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Fri Dec 10 16:03:56 2004
DNA determination mediates innate immunity to retroviral infection
Harris RS, Bishop KN, Sheehy AM, Craig HM, Petersen-Mahrt SK, Watt IN, Neuberger MS, Malim MH
CELL 113 (6): 803-809 JUN 13 2003
and the citing papers

Nodes: 87, Authors: 292, Journals: 42, Outer References: 2132, Words: 349
Collection span: 2003 - 2004
View: Overview. Sorted by LCR.
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
12610673 2004 NATURE REVIEWS IMMUNOLOGY 4(11):868-877
Harris RS; Liddament MT
Retroviral restriction by APOBEC proteins
00
22010172 2004 NATURE IMMUNOLOGY 5(11):1109-1115
Bieniasz PD
Intrinsic immunity: a front-line defense against viral attack
00
3163425 2004 CURRENT BIOLOGY 14(15):1385-1391
Liddament MT; Brown WL; Schumacher AJ; Harris RS
APOBEC3F properties and hypermutation preferences indicate activity against HIV-1 in vivo
34
4163344 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(33):34083-34086
Alce TM; Popik W
APOBEC3G is incorporated into virus-like particles by a direct interaction with HIV-1 Gag nucleocapsid protein
22
5154967 2004 JOURNAL OF VIROLOGY 78(21):12041-12046
Gaddis NC; Sheehy AM; Ahmad KM; Swanson CM; Bishop KN; et al.
Further investigation of simian immunodeficiency virus vif function in human cells
00
6135975 2004 NUCLEIC ACIDS RESEARCH 32(8):2421-2429
Suspene R; Sommer P; Henry M; Ferris S; Guetard D; et al.
APOBEC3G is a single-stranded DNA cytidine deaminase and functions independently of HIV reverse transcriptase
00
7137085 2004 TRENDS IN MOLECULAR MEDICINE 10(6):291-297
Rose KM; Marin M; Kozak SL; Kabat D
The viral infectivity factor (Vif) of HIV-1 unveiled
11
8123026 2004 CURRENT BIOLOGY 14(15):1392-1396
Bishop KN; Holmes RK; Sheehy AM; Davidson NO; Cho SJ; et al.
Cytidine deamination of retroviral DNA by diverse APOBEC proteins
45
9129666 2004 JOURNAL OF VIROLOGY 78(21):11841-11852
Luo K; Liu BD; Xiao ZX; Yu YK; Yu XH; et al.
Amino-terminal region of the human immunodeficiency virus type 1 nucleocapsid is required for human APOBEC3G packaging
00
10113235 2004 EMBO JOURNAL 23(12):2451-2458
Wiegand HL; Doehle BP; Bogerd HP; Cullen BR
A second human antiretroviral factor, APOBEC3F, is suppressed by the HIV-1 and HIV-2 Vif proteins
67
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
11112336 2004 EMBO REPORTS 5(7):679-680
Trono D
Retroviruses under editing crossfire - A second member of the human APOBEC3 family is a Vif-blockable innate antiretroviral factor
00
12115038 2004 HUMAN MOLECULAR GENETICS 13(16):1785-1791
Zhang JZ; Webb DM
Rapid evolution of primate antiviral enzyme APOBEC3G
12
13115076 2004 PLOS BIOLOGY 2(9):1278-1285
Sawyer SL; Emerman M; Malik HS
Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G
00
14103345 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(34):35822-35828
Svarovskaia ES; Xu HZ; Mbisa JL; Barr R; Gorelick RJ; et al.
Human apolipoprotein B mRNA-editing enzyme-catalytic polypeptide-like 3G (APOBEC3G) is incorporated into HIV-1 Virions through interactions with viral and nonviral RNAs
33
15103359 2004 JOURNAL OF VIROLOGY 78(15):8238-8244
Kobayashi M; Takaori-Kondo A; Shindo K; Abudu A; Fukunaga K; et al.
APOBEC3G targets specific virus species
11
16102087 2004 VIROLOGY 328(2):163-168
Schafer A; Bogerd HP; Cullen BR
Specific packaging of APOBEC3G into HIV-1 virions is mediated by the nucleocapsid domain of the gag polyprotein precursor
00
1795343 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(32):33177-33184
Cen S; Guo F; Niu MJ; Saadatmand J; Deflassieux J; et al.
The interaction between HIV-1 Gag and APOBEC3G
44
1893757 2004 JOURNAL OF VIROLOGY 78(11):6073-6076
Zheng YH; Irwin D; Kurosu T; Tokunaga K; Sata T; et al.
Human APOBEC3F is another host factor that blocks human immunodeficiency virus type 1 replication
810
1992468 2004 JOURNAL OF VIROLOGY 78(21):12058-12061
Zennou W; Perez-Caballero D; Gottlinger H; Bieniasz PD
APOBEC3G incorporation into human immunodeficiency virus type 1 particles
00
2084641 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(13):12355-12362
Akari H; Fujita M; Kao S; Khan MA; Shehu-Xhilaga M; et al.
High level expression of human immunodeficiency virus type-1 Vif inhibits viral infectivity by modulating proteolytic processing of the gag precursor at the p2/nucleocapsid processing site
22
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
2183471 2004 MICROBES AND INFECTION 6(9):791-798
Fujita M; Akari H; Sakurai A; Yoshida A; Chiba T; et al.
Expression of HIV-1 accessory protein Vif is controlled uniquely to be low and optimal by proteasome degradation
00
2282878 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(11):3770-3774
Bogerd HP; Doehle BP; Wiegand HL; Cullen BR
A single amino acid difference in the host APOBEC3G protein controls the primate species specificity of HIV type 1 virion infectivity factor
1516
2383280 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(15):5652-5657
Xu HZ; Svarovskaia ES; Barr R; Zhang YJ; Khan MA; et al.
A single amino acid substitution in human APOBEC3G antiretroviral enzyme confers resistance to HIV-1 virion infectivity factor-induced depletion
88
2474528 2004 CURRENT OPINION IN IMMUNOLOGY 16(4):477-482
Navarro F; Landau NR
Recent insights into HIV-1 Vif
12
2562123 2004 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 321(3):566-573
Douaisi M; Dussart S; Courcoul M; Bessou G; Vigne R; et al.
HIV-1 and MLV Gag proteins are sufficient to recruit APOBEC3G into virus-like particles
00
2663830 2004 CURRENT OPINION IN MICROBIOLOGY 7(5):555-559
Trkola A
HIV-host interactions: vital to the virus and key to its inhibition (vol 7, pg 555, 2004)
11
2763940 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(9):7792-7798
Mehle A; Strack B; Ancuta P; Zhang CS; McPike M; et al.
Vif overcomes the innate antiviral activity of APOBEC3G by promoting its degradation in the ubiquitin-proteasome pathway
1313
2861742 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(15):14481-14483
Mangeat B; Turelli P; Liao SY; Trono D
A single amino acid determinant governs the species-specific sensitivity of APOBEC3G to vif action
1010
2962446 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(42):43371-43373
Turelli P; Vianin S; Trono D
The innate antiretroviral factor APOBEC3G does not affect human LINE-1 retrotransposition in a cell culture assay
00
3068049 2004 JOURNAL OF IMMUNOLOGY 172(11):6513-6518
Cascalho M
Advantages and disadvantages of cytidine deamination
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
3162477 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(11):3725-3726
Kaiser SM; Emerman M
Controlling lentiviruses: Single amino acid changes can determine specificity
00
3263079 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(11):3927-3932
Schrofelbauer R; Chen D; Landau NR
A single amino acid of APOBEC3G controls its species-specific interaction with virion infectivity factor (Vif)
00
3353729 2004 CURRENT OPINION IN MICROBIOLOGY 7(4):407-411
Trkola A
HIV-host interactions: vital to the virus and key to its inhibition
00
3456654 2004 JOURNAL OF VIROLOGY 78(4):2072-2081
Liu BD; Yu XH; Luo K; Yu YK; Yu XF
Influence of primate lentiviral vif and proteasome inhibitors on human immunodeficiency virus type 1 virion packaging of APOBEC3G
89
3551070 2004 M S-MEDECINE SCIENCES 20(2):139-141
Schwartz O
HIV-1, a very Vif virus
00
3653674 2004 NATURE STRUCTURAL & MOLECULAR BIOLOGY 11(5):435-442
Yu Q; Konig R; Pillai S; Chiles K; Kearney M; et al.
Single-strand specificity of APOBEC3G accounts for minus-strand deamination of the HIV genome
911
3742932 2004 DNA REPAIR 3(1):85-89
Bhagwat AS
DNA-cytosine deaminases: from antibody maturation to antiviral defense
11
3842947 2004 JOURNAL OF CELLULAR BIOCHEMISTRY 92(3):560-572
Li JL; Potash MJ; Volsky DJ
Functional domains of APOBEC3G required for antiviral activity
11
39417153 2004 JOURNAL OF MOLECULAR MEDICINE-JMM 82(5):280-297
Krokan HE; Kavli B; Slupphaug G
Novel aspects of macromolecular repair and relationship to human disease
02
4044562 2004 JOURNAL OF VIROLOGY 78(19):10574-10581
Feng F; Davis A; Lake JA; Carr J; Xia W; et al.
Ring finger protein ZIN interacts with human immunodeficiency virus type 1 Vif
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
4143364 2004 JOURNAL OF VIROLOGY 78(20):11070-11076
An P; Bleiber G; Duggal P; Nelson G; May M; et al.
APOBEC3G genetic variants and their influence on the progression to AIDS
00
4244565 2004 JOURNAL OF VIROLOGY 78(21):11816-11822
Ikeda Y; Ylinen LMJ; Kahar-Bador M; Towers GJ
Influence of gag on human immunodeficiency virus type 1 species-specific tropism
00
4344282 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(29):10780-10785
Keckesova Z; Ylinen LMJ; Towers GJ
The human and African green monkey TRIM5 alpha genes encode Ref1 and Lv1 retroviral restriction factor activities
25
4442483 2004 TRENDS IN MICROBIOLOGY 12(4):145-148
Argyris EG; Pomerantz RJ
HIV-1 Vif versus APOBEC3G: newly appreciated warriors in the ancient battle between virus and host
00
453213 2003 CURRENT BIOLOGY 13(22):2009-2013
Conticello SG; Harris RS; Neuberger MS
The Vif protein of HIV triggers degradation of the human antiretroviral DNA deaminase APOBEC3G
2326
4631620 2004 AIDS 18(13):1861-1863
Berkhout B; de Ronde A
APOBEC3G versus reverse transcriptase in the generation of HIV-1 drug-resistance mutations
00
4731421 2004 AIDS 18(13):1863-1865
Min W; Hui X; Hong KX; Huang HL; Tang HL; et al.
Biased G-to-A hypermutation in HIV-1 proviral DNA from a long-term non-progressor
00
4839648 2004 JOURNAL OF IMMUNOLOGY 172(10):5815-5821
Wang CL; Wabl M
DNA acrobats of the Ig class switch
02
4922018 2003 TRENDS IN MOLECULAR MEDICINE 9(10):409-413
Vartanian JP; Sommer P; Wain-Hobson S
Death and the retrovirus
89
5026622 2004 AIDS RESEARCH AND HUMAN RETROVIRUSES 20(3):285-295
Swiggard WJ; O'Doherty U; McGain D; Jeyakumar D; Malim MH
Long HIV type 1 reverse transcripts can accumulate stably within resting CD4(+) T cells while short ones are degraded
11
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
5123334 2004 DNA REPAIR 3(7):687-692
Steele EJ
DNA polymerase-eta as a reverse transcriplase: implications for mechanisms of hypermutation in innate anti-retroviral defences and antibody SHM systems
00
5225360 2004 JOURNAL OF VIROLOGY 78(16):8799-8811
Garcin D; Marq JB; Iseni F; Martin S; Kolakofsky D
A short peptide at the amino terminus of the Sendai virus C protein acts as an independent element that induces STAT1 instability
00
5324263 2004 JOURNAL OF VIROLOGY 78(19):10747-10754
Ciuffi A; Bleiber G; Munoz M; Martinez R; Loeuillet C; et al.
Entry and transcription as key determinants of differences in CD4 T-cell permissiveness to human immunodeficiency virus type 1 infection
00
5427084 2004 TRENDS IN MICROBIOLOGY 12(4):170-177
Freed EO
HIV-1 and the host cell: an intimate association
00
551202 2003 CELL 114(3):281-283
Goff SP
Death by deamination: A novel host restriction system for HIV-1
69
561264 2003 JOURNAL OF BIOLOGICAL CHEMISTRY 278(45):44412-44416
Shindo K; Takaori-Kondo A; Kobayashi M; Abudu A; Fukunaga K; et al.
The enzymatic activity of CEM15/Apobec-3G is essential for the regulation of the infectivity of HIV-1 virion but not a sole determinant of its antiviral activity
79
571475 2003 JOURNAL OF VIROLOGY 77(21):11398-11407
Kao S; Khan MA; Miyagi E; Plishka R; Buckler-White A; et al.
The human immunodeficiency virus type 1 Vif protein reduces intracellular expression and inhibits packaging of APOBEC3G (CEM15), a cellular inhibitor of virus infectivity
1924
581456 2003 MOLECULAR CELL 12(2):501-508
Barreto V; Reina-San-Martin B; Ramiro AR; McBride KM; Nussenzweig MC
C-terminal deletion of AID uncouples class switch recombination from somatic hypermutation and gene conversion
220
591307 2003 MOLECULAR CELL 12(3):591-601
Stopak K; de Noronha C; Yonemoto W; Greene WC
HIV-1 Vif blocks the antiviral activity of APOBEC3G by impairing both its translation and intracellular stability
3950
601158 2003 MOLECULAR THERAPY 8(4):525-527
Cullen BR
HIV-1 Vif: Counteracting innate antiretroviral defenses
12
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
611189 2003 NATURE 424(6944):21-22
Gu YP; Sundquist WI
Good to CU
66
6212910 2003 NATURE IMMUNOLOGY 4(7):641-643
Harris RS; Sheehy AM; Craig HM; Malim MH; Neuberger MS
DNA deamination: not just a trigger for antibody diversification but also a mechanism for defense against retroviruses
79
6314011 2003 NATURE MEDICINE 9(11):1398-1403
Marin M; Rose KM; Kozak SL; Kabat D
HIV-1 Vif protein binds the editing enzyme APOBEC3G and induces its degradation
4155
6412512 2003 NATURE MEDICINE 9(11):1404-1407
Sheehy AM; Gaddis NC; Malim MH
The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif
4052
651413 2003 NATURE REVIEWS IMMUNOLOGY 3(7):517-517
O'Connell D
HIV - One step forward ... one step back
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66111814 2003 NATURE REVIEWS MICROBIOLOGY 1(3):181-190
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HIV-1 dynamics in vivo: Implications for therapy
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6712915 2003 SCIENCE 301(5635):923-925
KewalRamani VN; Coffin JM
Weapons of mutational destruction
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6812716 2003 SCIENCE 302(5647):1056-1060
Yu XH; Yu YK; Liu BD; Luo K; Kong W; et al.
Induction of APOBEC3G ubiquitination and degradation by an HIV-1 Vif-Cul5-SCF complex
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Genomics and immunology
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70110619 2003 VIRAL IMMUNOLOGY 16(4):461-474
Navas-Martin S; Weiss SR
SARS: Lessons learned from other coronaviruses
01
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
711124 2004 CELL 116(4)
Harris RS; Bishop KN; Sheehy AM; Craig HM; Petersen-Mahrt SK; et al.
DNA deamination mediates innate immunity to retroviral infection (vol 113, pg 803, 2003)
00
7213627 2004 CURRENT OPINION IN GENETICS & DEVELOPMENT 14(1):5-10
Friedberg EC; McDaniel LD; Schultz RA
The role of endogenous and exogenous DNA damage and mutagenesis
03
73123731 2004 CURRENT PHARMACEUTICAL DESIGN 10(30):3725-3739
Muriaux D; Darlix JL; Cimarelli A
Targeting the assembly of the human immunodeficiency virus type I
01
7413333 2004 DNA REPAIR 3(5):505-513
Fischer JA; Muller-Weeks S; Caradonna S
Proteolytic degradation of the nuclear isoform of uracil-DNA glycosylase occurs during the S phase of the cell cycle
00
7512637 2004 EUROPEAN JOURNAL OF IMMUNOLOGY 34(3):844-849
Fugmann SD; Rush JS; Schatz DG
Non-redundancy of cytidine deaminases in class switch recombination
02
76112439 2004 INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY 36(9):1716-1734
Rezende LF; Prasad VR
Nucleo side-analog resistance mutations in HIV-1 reverse transcriptase and their influence on polymerase fidelity and viral mutation rates
00
7713950 2004 JOURNAL OF INFECTIOUS DISEASES 189(4):567-571
Pomerantz RJ
HIV-1 infection and genomics: Sorting out the complexity
00
7817951 2004 JOURNAL OF MEDICAL VIROLOGY 73(3):350-361
Pariente N; Pernas M; de la Rosa R; Gomez-Mariano G; Fernandez G; et al.
Long-term suppression of plasma viremia with highly active antiretroviral therapy despite virus evolution and very limited selection of drug-resistant genotypes
01
7915752 2004 JOURNAL OF MOLECULAR BIOLOGY 337(3):585-596
Beale RCL; Petersen-Mahrt SK; Watt IN; Harris RS; Rada C; et al.
Comparison of the differential context-dependence of DNA deamination by APOBEC enzymes: Correlation with mutation spectra in vivo
812
8014755 2004 JOURNAL OF VIROLOGY 78(5):2426-2433
Gao F; Chen Y; Levy DN; Conway JA; Kepler TB; et al.
Unselected mutations in the human immunodeficiency virus type 1 genome are mostly nonsynonymous and often deleterious
23
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
8115756 2004 JOURNAL OF VIROLOGY 78(8):4234-4247
Charpentier C; Dwyer DE; Mammano F; Lecossier D; Clavel F; et al.
Role of minority populations of human immunodeficiency virus type 1 in the evolution of viral resistance to protease inhibitors
00
8215458 2004 JOURNAL OF VIROLOGY 78(14):7565-7574
Pastore C; Ramos A; Mosier DE
Intrinsic obstacles to human immunodeficiency virus type 1 coreceptor switching
00
8317961 2004 JOURNAL OF VIROLOGY 78(17):9524-9537
Llano M; Vanegas M; Fregoso O; Saenz D; Chung S; et al.
LEDGF/p75 determines cellular trafficking of diverse lentiviral but not murine oncoretroviral integrase proteins and is a component of functional lentiviral preintegration complexes
00
8418169 2004 JOURNAL OF VIROLOGY 78(22):12537-12547
Baumann JG; Unutmaz D; Miller MD; Breun SKJ; Grill SM; et al.
Murine T cells potently restrict human immunodeficiency virus infection
00
8513781 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(29):10774-10779
Hatziioannou T; Perez-Caballero D; Yang A; Cowan S; Bieniasz PD
Retrovirus resistance factors Ref1 and Lv1 are species-specific variants of TRIM5 alpha
14
8615786 2004 VIROLOGY 318(1):350-359
Kristbjornsdottir HB; Andresdottir V; Svansson V; Torsteinsdottir S; Matthiasdottir S; et al.
The vif gene of maedi-visna virus is essential for infectivity in vivo and in vitro
00
870231 2003 CELL 113(6):803-809
Harris RS; Bishop KN; Sheehy AM; Craig HM; Petersen-Mahrt SK; et al.
DNA determination mediates innate immunity to retroviral infection
8686

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