Page 2 of 4: [  1  2  3  4 ]

#	LCR	NCR	Node / Date / Journal / Author	LCS	GCS
101	1	83	145 2005 EXPERT REVIEW OF PROTEOMICS 2 (1): 27-39 Kislinger T; Emili A Multidimensional protein identification technology: current status and future prospects	0	0
102	1	145	146 2005 FASEB JOURNAL 19 (12): 1602-1616 Mutch DM; Wahli W; Williamson G Nutrigenomics and nutrigenetics: the emerging faces of nutrition	0	4
103	1	54	147 2005 FEBS JOURNAL 272 (19): 4884-4898 Mujica AO; Brauksiepe B; Saaler-Reinhardt S; Reuss S; Schmidt ER Differential expression pattern of the novel serine/threonine kinase, STK33, in mice and men	0	0
104	1	43	22 2004 FEBS LETTERS 573 (1-3): 214-218 Suzuki H; Okunishi R; Hashizume W; Katayama S; Ninomiya N; et al. Identification of region-specific transcription factor genes in the adult mouse brain by medium-scale real-time RT-PCR	0	1
105	1	171	23 2004 FOLIA BIOLOGICA 50 (2): 43-57 Seda O Comparative gene map of hypertriglyceridaemia	0	3
106	1	33	24 2004 GENE 340 (2): 303-312 Grus WE; Zhang JZ Rapid turnover and species-specificity of vomeronasal pheromone receptor genes in mice and rats	4	10
107	1	26	25 2004 GENE 343 (2): 239-244 Leeb T; Muller M Comparative human-mouse-rat sequence analysis of the ICAM gene cluster on HSA 19p13.2 and a 185-kb porcine region from SSC 2q	0	2
108	1	33	148 2005 GENE 345 (1): 113-118 Hancock JM; Simon M Simple sequence repeats in proteins and their significance for network evolution	0	1
109	1	15	149 2005 GENE 346: 23-28 Niimura Y; Nei M Evolutionary changes of the number of olfactory receptor genes in the human and mouse lineages	0	5
110	1	30	150 2005 GENE 346: 51-61 Santini S; Bernardi G Organization and base composition of tilapia Hox genes: implications for the evolution of Hox clusters in fish	0	3
#	LCR	NCR	Node / Date / Journal / Author	LCS	GCS
111	2	77	151 2005 GENE 359: 1-17 Edelstein LC; Collins T The SCAN domain family of zinc finger transcription	0	0
112	2	42	152 2005 GENE 363: 51-60 Makarova JA; Kramerov DA Noncoding RNA of U87 host gene is associated with ribosomes and is relatively resistant to nonsense-mediated decay	0	1
113	2	26	153 2005 GENE 364: 45-52 Fujii Y; Itoh T; Sakate R; Koyanagi KO; Matsuya A; et al. A web tool for comparative genomics: G-compass	0	0
114	3	42	309 2006 GENE 365: 130-136 Noda AO; Ikeo K; Gojobori T Comparative genome analyses of nervous system-specific genes	0	0
115	2	41	310 2006 GENES & DEVELOPMENT 20 (10): 1365-1377 Davey MG; Paton IR; Yin Y; Schmidt M; Bangs FK; et al. The chicken talpid(3) gene encodes a novel protein essential for Hedgehog signaling	0	0
116	1	49	154 2005 GENETICAL RESEARCH 86 (2): 127-138 Anisimov SV A large-scale screening of the normalized mammalian mitochondrial gene expression profiles	0	0
117	1	19	26 2004 GENETICS 168 (2): 1077-1080 Robertson HM Genes encoding vitamin-K epoxide reductase are present in Drosophila and trypanosomatid protists	0	2
118	1	47	155 2005 GENETICS 169 (4): 2179-2188 Wu Q Comparative genomics and diversifying selection of the clustered vertebrate protocadherin genes	0	1
119	1	44	156 2005 GENETICS 170 (4): 1887-1896 Smits BMG; Peters TA; Mul JD; Croes HJ; Fransen JAM; et al. Identification of a rat model for usher syndrome type 1B by N-ethyl-N-nitrosourea mutagenesis-driven forward genetics	1	1
120	1	84	157 2005 GENETICS 171 (3): 1161-1171 Smith JJ; Kump DK; Walker JA; Parichy DM; Voss SR A comprehensive expressed sequence tag linkage map for tiger salamander and Mexican axolotl: enabling gene mapping and comparative genomics in ambystoma	0	1
#	LCR	NCR	Node / Date / Journal / Author	LCS	GCS
121	1	42	311 2006 GENETICS 172 (1): 425-436 Gautier M; Barcelona RR; Fritz S; Grohs C; Druet T; et al. Fine mapping and physical characterization of two linked quantitative trait loci affecting milk fat yield in dairy cattle on BTA26	0	1
122	1	8	27 2004 GENOME BIOLOGY 5 (5): Art. No. 221 Mullins LJ; Mullins JJ Insights from the rat genome sequence	0	4
123	1	49	28 2004 GENOME BIOLOGY 5 (7): Art. No. R47 Huang H; Winter EE; Wang HJ; Weinstock KG; Xing HM; et al. Evolutionary conservation and selection of human disease gene orthologs in the rat and mouse genomes	0	9
124	1	56	29 2004 GENOME BIOLOGY 5 (9): Art. No. R68 Miska EA; Alvarez-Saavedra E; Townsend M; Yoshii A; Sestan N; et al. Microarray analysis of microRNA expression in the developing mammalian brain	0	48
125	2	15	158 2005 GENOME BIOLOGY 6 (2): Art. No. 207 Furlong RF Insights into vertebrate evolution from the chicken genome sequence	0	0
126	2	23	159 2005 GENOME BIOLOGY 6 (4): Art. No. 216 DeCerbo J; Carmichael GG SINEs point to abundant editing in the human genome	0	0
127	4	39	160 2005 GENOME BIOLOGY 6 (7): Art. No. 115 Aloni R; Lancet D Conservation anchors in the vertebrate genome	0	0
128	2	59	161 2005 GENOME BIOLOGY 6 (8): Art. No. r67 Haddrill PR; Charlesworth B; Halligan DL; Andolfatto P Patterns of intron sequence evolution in Drosophila are dependent upon length and GC content	0	9
129	1	42	162 2005 GENOME BIOLOGY 6 (10): Art. No. R83 Quignon P; Giraud M; Rimbault M; Lavigne P; Tacher S; et al. The dog and rat olfactory receptor repertoires	0	2
130	1	35	312 2006 GENOME BIOLOGY 7 (4): Art. No. R33 Mularoni L; Guigo R; Alba MM Mutation patterns of amino acid tandem repeats in the human proteome	0	0
#	LCR	NCR	Node / Date / Journal / Author	LCS	GCS
131	3	64	313 2006 GENOME BIOLOGY 7 (5): Art. No. R43 Blomme T; Vandepoele K; De Bodt S; Simillion C; Maere S; et al. The gain and loss of genes during 600 million years of vertebrate evolution	0	0
132	1	62	30 2004 GENOME RESEARCH 14 (5): 802-811 Castillo-Davis CI; Kondrashov FA; Hartl DL; Kulathinal RJ The functional genomic distribution of protein divergence in two animal phyla: Coevolution, genomic conflict, and constraint	1	12
133	1	27	31 2004 GENOME RESEARCH 14 (5): 976-987 Eyras E; Caccamo M; Curwen V; Clamp M ESTGenes: Alternative splicing from ESTs in Ensembl	3	17
134	1	75	32 2004 GENOME RESEARCH 14 (8): 1516-1529 Emes RD; Riley MC; Laukaitis CM; Goodstadt L; Karn RC; et al. Comparative evolutionary genomics of androgen-binding protein genes	1	4
135	1	22	33 2004 GENOME RESEARCH 14 (8): 1610-1616 Ogurtsov AY; Sunyaev S; Kondrashov AS Indel-based evolutionary distance and mouse-human divergence	1	6
136	1	85	34 2004 GENOME RESEARCH 14 (10B): 2001-2009 Brasch MA; Hartley JL; Vidal M ORFeome cloning and systems biology: Standardized mass production of the parts from the parts-list	0	16
137	1	57	35 2004 GENOME RESEARCH 14 (10B): 2010-2014 Hill DE; Brasch MA; del Campo AA; Doucette-Stamm L; Garrels JI; et al. Academia-industry collaboration: An integral element for building "omic" resources	0	0
138	1	33	36 2004 GENOME RESEARCH 14 (10B): 2121-2127 Gerhard DS; Wagner L; Feingold EA; Shenmen CM; Grouse LH; et al. The status, quality, and expansion of the NIH full-length cDNA project: The Mammalian Gene Collection (MGC)	5	27
139	1	39	37 2004 GENOME RESEARCH 14 (10B): 2128-2135 Rual JF; Hirozane-Kishikawa T; Hao T; Bertin N; Li SM; et al. Human ORFeome version 1.1: A platform for reverse proteomics	1	12
140	1	62	38 2004 GENOME RESEARCH 14 (10A): 1851-1860 Zhao SY; Shetty J; Hou LH; Delcher A; Zhu BL; et al. Human, mouse, and rat genome large-scale rearrangements: Stability versus speciation	4	9
#	LCR	NCR	Node / Date / Journal / Author	LCS	GCS
141	2	50	39 2004 GENOME RESEARCH 14 (11): 2235-2244 Blakesley RW; Hansen NF; Mullikin JC; Thomas PJ; McDowell JC; et al. An intermediate grade of finished genomic sequence suitable for comparative analyses	6	10
142	2	77	40 2004 GENOME RESEARCH 14 (12): 2412-2423 Blanchette M; Green ED; Miller W; Haussler D Reconstructing large regions of an ancestral mammalian genome in silico	2	11
143	1	39	41 2004 GENOME RESEARCH 14 (12): 2439-2447 Abe K; Noguchi H; Tagawa K; Yuzuriha M; Toyoda A; et al. Contribution of Asian mouse subspecies Mus musculus molossinus to genomic constitution of strain C57BL/6J, as defined by BAC-end sequence-SKIP analysis	2	5
144	1	50	163 2005 GENOME RESEARCH 15 (1): 54-66 Florea L; Di Francesco V; Miller J; Turner R; Yao A; et al. Gene and alternative splicing annotation with AIR	0	3
145	1	28	164 2005 GENOME RESEARCH 15 (1): 98-110 Bourque G; Zdobnov EM; Bork P; Pevzner PA; Tesler G Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages	1	23
146	1	38	165 2005 GENOME RESEARCH 15 (1): 111-119 Abril JF; Castelo R; Guigo R Comparison of splice sites in mammals and chicken	0	1
147	2	34	166 2005 GENOME RESEARCH 15 (1): 137-145 Ovcharenko I; Loots GG; Nobrega MA; Hardison RC; Miller W; et al. Evolution and functional classification of vertebrate gene deserts	5	23
148	1	44	167 2005 GENOME RESEARCH 15 (1): 166-173 Kellner WA; Sullivan RT; Carlson BH; Thomas JW Uprobe: A genome-wide universal probe resource for comparative physical mapping in vertebrates	0	1
149	1	35	168 2005 GENOME RESEARCH 15 (2): 292-301 Milosavljevic A; Harris RA; Sodergren EJ; Jackson AR; Kalafus KJ; et al. Pooled genomic indexing of rhesus macaque	0	1
150	6	63	169 2005 GENOME RESEARCH 15 (7): 901-913 Cooper GM; Stone EA; Asimenos G; Green ED; Batzoglou S; et al. Distribution and intensity of constraint in mammalian genomic sequence	2	8
#	LCR	NCR	Node / Date / Journal / Author	LCS	GCS
151	11	92	170 2005 GENOME RESEARCH 15 (8): 1034-1050 Siepel A; Bejerano G; Pedersen JS; Hinrichs AS; Hou MM; et al. Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes	3	33
152	4	103	171 2005 GENOME RESEARCH 15 (8): 1051-1060 King DC; Taylor J; Elnitski L; Chiaromonte F; Miller W; et al. Evaluation of regulatory potential and conservation scores for detecting cis-regulatory modules in aligned mammalian genome sequences	0	6
153	2	49	172 2005 GENOME RESEARCH 15 (8): 1086-1094 Gaffney DJ; Keightley PD The scale of mutational variation in the murid genome	0	2
154	1	21	173 2005 GENOME RESEARCH 15 (8): 1127-1135 Vinson JP; Jaffe DB; O'Neill K; Karlsson EK; Stange-Thomann N; et al. Assembly of polymorphic genomes: Algorithms and application to Ciona savignyi	0	7
155	1	52	174 2005 GENOME RESEARCH 15 (8): 1136-1144 Harada JN; Bower KE; Orth AP; Callaway S; Nelson CG; et al. Identification of novel mammalian growth regulatory factors by genome-scale quantitative image analysis	1	3
156	1	49	175 2005 GENOME RESEARCH 15 (9): 1243-1249 van de Lagemaat LN; Gagnier L; Medstrand P; Mager DL Genomic deletions and precise removal of transposable elements mediated by short identical DNA segments in primates	0	3
157	1	40	176 2005 GENOME RESEARCH 15 (9): 1258-1264 Wang W; Zheng HK; Yang S; Yu HJ; Li J; et al. Origin and evolution of new exons in rodents	0	3
158	2	36	177 2005 GENOME RESEARCH 15 (9): 1307-1314 Woods IG; Wilson C; Friedlander B; Chang P; Reyes DK; et al. The zebrafish gene map defines ancestral vertebrate chromosomes	0	8
159	2	51	178 2005 GENOME RESEARCH 15 (11): 1519-1534 Smith AV; Thomas DJ; Munro HM; Abecasis GR Sequence features in regions of weak and strong linkage disequilibrium	0	1
160	6	135	179 2005 GENOME RESEARCH 15 (12): 1717-1728 Lazar J; Moreno C; Jacob HJ; Kwitek AE Impact of genomics on research in the rat	0	0
#	LCR	NCR	Node / Date / Journal / Author	LCS	GCS
161	4	70	180 2005 GENOME RESEARCH 15 (12): 1777-1786 Brent MR Genome annotation past, present, and future: How to define an ORF at each locus	1	1
162	2	60	181 2005 GENOME RESEARCH 15 (12): 1787-1797 Webber C; Ponting CP Hotspots of mutation and breakage in dog and human chromosomes	0	0
163	2	80	182 2005 GENOME RESEARCH 15 (12): 1809-1819 Pollinger JP; Bustamante CD; Fledel-Alon A; Schmutz S; Gray MM; et al. Selective sweep mapping of genes with large phenotypic effects	0	0
164	3	30	314 2006 GENOME RESEARCH 16 (2): 173-181 Wilson GM; Flibotte S; Missirlis PI; Marra MA; Jones S; et al. Identification by full-coverage array CGH of human DNA copy number increases relative to chimpanzee and gorilla	0	1
165	3	64	315 2006 GENOME RESEARCH 16 (7): 922-933 Sun M; Hurst LD; Carmichael GG; Chen J Evidence for variation in abundance of antisense transcripts between multicellular animals but no relationship between antisense transcription and organismic complexity	0	0
166	1	25	42 2004 GENOMICS 84 (5): 785-795 Zhang FK; Zhao ZM The influence of neighboring-nucleotide composition on single nucleotide polymorphisms (SNPs) in the mouse genome and its comparison with human SNPs	0	3
167	1	38	43 2004 GENOMICS 84 (5): 806-813 Smith NGC; Brandstrom M; Ellegren H Evidence for turnover of functional noncoding DNA in mammalian genome evolution	3	7
168	1	44	44 2004 GENOMICS 84 (5): 814-823 Mortlock DP; Portnoy ME; Chandler RL; Green ED Comparative sequence analysis of the Gdf6 locus reveals a duplicon-mediated chromosomal rearrangement in rodents and rapidly diverging coding and regulatory sequences	1	3
169	1	13	45 2004 GENOMICS 84 (5): 867-875 Yamashita T; Honda M; Takatori H; Nishino R; Hoshino N; et al. Genome-wide transcriptome mapping analysis identifies organ-specific gene expression patterns along human chromosomes	0	6
170	1	38	46 2004 GENOMICS 84 (6): 1051-1059 Pall GS; Wallis J; Axton R; Brownstein DG; Gautier P; et al. A novel transmembrane MSP-containing protein that plays a role in right ventricle development	0	2
#	LCR	NCR	Node / Date / Journal / Author	LCS	GCS
171	1	50	183 2005 GENOMICS 85 (2): 208-220 Cho S; Beintema JJ; Zhang JZ The ribonuclease A superfamily of mammals and birds: identifying new members and tracing evolutionary histories	1	6
172	1	28	184 2005 GENOMICS 85 (3): 322-329 Koelsch BU; Rajewsky MF; Kindler-Rohrborn A A 6-Mb contig-based comparative gene and linkage map of the rat schwannoma tumor suppressor region at 10q32.3	0	0
173	1	33	185 2005 GENOMICS 86 (3): 271-279 Tsuji AB; Sugyo A; Ogiu T; Sagara M; Kimura T; et al. Fine mapping of radiation susceptibility and gene expression analysis of LEC congenic rat lines	1	3
174	4	44	186 2005 GENOMICS 86 (3): 295-305 Portnoy ME; McDermott KJ; Antonellis A; Margulies EH; Prasad AB; et al. Detection of potential GDF6 regulatory elements by multispecies sequence comparisons and identification of a skeletal joint enhancer	0	0
175	4	59	187 2005 GENOMICS 86 (3): 306-315 Yang H; Shi P; Zhang YP; Zhang JZ Composition and evolution of the V2r vorneronasal receptor gene repertoire in mice and rats	0	10
176	2	59	188 2005 GENOMICS 86 (6): 638-647 Puente XS; Gutierrez-Fernandez A; Ordonez GR; Hillier LDW; Lopez-Otin C Comparative genomic analysis of human and chimpanzee proteases	0	1
177	2	21	189 2005 GENOMICS 86 (6): 759-766 Raymond CK; Subramanian S; Paddock M; Qiu RL; Deodato C; et al. Targeted, haplotype-resolved resequencing of long segments of the human genome	0	1
178	1	41	316 2006 GENOMICS 87 (2): 208-217 Woon PY; Curtis AM; Kaisaki PJ; Argoud KN; Wallace KJ; et al. Genomic organization of the rat Clock gene and sequence analysis in inbred rat strains	0	0
179	2	28	317 2006 GENOMICS 87 (2): 236-242 Tsuji AB; Sugyo A; Sudo H; Sagara M; Ishikawa A; et al. Defective repair of radiation-induced DNA damage is complemented by a CHORI-230-65K18 BAC clone on rat chromosome 4	0	0
180	1	18	318 2006 GENOMICS 87 (6): 772-776 Leeb T; Vogl C; Zhu BL; de Jong PJ; Binns MM; et al. A human-horse comparative map based on equine BAC end sequences	0	0
#	LCR	NCR	Node / Date / Journal / Author	LCS	GCS
181	3	38	319 2006 GENOMICS 88 (1): 34-43 Wang XX; Zhang JZ Remarkable expansions of an X-linked reproductive homeobox gene cluster in rodent evolution	0	0
182	1	23	190 2005 GLYCOBIOLOGY 15 (6): 615-624 Hamilton SR; Li HJ; Wischnewski H; Prasad A; Kerley-Hamilton JS; et al. Intact alpha-1,2-endomannosidase is a typical type II membrane protein	0	0
183	2	41	191 2005 HUMAN MOLECULAR GENETICS 14 (15): 2221-2229 Kryukov GV; Schmidt S; Sunyaev S Small fitness effect of mutations in highly conserved non-coding regions	0	4
184	6	89	320 2006 HUMAN MOLECULAR GENETICS 15: R31-R43 Temple G; Lamesch P; Milstein S; Hill DE; Wagner L; et al. From genome to proteome: developing expression clone resources for the human genome	0	0
185	6	37	321 2006 HUMAN MOLECULAR GENETICS 15: R51-R56 Dewey CN; Pachter L Evolution at the nucleotide level: the problem of multiple whole-genome alignment	0	0
186	1	33	47 2004 HYPERTENSION 44 (5): 695-701 Bilusic M; Bataillard A; Tschannen MR; Gao L; Barreto NE; et al. Mapping the genetic determinants of hypertension, metabolic diseases, and related phenotypes in the lyon hypertensive rat	2	4
187	1	33	192 2005 HYPERTENSION 45 (3): 451-459 Garrett MR; Meng HJ; Rapp JP; Joe B Locating a blood pressure quantitative trait locus within 117 kb on the rat genome - Substitution mapping and renal expression analysis	3	8
188	1	28	193 2005 HYPERTENSION 45 (4): 557-564 Dutil J; Eliopoulos V; Tremblay J; Hamet P; Charron S; et al. Multiple quantitative trait loci for blood pressure interacting epistatically and additively on Dahl rat chromosome 2	2	4
189	1	35	194 2005 HYPERTENSION 45 (4): 786-792 McBride MW; Brosnan MJ; Mathers J; McLellan LI; Miller WH; et al. Reduction of Gstm1 expression in the stroke-prone spontaneously hypertension rat contributes to increased oxidative stress	1	5
190	1	29	195 2005 HYPERTENSION 45 (5): 947-953 Iwai N; Yasui N; Naraba H; Tago N; Yamawaki H; et al. Klk1 as one of the genes contributing to hypertension in Dahl salt-sensitive rat	0	1
#	LCR	NCR	Node / Date / Journal / Author	LCS	GCS
191	4	38	196 2005 HYPERTENSION 46 (6): 1300-1308 Charron S; Duong C; Menard A; Roy J; Eliopoulos V; et al. Epistasis, not numbers, regulates functions of clustered Dahl rat quantitative trait loci applicable to human hypertension	0	0
192	2	27	322 2006 HYPERTENSION 47 (1): 1-5 Hubner N; Yagil C; Yagil Y Novel integrative approaches to the identification of candidate genes in hypertension	0	0
193	1	18	48 2004 IMMUNOBIOLOGY 209 (7): 559-568 Bhole D; Stahl GL Molecular basis for complement component 6 (C6) deficiency in rats and mice	0	0
194	1	59	49 2004 IMMUNOGENETICS 56 (5): 343-354 Hao L; Nei M Genomic organization and evolutionary analysis of Ly49 genes encoding the rodent natural killer cell receptors: rapid evolution by repeated gene duplication	3	12
195	1	65	50 2004 IMMUNOGENETICS 56 (8): 585-596 Ettinger RA; Moustakas AK; Lobaton SD Open reading frame sequencing and structure-based alignment of polypeptides encoded by RT1-Bb, RT1-Ba, RT1-Db, and RT1-Da alleles	0	0
196	1	9	51 2004 IMMUNOGENETICS 56 (9): 679-681 Hamann J The EGF-TM7 family of the rat	0	0
197	1	36	197 2005 IMMUNOGENETICS 57 (10): 739-749 Rothenburg S; Haag F; Koch-Nolte F; Carter C; Graham M; et al. Characterization of multiple alleles of the T-cell differentiation marker ART2 (RT6) in inbred and wild rats	0	0
198	1	66	52 2004 IMMUNOLOGY OF DIABETES III 1037: 41-58 Kutlu B; Naamane N; Berthou L; Eizirik DL New approaches for in silico identification of cytokine-modified beta cell gene networks	0	0
199	1	44	198 2005 INTEGRATIVE AND COMPARATIVE BIOLOGY 45 (3): 405-415 Koch LG; Britton SL Divergent selection for aerobic capacity in rats as a model for complex disease	0	3
200	1	51	199 2005 INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE 16 (6): 1057-1064 Forte A; Galderisi U; De Feo M; Quarto C; Renzulli A; et al. Carotid arteriotomy induces different temporal gene expression profiles in normotensive and hypertensive rat strains	0	0

Page 2 of 4: [  1  2  3  4 ]
Generated by HistCite 2006.05.24