HistCite - The sequence of the human genome (Venter)

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#	Date / Author / Journal	LCS	GCS	LCR	CR
1	71 Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, et al. The sequence of the human genome SCIENCE. 2001 FEB 16; 291 (5507): 1304-+	5170	5170	2	192
2	64 Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, et al. Initial sequencing and analysis of the human genome NATURE. 2001 FEB 15; 409 (6822): 860-921	3154	7358	1	450
3	1544 Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, et al. Initial sequencing and comparative analysis of the mouse genome NATURE. 2002 DEC 5; 420 (6915): 520-562	462	2474	29	331
4	2953 Collins FS, Lander ES, Rogers J, Waterston RH, Int Human Genome Sequencing Conso Finishing the euchromatic sequence of the human genome NATURE. 2004 OCT 21; 431 (7011): 931-945	167	901	18	71
5	2672 Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution NATURE. 2004 APR 1; 428 (6982): 493-521	118	752	32	226
6	3489 Altshuler D, Brooks LD, Chakravarti A, Collins FS, Daly MJ, et al. A haplotype map of the human genome NATURE. 2005 OCT 27; 437 (7063): 1299-1320	116	1927	10	103
7	1299 Aparicio S, Chapman J, Stupka E, Putnam N, Chia J, et al. Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes SCIENCE. 2002 AUG 23; 297 (5585): 1301-1310	108	720	4	97
8	1174 Gabriel SB, Schaffner SF, Nguyen H, Moore JM, Roy J, et al. The structure of haplotype blocks in the human genome SCIENCE. 2002 JUN 21; 296 (5576): 2225-2229	97	1971	1	32
9	269 Hogenesch JB, Ching KA, Batalov S, Su AI, Walker JR, et al. A comparison of the Celera and Ensembl predicted gene sets reveals little overlap in novel genes CELL. 2001 AUG 24; 106 (4): 413-415	95	142	2	16
10	2351 Gibbs RA, Belmont JW, Hardenbol P, Willis TD, Yu FL, et al. The International HapMap Project NATURE. 2003 DEC 18; 426 (6968): 789-796	89	1480	5	68
#	Date / Author / Journal	LCS	GCS	LCR	CR
11	1401 Holt RA, Subramanian GM, Halpern A, Sutton GG, Charlab R, et al. The genome sequence of the malaria mosquito Anopheles gambiae SCIENCE. 2002 OCT 4; 298 (5591): 129-+	77	827	3	52
12	1545 Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, et al. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs NATURE. 2002 DEC 5; 420 (6915): 563-573	75	619	12	52
13	753 Modrek B, Lee C A genomic view of alternative splicing NATURE GENETICS. 2002 JAN; 30 (1): 13-19	68	609	2	39
14	1005 Goff SA, Ricke D, Lan TH, Presting G, Wang RL, et al. A draft sequence of the rice genome (Oryza sativa L. ssp japonica) SCIENCE. 2002 APR 5; 296 (5565): 92-100	67	1195	3	94
15	1004 Yu J, Hu SN, Wang J, Wong GKS, Li SG, et al. A draft sequence of the rice genome (Oryza sativa L. ssp indica) SCIENCE. 2002 APR 5; 296 (5565): 79-92	64	1171	4	109
16	1549 Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, et al. The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins SCIENCE. 2002 DEC 13; 298 (5601): 2157-2167	63	709	4	90
17	1284 Bailey JA, Gu ZP, Clark RA, Reinert K, Samonte RV, et al. Recent segmental duplications in the human genome SCIENCE. 2002 AUG 9; 297 (5583): 1003-1007	61	488	6	25
18	1093 Mural RJ, Adams MD, Myers EW, Smith HO, Miklos GLG, et al. A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome SCIENCE. 2002 MAY 31; 296 (5573): 1661-1671	59	184	4	56
19	1833 Botstein D, Risch N Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease NATURE GENETICS. 2003 MAR; 33: 228-237	58	530	5	78
20	1546 Manning G, Whyte DB, Martinez R, Hunter T, Sudarsanam S The protein kinase complement of the human genome SCIENCE. 2002 DEC 6; 298 (5600): 1912-+	57	1587	4	36
#	Date / Author / Journal	LCS	GCS	LCR	CR
21	1326 Hopkins AL, Groom CR The druggable genome NATURE REVIEWS DRUG DISCOVERY. 2002 SEP; 1 (9): 727-730	52	628	4	15
22	553 Syvanen AC Accessing genetic variation: Genotyping single nucleotide polymorphisms NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 930-942	51	372	2	138
23	67 Claverie JM Gene number - What if there are only 30,000 human genes? SCIENCE. 2001 FEB 16; 291 (5507): 1255-1257	49	126	1	20
24	869 Wood V, Gwilliam R, Rajandream MA, Lyne M, Lyne R, et al. The genome sequence of Schizosaccharomyces pombe NATURE. 2002 FEB 21; 415 (6874): 871-880	49	620	2	78
25	1555 Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, et al. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 DEC 24; 99 (26): 16899-16903	49	801	4	18
26	205 Dehal P, Predki P, Olsen AS, Kobayashi A, Folta P, et al. Human chromosome 19 and related regions in mouse: Conservative and lineage-specific evolution SCIENCE. 2001 JUL 6; 293 (5527): 104-111	47	151	2	35
27	2956 Feingold EA, Good PJ, Guyer MS, Kamholz S, Liefer L, et al. The ENCODE (ENCyclopedia of DNA elements) Project SCIENCE. 2004 OCT 22; 306 (5296): 636-640	46	365	11	28
28	1059 Saha S, Sparks AB, Rago C, Akmaev V, Wang CJ, et al. Using the transcriptome to annotate the genome NATURE BIOTECHNOLOGY. 2002 MAY; 20 (5): 508-512	43	312	2	19
29	582 Deloukas P, Matthews LH, Ashurst J, Burton J, Gilbert JGR, et al. The DNA sequence and comparative analysis of human chromosome 20 NATURE. 2001 DEC 20; 414 (6866): 865-U3	42	115	2	38
30	2593 Kampa D, Cheng J, Kapranov P, Yamanaka M, Brubaker S, et al. Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22 GENOME RESEARCH. 2004 MAR; 14 (3): 331-342	39	276	7	34
#	Date / Author / Journal	LCS	GCS	LCR	CR
31	4274 Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project NATURE. 2007 JUN 14; 447 (7146): 799-816	39	671	25	128
32	2495 Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, et al. Complete sequencing and characterization of 21,243 full-length human cDNAs NATURE GENETICS. 2004 JAN; 36 (1): 40-45	37	269	4	29
33	2737 Bejerano G, Pheasant M, Makunin I, Stephen S, Kent WJ, et al. Ultraconserved elements in the human genome SCIENCE. 2004 MAY 28; 304 (5675): 1321-1325	37	374	8	37
34	1291 Gregory SG, Sekhon M, Schein J, Zhao SY, Osoegawa K, et al. A physical map of the mouse genome NATURE. 2002 AUG 15; 418 (6899): 743-U3	36	179	6	50
35	2578 Cawley S, Bekiranov S, Ng HH, Kapranov P, Sekinger EA, et al. Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs CELL. 2004 FEB 20; 116 (4): 499-509	36	545	9	49
36	3554 Lindblad-Toh K, Wade CM, Mikkelsen TS, Karlsson EK, Jaffe DB, et al. Genome sequence, comparative analysis and haplotype structure of the domestic dog NATURE. 2005 DEC 8; 438 (7069): 803-819	36	470	21	119
37	820 Harrison PM, Hegyi H, Balasubramanian S, Luscombe NM, Bertone P, et al. Molecular fossils in the human genome: Identification and analysis of the pseudogenes in chromosomes 21 and 22 GENOME RESEARCH. 2002 FEB; 12 (2): 272-280	35	111	3	32
38	1141 McLysaght A, Hokamp K, Wolfe KH Extensive genomic duplication during early chordate evolution NATURE GENETICS. 2002 JUN; 31 (2): 200-204	34	250	8	31
39	2215 Kirkness EF, Bafna V, Halpern AL, Levy S, Remington K, et al. The dog genome: Survey sequencing and comparative analysis SCIENCE. 2003 SEP 26; 301 (5641): 1898-1903	34	228	4	29
40	15 Ideker T, Galitski T, Hood L A new approach to decoding life: Systems biology ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS. 2001; 2: 343-372	33	426	2	142
#	Date / Author / Journal	LCS	GCS	LCR	CR
41	754 Brett D, Pospisil H, Valcarcel J, Reich J, Bork P Alternative splicing and genome complexity NATURE GENETICS. 2002 JAN; 30 (1): 29-30	33	212	2	12
42	1467 Guttmacher AE, Collins FS Genomic medicine - A primer NEW ENGLAND JOURNAL OF MEDICINE. 2002 NOV 7; 347 (19): 1512-1520	33	201	3	42
43	70 Olivier M, Aggarwal A, Allen J, Almendras AA, Bajorek ES, et al. A high-resolution radiation hybrid map of the human genome draft sequence SCIENCE. 2001 FEB 16; 291 (5507): 1298-+	32	63	2	23
44	1296 Schroder ARW, Shinn P, Chen HM, Berry C, Ecker JR, et al. HIV-1 integration in the human genome favors active genes and local hotspots CELL. 2002 AUG 23; 110 (4): 521-529	32	514	2	54
45	936 Waterston RH, Lander ES, Sulston JE On the sequencing of the human genome PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 MAR 19; 99 (6): 3712-3716	31	51	2	13
46	2576 Istrail S, Sutton GG, Florea L, Halpern AL, Mobarry CM, et al. Whole-genome shotgun assembly and comparison of human genome assemblies PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 FEB 17; 101 (7): 1916-1921	31	63	11	31
47	116 Yeh RF, Lim LP, Burge CB Computational inference of homologous gene structures in the human genome GENOME RESEARCH. 2001 MAY; 11 (5): 803-816	30	161	2	33
48	3311 Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, et al. Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution SCIENCE. 2005 MAY 20; 308 (5725): 1149-1154	30	346	13	35
49	549 Davuluri RV, Grosse I, Zhang MQ Computational identification of promoters and first exons in the human genome NATURE GENETICS. 2001 DEC; 29 (4): 412-417	29	200	3	24
50	1793 Rinn JL, Euskirchen G, Bertone P, Martone R, Luscombe NM, et al. The transcriptional activity of human Chromosome 22 GENES & DEVELOPMENT. 2003 FEB 15; 17 (4): 529-540	29	125	5	27
#	Date / Author / Journal	LCS	GCS	LCR	CR
51	66 Nadeau JH, Balling R, Barsh G, Beier D, Brown SDM, et al. Sequence interpretation - Functional annotation of mouse genome sequences SCIENCE. 2001 FEB 16; 291 (5507): 1251-+	28	90	2	14
52	756 Samonte RV, Eichler EE Segmental duplications and the evolution of the primate genome NATURE REVIEWS GENETICS. 2002 JAN; 3 (1): 65-72	28	201	3	58
53	552 Eddy SR Non-coding RNA genes and the modern RNA world NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 919-929	27	382	3	129
54	768 Bird A DNA methylation patterns and epigenetic memory GENES & DEVELOPMENT. 2002 JAN 1; 16 (1): 6-21	27	1224	4	202
55	1060 Tabor HK, Risch NJ, Myers RM Candidate-gene approaches for studying complex genetic traits: practical considerations NATURE REVIEWS GENETICS. 2002 MAY; 3 (5): 391-A396	27	297	7	60
56	59 Baltimore D Our genome unveiled NATURE. 2001 FEB 15; 409 (6822): 814-816	26	120	3	5
57	159 Venter JC The sequence of the human genome (vol 292, pg 1304, 2001) SCIENCE. 2001 JUN 8; 292 (5523): 1838-1838	26	43	1	1
58	442 Mattick JS Non-coding RNAs: the architects of eukaryotic complexity EMBO REPORTS. 2001 NOV; 2 (11): 986-991	26	177	2	80
59	842 Stankiewicz P, Lupski JR Genome architecture, rearrangements and genomic disorders TRENDS IN GENETICS. 2002 FEB; 18 (2): 74-82	26	337	5	83
60	1142 Gu X, Wang YF, Gu JY Age distribution of human gene families shows significant roles of both large-and small-scale duplications in vertebrate evolution NATURE GENETICS. 2002 JUN; 31 (2): 205-209	26	152	5	30
#	Date / Author / Journal	LCS	GCS	LCR	CR
61	1736 Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, et al. Systematic functional analysis of the Caenorhabditis elegans genome using RNAi NATURE. 2003 JAN 16; 421 (6920): 231-237	26	1011	3	40
62	472 Eichler EE Recent duplication, domain accretion and the dynamic mutation of the human genome TRENDS IN GENETICS. 2001 NOV; 17 (11): 661-669	25	162	3	69
63	862 Wise A, Gearing K, Rees S Target validation of G-protein coupled receptors DRUG DISCOVERY TODAY. 2002 FEB 15; 7 (4): 235-246	25	166	2	84
64	1699 Jaffe DB, Butler J, Gnerre S, Mauceli E, Lindblad-Toh K, et al. Whole-genome sequence assembly for mammalian genomes: Arachne 2 GENOME RESEARCH. 2003 JAN; 13 (1): 91-96	25	91	6	17
65	2683 Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, et al. A gene atlas of the mouse and human protein-encoding transcriptomes PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 APR 20; 101 (16): 6062-6067	25	820	7	36
66	121 Wolfe KH Yesterday's polyploids and the mystery of diploidization NATURE REVIEWS GENETICS. 2001 MAY; 2 (5): 333-341	24	251	2	66
67	492 Subramanian G, Adams MD, Venter JC, Broder S Implications of the human genome for understanding human biology and medicine JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION. 2001 NOV 14; 286 (18): 2296-2307	24	65	6	159
68	983 Cartegni L, Chew SL, Krainer AR Listening to silence and understanding nonsense: Exonic mutations that affect splicing NATURE REVIEWS GENETICS. 2002 APR; 3 (4): 285-298	24	781	4	149
69	1002 Su AI, Cooke MP, Ching KA, Hakak Y, Walker JR, et al. Large-scale analysis of the human and mouse transcriptomes PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 APR 2; 99 (7): 4465-4470	24	697	2	25
70	1920 Galagan JE, Calvo SE, Borkovich KA, Selker EU, Read ND, et al. The genome sequence of the filamentous fungus Neurospora crassa NATURE. 2003 APR 24; 422 (6934): 859-868	24	489	1	72
#	Date / Author / Journal	LCS	GCS	LCR	CR
71	3043 Bertone P, Stolc V, Royce TE, Rozowsky JS, Urban AE, et al. Global identification of human transcribed sequences with genome tiling arrays SCIENCE. 2004 DEC 24; 306 (5705): 2242-2246	24	266	7	21
72	260 Pevzner PA, Tang HX, Waterman MS An Eulerian path approach to DNA fragment assembly PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2001 AUG 14; 98 (17): 9748-9753	23	97	2	27
73	406 Camargo AA, Samaia HPB, Dias-Neto E, Simao DF, Migotto IA, et al. The contribution of 700,000 ORF sequence tags to the definition of the human transcriptome PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2001 OCT 9; 98 (21): 12103-12108	23	82	2	20
74	2952 She XW, Jiang ZX, Clark RL, Liu G, Cheng Z, et al. Shotgun sequence assembly and recent segmental duplications within the human genome NATURE. 2004 OCT 21; 431 (7011): 927-930	23	97	10	23
75	3201 Hirschhorn JN, Daly MJ Genome-wide association studies for common diseases and complex traits NATURE REVIEWS GENETICS. 2005 FEB; 6 (2): 95-108	22	399	14	138
76	63 Aach J, Bulyk ML, Church GM, Comander J, Derti A, et al. Computational comparison of two draft sequences of the human genome NATURE. 2001 FEB 15; 409 (6822): 856-859	21	31	2	20
77	1698 Mullikin JC, Ning ZM The phusion assembler GENOME RESEARCH. 2003 JAN; 13 (1): 81-90	21	64	7	21
78	1913 Vassilatis DK, Hohmann JG, Zeng H, Li FS, Ranchalis JE, et al. The G protein-coupled receptor repertoires of human and mouse PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 APR 15; 100 (8): 4903-4908	21	203	5	35
79	2468 Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, et al. Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium AMERICAN JOURNAL OF HUMAN GENETICS. 2004 JAN; 74 (1): 106-120	21	643	5	41
80	2714 Shendure J, Mitra RD, Varma C, Church GM Advanced sequencing technologies: Methods and goals NATURE REVIEWS GENETICS. 2004 MAY; 5 (5): 335-344	21	202	10	107
#	Date / Author / Journal	LCS	GCS	LCR	CR
81	4772 Wang J, Wang W, Li RQ, Li YR, Tian G, et al. The diploid genome sequence of an Asian individual NATURE. 2008 NOV 6; 456 (7218): 60-U1	21	95	3	20
82	928 Harrison PM, Kumar A, Lang N, Snyder M, Gerstein M A question of size: the eukaryotic proteome and the problems in defining it NUCLEIC ACIDS RESEARCH. 2002 MAR 1; 30 (5): 1083-1090	20	84	6	80
83	1160 Delcher AL, Phillippy A, Carlton J, Salzberg SL Fast algorithms for large-scale genome alignment and comparison NUCLEIC ACIDS RESEARCH. 2002 JUN 1; 30 (11): 2478-2483	20	173	1	20
84	1228 Maniatis T, Tasic B Alternative pre-mRNA splicing and proteome expansion in metazoans NATURE. 2002 JUL 11; 418 (6894): 236-243	20	349	12	96
85	1904 Braslavsky I, Hebert B, Kartalov E, Quake SR Sequence information can be obtained from single DNA molecules PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 APR 1; 100 (7): 3960-3964	20	131	2	36
86	3700 Feuk L, Carson AR, Scherer SW Structural variation in the human genome NATURE REVIEWS GENETICS. 2006 FEB; 7 (2): 85-97	20	323	11	113
87	306 Mattick JS, Gagen MJ The evolution of controlled multitasked gene networks: The role of introns and other noncoding RNAs in the development of complex organisms MOLECULAR BIOLOGY AND EVOLUTION. 2001 SEP; 18 (9): 1611-1630	19	129	2	278
88	1161 Takeda S, Kadowaki S, Haga T, Takaesu H, Mitaku S Identification of G protein-coupled receptor genes from the human genome sequence FEBS LETTERS. 2002 JUN 5; 520 (1-3): 97-101	19	124	2	19
89	240 Green ED Strategies for the systematic sequencing of complex genomes NATURE REVIEWS GENETICS. 2001 AUG; 2 (8): 573-583	18	60	4	102
90	723 Bailey JA, Yavor AM, Viggiano L, Misceo D, Horvath JE, et al. Human-specific duplication and mosaic transcripts: The recent paralogous structure of chromosome 22 AMERICAN JOURNAL OF HUMAN GENETICS. 2002 JAN; 70 (1): 83-100	18	109	4	61
#	Date / Author / Journal	LCS	GCS	LCR	CR
91	778 Suzuki Y, Yamashita R, Nakai K, Sugano S DBTSS: DataBase of human transcriptional start sites and full-length cDNAs NUCLEIC ACIDS RESEARCH. 2002 JAN 1; 30 (1): 328-331	18	126	2	13
92	1001 Myers EW, Sutton GG, Smith HO, Adams MD, Venter JC On the sequencing and assembly of the human genome PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 APR 2; 99 (7): 4145-4146	18	24	3	7
93	1695 Collins JE, Goward ME, Cole CG, Smink LJ, Huckle EJ, et al. Reevaluating human gene annotation: A second-generation analysis of chromosome 22 GENOME RESEARCH. 2003 JAN; 13 (1): 27-36	18	54	8	53
94	1786 Heilig R, Eckenberg R, Petit JL, Fonknechten NR, Da Silva C, et al. The DNA sequence and analysis of human chromosome 14 NATURE. 2003 FEB 6; 421 (6923): 601-U1	18	51	8	39
95	1888 Ureta-Vidal A, Ettwiller L, Birney E Comparative genomics: Genome-wide analysis in metazoan eukaryotes NATURE REVIEWS GENETICS. 2003 APR; 4 (4): 251-262	18	117	18	100
96	1969 Scherer SW, Cheung J, MacDonald JR, Osborne LR, Nakabayashi K, et al. Human chromosome 7: DNA sequence and biology SCIENCE. 2003 MAY 2; 300 (5620): 767-772	18	95	9	31
97	2052 Skaletsky H, Kuroda-Kawaguchi T, Minx PJ, Cordum HS, Hillier L, et al. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes NATURE. 2003 JUN 19; 423 (6942): 825-U2	18	506	7	50
98	2641 Blanchette M, Kent WJ, Riemer C, Elnitski L, Smit AFA, et al. Aligning multiple genomic sequences with the threaded blockset aligner GENOME RESEARCH. 2004 APR; 14 (4): 708-715	18	311	4	26
99	150 Collins T, Stone JR, Williams AJ All in the family: the BTB/POZ, KRAB, and SCAN domains MOLECULAR AND CELLULAR BIOLOGY. 2001 JUN; 21 (11): 3609-3615	17	172	1	56
100	152 Vitkup D, Melamud E, Moult J, Sander C Completeness in structural genomics NATURE STRUCTURAL BIOLOGY. 2001 JUN; 8 (6): 559-566	17	200	2	51

Date / Author / Journal

LCS

GCS

LCR

71 Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, et al.

The sequence of the human genome

SCIENCE. 2001 FEB 16; 291 (5507): 1304-+

5170

192

64 Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, et al.

Initial sequencing and analysis of the human genome

NATURE. 2001 FEB 15; 409 (6822): 860-921

3154

7358

450

1544 Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, et al.

Initial sequencing and comparative analysis of the mouse genome

NATURE. 2002 DEC 5; 420 (6915): 520-562

462

2474

331

2953 Collins FS, Lander ES, Rogers J, Waterston RH, Int Human Genome Sequencing Conso

Finishing the euchromatic sequence of the human genome

NATURE. 2004 OCT 21; 431 (7011): 931-945

167

901

2672 Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, et al.

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

NATURE. 2004 APR 1; 428 (6982): 493-521

118

752

226

3489 Altshuler D, Brooks LD, Chakravarti A, Collins FS, Daly MJ, et al.

A haplotype map of the human genome

NATURE. 2005 OCT 27; 437 (7063): 1299-1320

116

1927

103

1299 Aparicio S, Chapman J, Stupka E, Putnam N, Chia J, et al.

Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes

SCIENCE. 2002 AUG 23; 297 (5585): 1301-1310

108

720

1174 Gabriel SB, Schaffner SF, Nguyen H, Moore JM, Roy J, et al.

The structure of haplotype blocks in the human genome

SCIENCE. 2002 JUN 21; 296 (5576): 2225-2229

1971

269 Hogenesch JB, Ching KA, Batalov S, Su AI, Walker JR, et al.

A comparison of the Celera and Ensembl predicted gene sets reveals little overlap in novel genes

CELL. 2001 AUG 24; 106 (4): 413-415

142

2351 Gibbs RA, Belmont JW, Hardenbol P, Willis TD, Yu FL, et al.

The International HapMap Project

NATURE. 2003 DEC 18; 426 (6968): 789-796

1480

Date / Author / Journal

LCS

GCS

LCR

1401 Holt RA, Subramanian GM, Halpern A, Sutton GG, Charlab R, et al.

The genome sequence of the malaria mosquito Anopheles gambiae

SCIENCE. 2002 OCT 4; 298 (5591): 129-+

827

1545 Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, et al.

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

NATURE. 2002 DEC 5; 420 (6915): 563-573

619

753 Modrek B, Lee C

A genomic view of alternative splicing

NATURE GENETICS. 2002 JAN; 30 (1): 13-19

609

1005 Goff SA, Ricke D, Lan TH, Presting G, Wang RL, et al.

A draft sequence of the rice genome (Oryza sativa L. ssp japonica)

SCIENCE. 2002 APR 5; 296 (5565): 92-100

1195

1004 Yu J, Hu SN, Wang J, Wong GKS, Li SG, et al.

A draft sequence of the rice genome (Oryza sativa L. ssp indica)

SCIENCE. 2002 APR 5; 296 (5565): 79-92

1171

109

1549 Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, et al.

The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins

SCIENCE. 2002 DEC 13; 298 (5601): 2157-2167

709

1284 Bailey JA, Gu ZP, Clark RA, Reinert K, Samonte RV, et al.

Recent segmental duplications in the human genome

SCIENCE. 2002 AUG 9; 297 (5583): 1003-1007

488

1093 Mural RJ, Adams MD, Myers EW, Smith HO, Miklos GLG, et al.

A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome

SCIENCE. 2002 MAY 31; 296 (5573): 1661-1671

184

1833 Botstein D, Risch N

Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease

NATURE GENETICS. 2003 MAR; 33: 228-237

530

1546 Manning G, Whyte DB, Martinez R, Hunter T, Sudarsanam S

The protein kinase complement of the human genome

SCIENCE. 2002 DEC 6; 298 (5600): 1912-+

1587

Date / Author / Journal

LCS

GCS

LCR

1326 Hopkins AL, Groom CR

The druggable genome

NATURE REVIEWS DRUG DISCOVERY. 2002 SEP; 1 (9): 727-730

628

553 Syvanen AC

Accessing genetic variation: Genotyping single nucleotide polymorphisms

NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 930-942

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67 Claverie JM

Gene number - What if there are only 30,000 human genes?

SCIENCE. 2001 FEB 16; 291 (5507): 1255-1257

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869 Wood V, Gwilliam R, Rajandream MA, Lyne M, Lyne R, et al.

The genome sequence of Schizosaccharomyces pombe

NATURE. 2002 FEB 21; 415 (6874): 871-880

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1555 Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, et al.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 DEC 24; 99 (26): 16899-16903

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205 Dehal P, Predki P, Olsen AS, Kobayashi A, Folta P, et al.

Human chromosome 19 and related regions in mouse: Conservative and lineage-specific evolution

SCIENCE. 2001 JUL 6; 293 (5527): 104-111

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2956 Feingold EA, Good PJ, Guyer MS, Kamholz S, Liefer L, et al.

The ENCODE (ENCyclopedia of DNA elements) Project

SCIENCE. 2004 OCT 22; 306 (5296): 636-640

365

1059 Saha S, Sparks AB, Rago C, Akmaev V, Wang CJ, et al.

Using the transcriptome to annotate the genome

NATURE BIOTECHNOLOGY. 2002 MAY; 20 (5): 508-512

312

582 Deloukas P, Matthews LH, Ashurst J, Burton J, Gilbert JGR, et al.

The DNA sequence and comparative analysis of human chromosome 20

NATURE. 2001 DEC 20; 414 (6866): 865-U3

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2593 Kampa D, Cheng J, Kapranov P, Yamanaka M, Brubaker S, et al.

Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

GENOME RESEARCH. 2004 MAR; 14 (3): 331-342

276

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4274 Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, et al.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

NATURE. 2007 JUN 14; 447 (7146): 799-816

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2495 Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, et al.

Complete sequencing and characterization of 21,243 full-length human cDNAs

NATURE GENETICS. 2004 JAN; 36 (1): 40-45

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2737 Bejerano G, Pheasant M, Makunin I, Stephen S, Kent WJ, et al.

Ultraconserved elements in the human genome

SCIENCE. 2004 MAY 28; 304 (5675): 1321-1325

374

1291 Gregory SG, Sekhon M, Schein J, Zhao SY, Osoegawa K, et al.

A physical map of the mouse genome

NATURE. 2002 AUG 15; 418 (6899): 743-U3

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2578 Cawley S, Bekiranov S, Ng HH, Kapranov P, Sekinger EA, et al.

Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

CELL. 2004 FEB 20; 116 (4): 499-509

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3554 Lindblad-Toh K, Wade CM, Mikkelsen TS, Karlsson EK, Jaffe DB, et al.

Genome sequence, comparative analysis and haplotype structure of the domestic dog

NATURE. 2005 DEC 8; 438 (7069): 803-819

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820 Harrison PM, Hegyi H, Balasubramanian S, Luscombe NM, Bertone P, et al.

Molecular fossils in the human genome: Identification and analysis of the pseudogenes in chromosomes 21 and 22

GENOME RESEARCH. 2002 FEB; 12 (2): 272-280

111

1141 McLysaght A, Hokamp K, Wolfe KH

Extensive genomic duplication during early chordate evolution

NATURE GENETICS. 2002 JUN; 31 (2): 200-204

250

2215 Kirkness EF, Bafna V, Halpern AL, Levy S, Remington K, et al.

The dog genome: Survey sequencing and comparative analysis

SCIENCE. 2003 SEP 26; 301 (5641): 1898-1903

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15 Ideker T, Galitski T, Hood L

A new approach to decoding life: Systems biology

ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS. 2001; 2: 343-372

426

142

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754 Brett D, Pospisil H, Valcarcel J, Reich J, Bork P

Alternative splicing and genome complexity

NATURE GENETICS. 2002 JAN; 30 (1): 29-30

212

1467 Guttmacher AE, Collins FS

Genomic medicine - A primer

NEW ENGLAND JOURNAL OF MEDICINE. 2002 NOV 7; 347 (19): 1512-1520

201

70 Olivier M, Aggarwal A, Allen J, Almendras AA, Bajorek ES, et al.

A high-resolution radiation hybrid map of the human genome draft sequence

SCIENCE. 2001 FEB 16; 291 (5507): 1298-+

1296 Schroder ARW, Shinn P, Chen HM, Berry C, Ecker JR, et al.

HIV-1 integration in the human genome favors active genes and local hotspots

CELL. 2002 AUG 23; 110 (4): 521-529

514

936 Waterston RH, Lander ES, Sulston JE

On the sequencing of the human genome

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 MAR 19; 99 (6): 3712-3716

2576 Istrail S, Sutton GG, Florea L, Halpern AL, Mobarry CM, et al.

Whole-genome shotgun assembly and comparison of human genome assemblies

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 FEB 17; 101 (7): 1916-1921

116 Yeh RF, Lim LP, Burge CB

Computational inference of homologous gene structures in the human genome

GENOME RESEARCH. 2001 MAY; 11 (5): 803-816

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3311 Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, et al.

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

SCIENCE. 2005 MAY 20; 308 (5725): 1149-1154

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549 Davuluri RV, Grosse I, Zhang MQ

Computational identification of promoters and first exons in the human genome

NATURE GENETICS. 2001 DEC; 29 (4): 412-417

200

1793 Rinn JL, Euskirchen G, Bertone P, Martone R, Luscombe NM, et al.

The transcriptional activity of human Chromosome 22

GENES & DEVELOPMENT. 2003 FEB 15; 17 (4): 529-540

125

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66 Nadeau JH, Balling R, Barsh G, Beier D, Brown SDM, et al.

Sequence interpretation - Functional annotation of mouse genome sequences

SCIENCE. 2001 FEB 16; 291 (5507): 1251-+

756 Samonte RV, Eichler EE

Segmental duplications and the evolution of the primate genome

NATURE REVIEWS GENETICS. 2002 JAN; 3 (1): 65-72

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552 Eddy SR

Non-coding RNA genes and the modern RNA world

NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 919-929

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768 Bird A

DNA methylation patterns and epigenetic memory

GENES & DEVELOPMENT. 2002 JAN 1; 16 (1): 6-21

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1060 Tabor HK, Risch NJ, Myers RM

Candidate-gene approaches for studying complex genetic traits: practical considerations

NATURE REVIEWS GENETICS. 2002 MAY; 3 (5): 391-A396

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59 Baltimore D

Our genome unveiled

NATURE. 2001 FEB 15; 409 (6822): 814-816

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159 Venter JC

The sequence of the human genome (vol 292, pg 1304, 2001)

SCIENCE. 2001 JUN 8; 292 (5523): 1838-1838

442 Mattick JS

Non-coding RNAs: the architects of eukaryotic complexity

EMBO REPORTS. 2001 NOV; 2 (11): 986-991

177

842 Stankiewicz P, Lupski JR

Genome architecture, rearrangements and genomic disorders

TRENDS IN GENETICS. 2002 FEB; 18 (2): 74-82

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1142 Gu X, Wang YF, Gu JY

Age distribution of human gene families shows significant roles of both large-and small-scale duplications in vertebrate evolution

NATURE GENETICS. 2002 JUN; 31 (2): 205-209

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1736 Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, et al.

Systematic functional analysis of the Caenorhabditis elegans genome using RNAi

NATURE. 2003 JAN 16; 421 (6920): 231-237

1011

472 Eichler EE

Recent duplication, domain accretion and the dynamic mutation of the human genome

TRENDS IN GENETICS. 2001 NOV; 17 (11): 661-669

162

862 Wise A, Gearing K, Rees S

Target validation of G-protein coupled receptors

DRUG DISCOVERY TODAY. 2002 FEB 15; 7 (4): 235-246

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1699 Jaffe DB, Butler J, Gnerre S, Mauceli E, Lindblad-Toh K, et al.

Whole-genome sequence assembly for mammalian genomes: Arachne 2

GENOME RESEARCH. 2003 JAN; 13 (1): 91-96

2683 Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, et al.

A gene atlas of the mouse and human protein-encoding transcriptomes

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 APR 20; 101 (16): 6062-6067

820

121 Wolfe KH

Yesterday's polyploids and the mystery of diploidization

NATURE REVIEWS GENETICS. 2001 MAY; 2 (5): 333-341

251

492 Subramanian G, Adams MD, Venter JC, Broder S

Implications of the human genome for understanding human biology and medicine

JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION. 2001 NOV 14; 286 (18): 2296-2307

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983 Cartegni L, Chew SL, Krainer AR

Listening to silence and understanding nonsense: Exonic mutations that affect splicing

NATURE REVIEWS GENETICS. 2002 APR; 3 (4): 285-298

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1002 Su AI, Cooke MP, Ching KA, Hakak Y, Walker JR, et al.

Large-scale analysis of the human and mouse transcriptomes

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 APR 2; 99 (7): 4465-4470

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1920 Galagan JE, Calvo SE, Borkovich KA, Selker EU, Read ND, et al.

The genome sequence of the filamentous fungus Neurospora crassa

NATURE. 2003 APR 24; 422 (6934): 859-868

489

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3043 Bertone P, Stolc V, Royce TE, Rozowsky JS, Urban AE, et al.

Global identification of human transcribed sequences with genome tiling arrays

SCIENCE. 2004 DEC 24; 306 (5705): 2242-2246

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260 Pevzner PA, Tang HX, Waterman MS

An Eulerian path approach to DNA fragment assembly

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2001 AUG 14; 98 (17): 9748-9753

406 Camargo AA, Samaia HPB, Dias-Neto E, Simao DF, Migotto IA, et al.

The contribution of 700,000 ORF sequence tags to the definition of the human transcriptome

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2001 OCT 9; 98 (21): 12103-12108

2952 She XW, Jiang ZX, Clark RL, Liu G, Cheng Z, et al.

Shotgun sequence assembly and recent segmental duplications within the human genome

NATURE. 2004 OCT 21; 431 (7011): 927-930

3201 Hirschhorn JN, Daly MJ

Genome-wide association studies for common diseases and complex traits

NATURE REVIEWS GENETICS. 2005 FEB; 6 (2): 95-108

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63 Aach J, Bulyk ML, Church GM, Comander J, Derti A, et al.

Computational comparison of two draft sequences of the human genome

NATURE. 2001 FEB 15; 409 (6822): 856-859

1698 Mullikin JC, Ning ZM

The phusion assembler

GENOME RESEARCH. 2003 JAN; 13 (1): 81-90

1913 Vassilatis DK, Hohmann JG, Zeng H, Li FS, Ranchalis JE, et al.

The G protein-coupled receptor repertoires of human and mouse

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 APR 15; 100 (8): 4903-4908

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2468 Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, et al.

Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium

AMERICAN JOURNAL OF HUMAN GENETICS. 2004 JAN; 74 (1): 106-120

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2714 Shendure J, Mitra RD, Varma C, Church GM

Advanced sequencing technologies: Methods and goals

NATURE REVIEWS GENETICS. 2004 MAY; 5 (5): 335-344

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4772 Wang J, Wang W, Li RQ, Li YR, Tian G, et al.

The diploid genome sequence of an Asian individual

NATURE. 2008 NOV 6; 456 (7218): 60-U1

928 Harrison PM, Kumar A, Lang N, Snyder M, Gerstein M

A question of size: the eukaryotic proteome and the problems in defining it

NUCLEIC ACIDS RESEARCH. 2002 MAR 1; 30 (5): 1083-1090

1160 Delcher AL, Phillippy A, Carlton J, Salzberg SL

Fast algorithms for large-scale genome alignment and comparison

NUCLEIC ACIDS RESEARCH. 2002 JUN 1; 30 (11): 2478-2483

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1228 Maniatis T, Tasic B

Alternative pre-mRNA splicing and proteome expansion in metazoans

NATURE. 2002 JUL 11; 418 (6894): 236-243

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1904 Braslavsky I, Hebert B, Kartalov E, Quake SR

Sequence information can be obtained from single DNA molecules

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 APR 1; 100 (7): 3960-3964

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3700 Feuk L, Carson AR, Scherer SW

Structural variation in the human genome

NATURE REVIEWS GENETICS. 2006 FEB; 7 (2): 85-97

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306 Mattick JS, Gagen MJ

The evolution of controlled multitasked gene networks: The role of introns and other noncoding RNAs in the development of complex organisms

MOLECULAR BIOLOGY AND EVOLUTION. 2001 SEP; 18 (9): 1611-1630

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1161 Takeda S, Kadowaki S, Haga T, Takaesu H, Mitaku S

Identification of G protein-coupled receptor genes from the human genome sequence

FEBS LETTERS. 2002 JUN 5; 520 (1-3): 97-101

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240 Green ED

Strategies for the systematic sequencing of complex genomes

NATURE REVIEWS GENETICS. 2001 AUG; 2 (8): 573-583

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723 Bailey JA, Yavor AM, Viggiano L, Misceo D, Horvath JE, et al.

Human-specific duplication and mosaic transcripts: The recent paralogous structure of chromosome 22

AMERICAN JOURNAL OF HUMAN GENETICS. 2002 JAN; 70 (1): 83-100

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778 Suzuki Y, Yamashita R, Nakai K, Sugano S

DBTSS: DataBase of human transcriptional start sites and full-length cDNAs

NUCLEIC ACIDS RESEARCH. 2002 JAN 1; 30 (1): 328-331

126

1001 Myers EW, Sutton GG, Smith HO, Adams MD, Venter JC

On the sequencing and assembly of the human genome

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 APR 2; 99 (7): 4145-4146

1695 Collins JE, Goward ME, Cole CG, Smink LJ, Huckle EJ, et al.

Reevaluating human gene annotation: A second-generation analysis of chromosome 22

GENOME RESEARCH. 2003 JAN; 13 (1): 27-36

1786 Heilig R, Eckenberg R, Petit JL, Fonknechten NR, Da Silva C, et al.

The DNA sequence and analysis of human chromosome 14

NATURE. 2003 FEB 6; 421 (6923): 601-U1

1888 Ureta-Vidal A, Ettwiller L, Birney E

Comparative genomics: Genome-wide analysis in metazoan eukaryotes

NATURE REVIEWS GENETICS. 2003 APR; 4 (4): 251-262

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100

1969 Scherer SW, Cheung J, MacDonald JR, Osborne LR, Nakabayashi K, et al.

Human chromosome 7: DNA sequence and biology

SCIENCE. 2003 MAY 2; 300 (5620): 767-772

2052 Skaletsky H, Kuroda-Kawaguchi T, Minx PJ, Cordum HS, Hillier L, et al.

The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes

NATURE. 2003 JUN 19; 423 (6942): 825-U2

506

2641 Blanchette M, Kent WJ, Riemer C, Elnitski L, Smit AFA, et al.

Aligning multiple genomic sequences with the threaded blockset aligner

GENOME RESEARCH. 2004 APR; 14 (4): 708-715

311

150 Collins T, Stone JR, Williams AJ

All in the family: the BTB/POZ, KRAB, and SCAN domains

MOLECULAR AND CELLULAR BIOLOGY. 2001 JUN; 21 (11): 3609-3615

172

100

152 Vitkup D, Melamud E, Moult J, Sander C

Completeness in structural genomics

NATURE STRUCTURAL BIOLOGY. 2001 JUN; 8 (6): 559-566

200

The sequence of the human genome (Venter) The papers citing Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, et al. "The sequence of the human genome." SCIENCE. 2001 FEB 16; 291 (5507): 1304	Historiographs	Glossary HistCite Guide About Grand Totals: LCS 18020, GCS 180410, CR 319862 Collection span: 2000 - 2010
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