitz ER

A transmembrane intracellular estrogen receptor mediates rapid cell signaling

SCIENCE. 2005 MAR 11; 307 (5715): 1625-1630

399

552 Eddy SR

Non-coding RNA genes and the modern RNA world

NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 919-929

382

129

2737 Bejerano G, Pheasant M, Makunin I, Stephen S, Kent WJ, et al.

Ultraconserved elements in the human genome

SCIENCE. 2004 MAY 28; 304 (5675): 1321-1325

374

3378 Cartharius K, Frech K, Grote K, Klocke B, Haltmeier M, et al.

Matlnspector and beyond: promoter analysis based on transcription factor binding sites

BIOINFORMATICS. 2005 JUL 1; 21 (13): 2933-2942

374

553 Syvanen AC

Accessing genetic variation: Genotyping single nucleotide polymorphisms

NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 930-942

372

138

1405 Chumakov I, Blumenfeld M, Guerassimenko O, Cavarec L, Palicio M, et al.

Genetic and physiological data implicating the new human gene G72 and the gene for D-amino acid oxidase in schizophrenia

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 OCT 15; 99 (21): 13675-13680

372

279 van der Flier A, Sonnenberg A

Function and interactions of integrins

CELL AND TISSUE RESEARCH. 2001 SEP; 305 (3): 285-298

365

198

2956 Feingold EA, Good PJ, Guyer MS, Kamholz S, Liefer L, et al.

The ENCODE (ENCyclopedia of DNA elements) Project

SCIENCE. 2004 OCT 22; 306 (5296): 636-640

365

541 Moustakas A, Souchelnytskyi S, Heldin CH

Smad regulation in TGF-beta signal transduction

JOURNAL OF CELL SCIENCE. 2001 DEC; 114 (24): 4359-4369

357

113

293 Harris BZ, Lim WA

Mechanism and role of PDZ domains in signaling complex assembly

JOURNAL OF CELL SCIENCE. 2001 SEP; 114 (18): 3219-3231

353

104

Date / Author / Journal

LCS

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2234 Peri S, Navarro JD, Amanchy R, Kristiansen TZ, Jonnalagadda CK, et al.

Development of human protein reference database as an initial platform for approaching systems biology in humans

GENOME RESEARCH. 2003 OCT; 13 (10): 2363-2371

352

1228 Maniatis T, Tasic B

Alternative pre-mRNA splicing and proteome expansion in metazoans

NATURE. 2002 JUL 11; 418 (6894): 236-243

349

3311 Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, et al.

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

SCIENCE. 2005 MAY 20; 308 (5725): 1149-1154

346

2191 Wray GA, Hahn MW, Abouheif E, Balhoff JP, Pizer M, et al.

The evolution of transcriptional regulation in eukaryotes

MOLECULAR BIOLOGY AND EVOLUTION. 2003 SEP; 20 (9): 1377-1419

341

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1214 Kellenberger S, Schild L

Epithelial sodium channel/degenerin family of ion channels: A variety of functions for a shared structure

PHYSIOLOGICAL REVIEWS. 2002 JUL; 82 (3): 735-767

338

274

842 Stankiewicz P, Lupski JR

Genome architecture, rearrangements and genomic disorders

TRENDS IN GENETICS. 2002 FEB; 18 (2): 74-82

337

13 Mackay TFC

The genetic architecture of quantitative traits

ANNUAL REVIEW OF GENETICS. 2001; 35: 303-339

333

251

1726 Litchfield DW

Protein kinase CK2: structure, regulation and role in cellular decisions of life and death

BIOCHEMICAL JOURNAL. 2003 JAN 1; 369: 1-15

330

206

616 Casanova JL, Abel L

Genetic dissection of immunity to mycobacteria: The human model

ANNUAL REVIEW OF IMMUNOLOGY. 2002; 20: 581-620

324

209

3700 Feuk L, Carson AR, Scherer SW

Structural variation in the human genome

NATURE REVIEWS GENETICS. 2006 FEB; 7 (2): 85-97

323

113

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1059 Saha S, Sparks AB, Rago C, Akmaev V, Wang CJ, et al.

Using the transcriptome to annotate the genome

NATURE BIOTECHNOLOGY. 2002 MAY; 20 (5): 508-512

312

2641 Blanchette M, Kent WJ, Riemer C, Elnitski L, Smit AFA, et al.

Aligning multiple genomic sequences with the threaded blockset aligner

GENOME RESEARCH. 2004 APR; 14 (4): 708-715

311

618 Angers S, Salahpour A, Bouvier M

Dimerization: An emerging concept for G protein-coupled receptor ontogeny and function

ANNUAL REVIEW OF PHARMACOLOGY AND TOXICOLOGY. 2002; 42: 409-435

310

4150 Hampe J, Franke A, Rosenstiel P, Till A, Teuber M, et al.

A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1

NATURE GENETICS. 2007 FEB; 39 (2): 207-211

310

190 Dean M, Hamon Y, Chimini G

The human ATP-binding cassette (ABC) transporter superfamily

JOURNAL OF LIPID RESEARCH. 2001 JUL; 42 (7): 1007-1017

303

106

291 Wakeland EK, Liu K, Graham RR, Behrens TW

Delineating the genetic basis of systemic lupus erythematosus

IMMUNITY. 2001 SEP; 15 (3): 397-408

298

1060 Tabor HK, Risch NJ, Myers RM

Candidate-gene approaches for studying complex genetic traits: practical considerations

NATURE REVIEWS GENETICS. 2002 MAY; 3 (5): 391-A396

297

353 Huelsken J, Birchmeier W

New aspects of Wnt signaling pathways in higher vertebrates

CURRENT OPINION IN GENETICS & DEVELOPMENT. 2001 OCT; 11 (5): 547-553

293

2344 Clark AG, Glanowski S, Nielsen R, Thomas PD, Kejariwal A, et al.

Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios

SCIENCE. 2003 DEC 12; 302 (5652): 1960-1963

289

989 Templin MF, Stoll D, Schrenk M, Traub PC, Vohringer CF, et al.

Protein microarray technology

TRENDS IN BIOTECHNOLOGY. 2002 APR; 20 (4): 160-166

285

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255 Liquori CL, Ricker K, Moseley ML, Jacobsen JF, Kress W, et al.

Myotonic dystrophy type 2 caused by a CCTG expansion in intron 1 of ZNF9

SCIENCE. 2001 AUG 3; 293 (5531): 864-867

284

731 Grozinger CM, Schreiber SL

Deacetylase enzymes: biological functions and the use of small-molecule inhibitors

CHEMISTRY & BIOLOGY. 2002 JAN; 9 (1): 3-16

278

3057 Goll MG, Bestor TH

Eukaryotic cytosine methyltransferases

ANNUAL REVIEW OF BIOCHEMISTRY. 2005; 74: 481-514

277

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2593 Kampa D, Cheng J, Kapranov P, Yamanaka M, Brubaker S, et al.

Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

GENOME RESEARCH. 2004 MAR; 14 (3): 331-342

276

130 Shevchenko A, Sunyaev S, Loboda A, Shevehenko A, Bork P, et al.

Charting the proteomes of organisms with unsequenced genomes by MALDI-quadrupole time of flight mass spectrometry and BLAST homology searching

ANALYTICAL CHEMISTRY. 2001 MAY 1; 73 (9): 1917-1926

274

421 Altmuller J, Palmer LJ, Fischer G, Scherb H, Wjst M

Genomewide scans of complex human diseases: True linkage is hard to find

AMERICAN JOURNAL OF HUMAN GENETICS. 2001 NOV; 69 (5): 936-950

273

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979 Griffin TJ, Gygi SP, Ideker T, Rist B, Eng J, et al.

Complementary profiling of gene expression at the transcriptome and proteome levels in Saccharomyces cerevisiae

MOLECULAR & CELLULAR PROTEOMICS. 2002 APR; 1 (4): 323-333

271

2495 Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, et al.

Complete sequencing and characterization of 21,243 full-length human cDNAs

NATURE GENETICS. 2004 JAN; 36 (1): 40-45

269

1759 Blanc G, Hokamp K, Wolfe KH

A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome

GENOME RESEARCH. 2003 FEB; 13 (2): 137-144

268

1838 Sumner LW, Mendes P, Dixon RA

Plant metabolomics: large-scale phytochemistry in the functional genomics era

PHYTOCHEMISTRY. 2003 MAR; 62 (6): 817-836

268

150

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3173 Woolfe A, Goodson M, Goode DK, Snell P, McEwen GK, et al.

Highly conserved non-coding sequences are associated with vertebrate development

PLOS BIOLOGY. 2005 JAN; 3 (1): Art. No. e7

268

1896 Lemmon MA

Phosphoinositide recognition domains

TRAFFIC. 2003 APR; 4 (4): 201-213

266

3043 Bertone P, Stolc V, Royce TE, Rozowsky JS, Urban AE, et al.

Global identification of human transcribed sequences with genome tiling arrays

SCIENCE. 2004 DEC 24; 306 (5705): 2242-2246

266

142 Hastings ML, Krainer AR

Pre-mRNA splicing in the new millennium

CURRENT OPINION IN CELL BIOLOGY. 2001 JUN; 13 (3): 302-309

261

3289 Xu R, Wunsch D

Survey of clustering algorithms

IEEE TRANSACTIONS ON NEURAL NETWORKS. 2005 MAY; 16 (3): 645-678

256

294

2721 Goodacre R, Vaidyanathan S, Dunn WB, Harrigan GG, Kell DB

Metabolomics by numbers: acquiring and understanding global metabolite data

TRENDS IN BIOTECHNOLOGY. 2004 MAY; 22 (5): 245-252

253

2861 Mitchell RS, Beitzel BF, Schroder ARW, Shinn P, Chen HM, et al.

Retroviral DNA integration: ASLV, HIV, and MLV show distinct target site preferences

PLOS BIOLOGY. 2004 AUG; 2 (8): Art. No. e234

253

121 Wolfe KH

Yesterday's polyploids and the mystery of diploidization

NATURE REVIEWS GENETICS. 2001 MAY; 2 (5): 333-341

251

1141 McLysaght A, Hokamp K, Wolfe KH

Extensive genomic duplication during early chordate evolution

NATURE GENETICS. 2002 JUN; 31 (2): 200-204

250

100

333 Bieker JJ

Kruppel-like factors: Three fingers in many pies

JOURNAL OF BIOLOGICAL CHEMISTRY. 2001 SEP 14; 276 (37): 34355-34358

248

The sequence of the human genome (Venter) The papers citing Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, et al. "The sequence of the human genome." SCIENCE. 2001 FEB 16; 291 (5507): 1304	Historiographs	Glossary HistCite Guide About Grand Totals: LCS 18020, GCS 180410, CR 319862 Collection span: 2000 - 2010
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