HistCite - Initial sequencing and analysis of the human genome (Lander)

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#	Date / Author / Journal	LCS	GCS	LCR	CR
1	69 Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, et al. Initial sequencing and analysis of the human genome NATURE. 2001 FEB 15; 409 (6822): 860-921	7359	7358	7	450
2	79 Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, et al. The sequence of the human genome SCIENCE. 2001 FEB 16; 291 (5507): 1304-+	3120	5111	2	192
3	1865 Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, et al. Initial sequencing and comparative analysis of the mouse genome NATURE. 2002 DEC 5; 420 (6915): 520-562	1083	2474	43	331
4	934 Gavin AC, Bosche M, Krause R, Grandi P, Marzioch M, et al. Functional organization of the yeast proteome by systematic analysis of protein complexes NATURE. 2002 JAN 10; 415 (6868): 141-147	96	1784	1	46
5	1868 Manning G, Whyte DB, Martinez R, Hunter T, Sudarsanam S The protein kinase complement of the human genome SCIENCE. 2002 DEC 6; 298 (5600): 1912-+	35	1587	5	36
6	2968 Gibbs RA, Belmont JW, Hardenbol P, Willis TD, Yu FL, et al. The International HapMap Project NATURE. 2003 DEC 18; 426 (6968): 789-796	110	1480	7	68
7	2523 Shi YG, Massague J Mechanisms of TGF-beta signaling from cell membrane to the nucleus CELL. 2003 JUN 13; 113 (6): 685-700	1	1410	2	140
8	923 Bateman A, Birney E, Cerruti L, Durbin R, Etwiller L, et al. The Pfam Protein Families Database NUCLEIC ACIDS RESEARCH. 2002 JAN 1; 30 (1): 276-280	64	1376	1	17
9	1150 Kent WJ BLAT - The BLAST-like alignment tool GENOME RESEARCH. 2002 APR; 12 (4): 656-664	206	1355	1	20
10	4176 Lewis BP, Burge CB, Bartel DP Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets CELL. 2005 JAN 14; 120 (1): 15-20	28	1239	6	24
#	Date / Author / Journal	LCS	GCS	LCR	CR
11	912 Bird A DNA methylation patterns and epigenetic memory GENES & DEVELOPMENT. 2002 JAN 1; 16 (1): 6-21	57	1224	4	202
12	2296 Gottesman II, Gould TD The endophenotype concept in psychiatry: Etymology and strategic intentions AMERICAN JOURNAL OF PSYCHIATRY. 2003 APR; 160 (4): 636-645	9	1029	4	141
13	2118 Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, et al. Systematic functional analysis of the Caenorhabditis elegans genome using RNAi NATURE. 2003 JAN 16; 421 (6920): 231-237	44	1011	4	40
14	956 Schaid DJ, Rowland CM, Tines DE, Jacobson RM, Poland GA Score tests for association between traits and haplotypes when linkage phase is ambiguous AMERICAN JOURNAL OF HUMAN GENETICS. 2002 FEB; 70 (2): 425-434	11	903	2	40
15	3826 Collins FS, Lander ES, Rogers J, Waterston RH, Int Human Genome Sequencing Conso Finishing the euchromatic sequence of the human genome NATURE. 2004 OCT 21; 431 (7011): 931-945	232	901	31	71
16	473 Daly MJ, Rioux JD, Schaffner SE, Hudson TJ, Lander ES High-resolution haplotype structure in the human genome NATURE GENETICS. 2001 OCT; 29 (2): 229-232	70	895	3	25
17	1465 Kong A, Gudbjartsson DF, Sainz J, Jonsdottir GM, Gudjonsson SA, et al. A high-resolution recombination map of the human genome NATURE GENETICS. 2002 JUL; 31 (3): 241-247	105	824	6	26
18	2437 Kellis M, Patterson N, Endrizzi M, Birren B, Lander ES Sequencing and comparison of yeast species to identify genes and regulatory elements NATURE. 2003 MAY 15; 423 (6937): 241-254	57	824	5	50
19	3426 Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, et al. A gene atlas of the mouse and human protein-encoding transcriptomes PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 APR 20; 101 (16): 6062-6067	58	820	8	36
20	2755 Tatusov RL, Fedorova ND, Jackson JD, Jacobs AR, Kiryutin B, et al. The COG database: an updated version includes eukaryotes BMC BIOINFORMATICS. 2003 SEP 11; 4: Art. No. 41	22	814	6	60
#	Date / Author / Journal	LCS	GCS	LCR	CR
21	1880 Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, et al. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 DEC 24; 99 (26): 16899-16903	72	801	4	18
22	1167 Cartegni L, Chew SL, Krainer AR Listening to silence and understanding nonsense: Exonic mutations that affect splicing NATURE REVIEWS GENETICS. 2002 APR; 3 (4): 285-298	70	781	5	149
23	165 Reich DE, Cargill M, Bolk S, Ireland J, Sabeti PC, et al. Linkage disequilibrium in the human genome NATURE. 2001 MAY 10; 411 (6834): 199-204	69	775	1	35
24	3413 Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution NATURE. 2004 APR 1; 428 (6982): 493-521	269	752	58	226
25	115 Kuehl P, Zhang J, Lin Y, Lamba J, Assem M, et al. Sequence diversity in CYP3A promoters and characterization of the genetic basis of polymorphic CYP3A5 expression NATURE GENETICS. 2001 APR; 27 (4): 383-391	14	721	2	44
26	1584 Aparicio S, Chapman J, Stupka E, Putnam N, Chia J, et al. Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes SCIENCE. 2002 AUG 23; 297 (5585): 1301-1310	184	720	6	97
27	1872 Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, et al. The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins SCIENCE. 2002 DEC 13; 298 (5601): 2157-2167	86	709	4	90
28	1186 Su AI, Cooke MP, Ching KA, Hakak Y, Walker JR, et al. Large-scale analysis of the human and mouse transcriptomes PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 APR 2; 99 (7): 4465-4470	45	697	2	25
29	3953 Hillier LW, Miller W, Birney E, Warren W, Hardison RC, et al. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution NATURE. 2004 DEC 9; 432 (7018): 695-716	143	697	43	165
30	2105 Karolchik D, Baertsch R, Diekhans M, Furey TS, Hinrichs A, et al. The UCSC Genome Browser Database NUCLEIC ACIDS RESEARCH. 2003 JAN 1; 31 (1): 51-54	127	694	4	12
#	Date / Author / Journal	LCS	GCS	LCR	CR
31	2578 Goll DE, Thompson VF, Li HQ, Wei W, Cong JY The calpain system PHYSIOLOGICAL REVIEWS. 2003 JUL; 83 (3): 731-801	0	681	2	504
32	5921 Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, et al. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project NATURE. 2007 JUN 14; 447 (7146): 799-816	72	671	31	128
33	4304 Xie XH, Lu J, Kulbokas EJ, Golub TR, Mootha V, et al. Systematic discovery of regulatory motifs in human promoters and 3 ' UTRs by comparison of several mammals NATURE. 2005 MAR 17; 434 (7031): 338-345	26	648	10	37
34	3132 Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, et al. Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium AMERICAN JOURNAL OF HUMAN GENETICS. 2004 JAN; 74 (1): 106-120	17	643	3	41
35	1626 Hopkins AL, Groom CR The druggable genome NATURE REVIEWS DRUG DISCOVERY. 2002 SEP; 1 (9): 727-730	49	628	4	15
36	1048 Wood V, Gwilliam R, Rajandream MA, Lyne M, Lyne R, et al. The genome sequence of Schizosaccharomyces pombe NATURE. 2002 FEB 21; 415 (6874): 871-880	87	620	2	78
37	1866 Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, et al. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs NATURE. 2002 DEC 5; 420 (6915): 563-573	128	619	13	52
38	896 Modrek B, Lee C A genomic view of alternative splicing NATURE GENETICS. 2002 JAN; 30 (1): 13-19	146	609	3	39
39	5133 Bernstein BE, Mikkelsen TS, Xie XH, Kamal M, Huebert DJ, et al. A bivalent chromatin structure marks key developmental genes in embryonic stem cells CELL. 2006 APR 21; 125 (2): 315-326	11	609	8	59
40	2970 Johnson JM, Castle J, Garrett-Engele P, Kan ZY, Loerch PM, et al. Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays SCIENCE. 2003 DEC 19; 302 (5653): 2141-2144	114	607	9	20
#	Date / Author / Journal	LCS	GCS	LCR	CR
41	4604 Mikkelsen TS, Hillier LW, Eichler EE, Zody MC, Jaffe DB, et al. Initial sequence of the chimpanzee genome and comparison with the human genome NATURE. 2005 SEP 1; 437 (7055): 69-87	158	580	38	172
42	2366 Collins FS, Green ED, Guttmacher AE, Guyer MS A vision for the future of genomics research NATURE. 2003 APR 24; 422 (6934): 835-847	97	574	5	44
43	3289 Cawley S, Bekiranov S, Ng HH, Kapranov P, Sekinger EA, et al. Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs CELL. 2004 FEB 20; 116 (4): 499-509	55	545	9	49
44	1290 Panda S, Antoch MP, Miller BH, Su AI, Schook AB, et al. Coordinated transcription of key pathways in the mouse by the circadian clock CELL. 2002 MAY 3; 109 (3): 307-320	4	535	4	73
45	509 Levy GG, Nichols WC, Lian EC, Foroud T, McClintick JN, et al. Mutations in a member of the ADAMTS gene family cause thrombotic thrombocytopenic purpura NATURE. 2001 OCT 4; 413 (6855): 488-494	2	525	1	40
46	3827 Jaillon O, Aury JM, Brunet F, Petit JL, Stange-Thomann N, et al. Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype NATURE. 2004 OCT 21; 431 (7011): 946-957	53	521	15	57
47	1583 Schroder ARW, Shinn P, Chen HM, Berry C, Ecker JR, et al. HIV-1 integration in the human genome favors active genes and local hotspots CELL. 2002 AUG 23; 110 (4): 521-529	49	514	2	54
48	2533 Skaletsky H, Kuroda-Kawaguchi T, Minx PJ, Cordum HS, Hillier L, et al. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes NATURE. 2003 JUN 19; 423 (6942): 825-U2	42	506	8	50
49	472 Rioux JD, Daly MJ, Silverberg MS, Lindblad K, Steinhart H, et al. Genetic variation in the 5q31 cytokine gene cluster confers susceptibility to Crohn disease NATURE GENETICS. 2001 OCT; 29 (2): 223-228	36	505	2	15
50	1570 Bailey JA, Gu ZP, Clark RA, Reinert K, Samonte RV, et al. Recent segmental duplications in the human genome SCIENCE. 2002 AUG 9; 297 (5583): 1003-1007	142	488	9	25
#	Date / Author / Journal	LCS	GCS	LCR	CR
51	1700 Pollack JR, Sorlie T, Perou CM, Rees CA, Jeffrey SS, et al. Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 OCT 1; 99 (20): 12963-12968	18	483	2	18
52	225 Dean M, Rzhetsky A, Allikmets R The human ATP-binding cassette (ABC) transporter superfamily GENOME RESEARCH. 2001 JUL; 11 (7): 1156-1166	7	481	2	70
53	1009 Sahai E, Marshall CJ RHO-GTPases and cancer NATURE REVIEWS CANCER. 2002 FEB; 2 (2): 133-+	2	473	1	140
54	916 Hubbard T, Barker D, Birney E, Cameron G, Chen Y, et al. The Ensembl genome database project NUCLEIC ACIDS RESEARCH. 2002 JAN 1; 30 (1): 38-41	95	471	1	15
55	4775 Lindblad-Toh K, Wade CM, Mikkelsen TS, Karlsson EK, Jaffe DB, et al. Genome sequence, comparative analysis and haplotype structure of the domestic dog NATURE. 2005 DEC 8; 438 (7069): 803-819	100	470	26	119
56	922 Letunic I, Goodstadt L, Dickens NJ, Doerks T, Schultz J, et al. Recent improvements to the SMART domain-based sequence annotation resource NUCLEIC ACIDS RESEARCH. 2002 JAN 1; 30 (1): 242-244	24	463	4	18
57	2203 Cardon LR, Palmer LJ Population stratification and spurious allelic association LANCET. 2003 FEB 15; 361 (9357): 598-604	14	461	4	92
58	2363 Pawson T, Nash P Assembly of cell regulatory systems through protein interaction domains SCIENCE. 2003 APR 18; 300 (5618): 445-452	16	453	4	148
59	271 Cravatt BF, Demarest K, Patricelli MP, Bracey MH, Giang DK, et al. Supersensitivity to anandamide and enhanced endogenous cannabinoid signaling in mice lacking fatty acid amide hydrolase PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2001 JUL 31; 98 (16): 9371-9376	2	451	2	41
60	3263 Maquat LE Nonsense-mediated mRNA decay: Splicing, translation and mRNP dynamics NATURE REVIEWS MOLECULAR CELL BIOLOGY. 2004 FEB; 5 (2): 89-99	20	451	6	162
#	Date / Author / Journal	LCS	GCS	LCR	CR
61	166 Hooper LV, Gordon JI Commensal host-bacterial relationships in the gut SCIENCE. 2001 MAY 11; 292 (5519): 1115-1118	5	436	2	51
62	2108 Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Barrell D, et al. The InterPro Database, 2003 brings increased coverage and new features NUCLEIC ACIDS RESEARCH. 2003 JAN 1; 31 (1): 315-318	27	432	4	21
63	2199 Faustino NA, Cooper TA Pre-mRNA splicing and human disease GENES & DEVELOPMENT. 2003 FEB 15; 17 (4): 419-437	43	432	9	183
64	2493 Fredriksson R, Lagerstrom MC, Lundin LG, Schioth HB The G-protein-coupled receptors in the human genome form five main families. Phylogenetic analysis, paralogon groups, and fingerprints MOLECULAR PHARMACOLOGY. 2003 JUN; 63 (6): 1256-1272	30	432	3	42
65	3633 Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, et al. Genome evolution in yeasts NATURE. 2004 JUL 1; 430 (6995): 35-44	18	428	8	34
66	13 Ideker T, Galitski T, Hood L A new approach to decoding life: Systems biology ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS. 2001; 2: 343-372	34	426	2	142
67	294 Black AR, Black JD, Azizkhan-Clifford J Sp1 and kruppel-like factor family of transcription factors in cell growth regulation and cancer JOURNAL OF CELLULAR PHYSIOLOGY. 2001 AUG; 188 (2): 143-160	6	418	2	267
68	685 Malumbres M, Barbacid M To cycle or not to cycle: A critical decision in cancer NATURE REVIEWS CANCER. 2001 DEC; 1 (3): 222-231	0	416	1	117
69	2450 Kryukov GV, Castellano S, Novoselov SV, Lobanov AV, Zehtab O, et al. Characterization of mammalian selenoproteomes SCIENCE. 2003 MAY 30; 300 (5624): 1439-1443	6	413	4	27
70	3350 Kazazian HH Mobile elements: Drivers of genome evolution SCIENCE. 2004 MAR 12; 303 (5664): 1626-1632	146	410	27	84
#	Date / Author / Journal	LCS	GCS	LCR	CR
71	2360 Lim LP, Lau NC, Weinstein EG, Abdelhakim A, Yekta S, et al. The microRNAs of Caenorhabditis elegans GENES & DEVELOPMENT. 2003 APR 15; 17 (8): 991-1008	10	403	2	72
72	2814 Stuart JM, Segal E, Koller D, Kim SK A gene-coexpression network for global discovery of conserved genetic modules SCIENCE. 2003 OCT 10; 302 (5643): 249-255	18	399	3	30
73	2595 Levine M, Tjian R Transcription regulation and animal diversity NATURE. 2003 JUL 10; 424 (6945): 147-151	37	397	4	74
74	70 McPherson JD, Marra M, Hillier L, Waterston RH, Chinwalla A, et al. A physical map of the human genome NATURE. 2001 FEB 15; 409 (6822): 934-941	119	394	3	46
75	1180 Enright AJ, Van Dongen S, Ouzounis CA An efficient algorithm for large-scale detection of protein families NUCLEIC ACIDS RESEARCH. 2002 APR 1; 30 (7): 1575-1584	14	393	2	52
76	94 Kruglyak L, Nickerson DA Variation is the spice of life NATURE GENETICS. 2001 MAR; 27 (3): 234-236	49	392	1	24
77	686 Eddy SR Non-coding RNA genes and the modern RNA world NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 919-929	46	382	4	129
78	3512 Bejerano G, Pheasant M, Makunin I, Stephen S, Kent WJ, et al. Ultraconserved elements in the human genome SCIENCE. 2004 MAY 28; 304 (5675): 1321-1325	71	374	13	37
79	4503 Cartharius K, Frech K, Grote K, Klocke B, Haltmeier M, et al. Matlnspector and beyond: promoter analysis based on transcription factor binding sites BIOINFORMATICS. 2005 JUL 1; 21 (13): 2933-2942	4	374	5	48
80	687 Syvanen AC Accessing genetic variation: Genotyping single nucleotide polymorphisms NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 930-942	29	372	6	138
#	Date / Author / Journal	LCS	GCS	LCR	CR
81	1710 Chumakov I, Blumenfeld M, Guerassimenko O, Cavarec L, Palicio M, et al. Genetic and physiological data implicating the new human gene G72 and the gene for D-amino acid oxidase in schizophrenia PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 OCT 15; 99 (21): 13675-13680	13	372	3	49
82	2681 Thomas JW, Touchman JW, Blakesley RW, Bouffard GG, Beckstrom-Sternberg SM, et al. Comparative analyses of multi-species sequences from targeted genomic regions NATURE. 2003 AUG 14; 424 (6950): 788-793	101	370	6	30
83	3828 Feingold EA, Good PJ, Guyer MS, Kamholz S, Liefer L, et al. The ENCODE (ENCyclopedia of DNA elements) Project SCIENCE. 2004 OCT 22; 306 (5296): 636-640	71	365	12	28
84	1265 Batzer MA, Deininger PL Alu repeats and human genomic diversity NATURE REVIEWS GENETICS. 2002 MAY; 3 (5): 370-379	175	361	7	124
85	373 Harris BZ, Lim WA Mechanism and role of PDZ domains in signaling complex assembly JOURNAL OF CELL SCIENCE. 2001 SEP; 114 (18): 3219-3231	11	353	2	104
86	2787 Peri S, Navarro JD, Amanchy R, Kristiansen TZ, Jonnalagadda CK, et al. Development of human protein reference database as an initial platform for approaching systems biology in humans GENOME RESEARCH. 2003 OCT; 13 (10): 2363-2371	12	352	7	39
87	2870 Stein LD, Bao ZR, Blasiar D, Blumenthal T, Brent MR, et al. The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics PLOS BIOLOGY. 2003 NOV; 1 (2): Art. No. e45	0	351	17	118
88	1493 Maniatis T, Tasic B Alternative pre-mRNA splicing and proteome expansion in metazoans NATURE. 2002 JUL 11; 418 (6894): 236-243	62	349	14	96
89	4402 Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, et al. Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution SCIENCE. 2005 MAY 20; 308 (5725): 1149-1154	58	346	15	35
90	2191 Weinshilboum R Genomic medicine - Inheritance and drug response. NEW ENGLAND JOURNAL OF MEDICINE. 2003 FEB 6; 348 (6): 529-537	23	345	2	70
#	Date / Author / Journal	LCS	GCS	LCR	CR
91	2727 Wray GA, Hahn MW, Abouheif E, Balhoff JP, Pizer M, et al. The evolution of transcriptional regulation in eukaryotes MOLECULAR BIOLOGY AND EVOLUTION. 2003 SEP; 20 (9): 1377-1419	20	341	7	432
92	4397 Eichinger L, Pachebat JA, Glockner G, Rajandream MA, Sucgang R, et al. The genome of the social amoeba Dictyostelium discoideum NATURE. 2005 MAY 5; 435 (7038): 43-57	19	339	7	98
93	1016 Stankiewicz P, Lupski JR Genome architecture, rearrangements and genomic disorders TRENDS IN GENETICS. 2002 FEB; 18 (2): 74-82	67	337	13	83
94	9 Mackay TFC The genetic architecture of quantitative traits ANNUAL REVIEW OF GENETICS. 2001; 35: 303-339	7	333	2	251
95	2103 Litchfield DW Protein kinase CK2: structure, regulation and role in cellular decisions of life and death BIOCHEMICAL JOURNAL. 2003 JAN 1; 369: 1-15	0	330	5	206
96	745 Casanova JL, Abel L Genetic dissection of immunity to mycobacteria: The human model ANNUAL REVIEW OF IMMUNOLOGY. 2002; 20: 581-620	1	324	2	209
97	4993 Feuk L, Carson AR, Scherer SW Structural variation in the human genome NATURE REVIEWS GENETICS. 2006 FEB; 7 (2): 85-97	34	323	14	113
98	963 Angata T, Varki A Chemical diversity in the sialic acids and related alpha-keto acids: An evolutionary perspective CHEMICAL REVIEWS. 2002 FEB; 102 (2): 439-469	3	321	5	426
99	2306 Fiegler H, Carr P, Douglas EJ, Burford DC, Hunt S, et al. DNA microarrays for comparative genomic hybridization based on DOP-PCR amplification of BAC and PAC clones GENES CHROMOSOMES & CANCER. 2003 APR; 36 (4): 361-374	18	321	2	18
100	2326 Yelin R, Dahary D, Sorek R, Levanon EY, Goldstein O, et al. Widespread occurrence of antisense transcription in the human genome NATURE BIOTECHNOLOGY. 2003 APR; 21 (4): 379-386	45	319	3	29

Date / Author / Journal

LCS

GCS

LCR

69 Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, et al.

Initial sequencing and analysis of the human genome

NATURE. 2001 FEB 15; 409 (6822): 860-921

7359

7358

450

79 Venter JC, Adams MD, Myers EW, Li PW, Mural RJ, et al.

The sequence of the human genome

SCIENCE. 2001 FEB 16; 291 (5507): 1304-+

3120

5111

192

1865 Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, et al.

Initial sequencing and comparative analysis of the mouse genome

NATURE. 2002 DEC 5; 420 (6915): 520-562

1083

2474

331

934 Gavin AC, Bosche M, Krause R, Grandi P, Marzioch M, et al.

Functional organization of the yeast proteome by systematic analysis of protein complexes

NATURE. 2002 JAN 10; 415 (6868): 141-147

1784

1868 Manning G, Whyte DB, Martinez R, Hunter T, Sudarsanam S

The protein kinase complement of the human genome

SCIENCE. 2002 DEC 6; 298 (5600): 1912-+

1587

2968 Gibbs RA, Belmont JW, Hardenbol P, Willis TD, Yu FL, et al.

The International HapMap Project

NATURE. 2003 DEC 18; 426 (6968): 789-796

110

1480

2523 Shi YG, Massague J

Mechanisms of TGF-beta signaling from cell membrane to the nucleus

CELL. 2003 JUN 13; 113 (6): 685-700

1410

140

923 Bateman A, Birney E, Cerruti L, Durbin R, Etwiller L, et al.

The Pfam Protein Families Database

NUCLEIC ACIDS RESEARCH. 2002 JAN 1; 30 (1): 276-280

1376

1150 Kent WJ

BLAT - The BLAST-like alignment tool

GENOME RESEARCH. 2002 APR; 12 (4): 656-664

206

1355

4176 Lewis BP, Burge CB, Bartel DP

Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets

CELL. 2005 JAN 14; 120 (1): 15-20

1239

Date / Author / Journal

DNA methylation patterns and epigenetic memory

GENES & DEVELOPMENT. 2002 JAN 1; 16 (1): 6-21

1224

202

2296 Gottesman II, Gould TD

The endophenotype concept in psychiatry: Etymology and strategic intentions

AMERICAN JOURNAL OF PSYCHIATRY. 2003 APR; 160 (4): 636-645

1029

141

2118 Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, et al.

Systematic functional analysis of the Caenorhabditis elegans genome using RNAi

NATURE. 2003 JAN 16; 421 (6920): 231-237

1011

956 Schaid DJ, Rowland CM, Tines DE, Jacobson RM, Poland GA

Score tests for association between traits and haplotypes when linkage phase is ambiguous

AMERICAN JOURNAL OF HUMAN GENETICS. 2002 FEB; 70 (2): 425-434

903

3826 Collins FS, Lander ES, Rogers J, Waterston RH, Int Human Genome Sequencing Conso

Finishing the euchromatic sequence of the human genome

NATURE. 2004 OCT 21; 431 (7011): 931-945

232

901

473 Daly MJ, Rioux JD, Schaffner SE, Hudson TJ, Lander ES

High-resolution haplotype structure in the human genome

NATURE GENETICS. 2001 OCT; 29 (2): 229-232

895

1465 Kong A, Gudbjartsson DF, Sainz J, Jonsdottir GM, Gudjonsson SA, et al.

A high-resolution recombination map of the human genome

NATURE GENETICS. 2002 JUL; 31 (3): 241-247

105

824

2437 Kellis M, Patterson N, Endrizzi M, Birren B, Lander ES

Sequencing and comparison of yeast species to identify genes and regulatory elements

NATURE. 2003 MAY 15; 423 (6937): 241-254

824

3426 Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, et al.

A gene atlas of the mouse and human protein-encoding transcriptomes

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 APR 20; 101 (16): 6062-6067

820

2755 Tatusov RL, Fedorova ND, Jackson JD, Jacobs AR, Kiryutin B, et al.

The COG database: an updated version includes eukaryotes

BMC BIOINFORMATICS. 2003 SEP 11; 4: Art. No. 41

814

Date / Author / Journal

LCS

GCS

LCR

1880 Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, et al.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 DEC 24; 99 (26): 16899-16903

801

1167 Cartegni L, Chew SL, Krainer AR

Listening to silence and understanding nonsense: Exonic mutations that affect splicing

NATURE REVIEWS GENETICS. 2002 APR; 3 (4): 285-298

781

149

165 Reich DE, Cargill M, Bolk S, Ireland J, Sabeti PC, et al.

Linkage disequilibrium in the human genome

NATURE. 2001 MAY 10; 411 (6834): 199-204

775

3413 Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, et al.

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

NATURE. 2004 APR 1; 428 (6982): 493-521

269

752

226

115 Kuehl P, Zhang J, Lin Y, Lamba J, Assem M, et al.

Sequence diversity in CYP3A promoters and characterization of the genetic basis of polymorphic CYP3A5 expression

NATURE GENETICS. 2001 APR; 27 (4): 383-391

721

1584 Aparicio S, Chapman J, Stupka E, Putnam N, Chia J, et al.

Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes

SCIENCE. 2002 AUG 23; 297 (5585): 1301-1310

184

720

1872 Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, et al.

The draft genome of Ciona intestinalis: Insights into chordate and vertebrate origins

SCIENCE. 2002 DEC 13; 298 (5601): 2157-2167

709

1186 Su AI, Cooke MP, Ching KA, Hakak Y, Walker JR, et al.

Large-scale analysis of the human and mouse transcriptomes

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 APR 2; 99 (7): 4465-4470

697

3953 Hillier LW, Miller W, Birney E, Warren W, Hardison RC, et al.

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

NATURE. 2004 DEC 9; 432 (7018): 695-716

143

697

165

2105 Karolchik D, Baertsch R, Diekhans M, Furey TS, Hinrichs A, et al.

The UCSC Genome Browser Database

NUCLEIC ACIDS RESEARCH. 2003 JAN 1; 31 (1): 51-54

127

694

Date / Author / Journal

LCS

GCS

LCR

2578 Goll DE, Thompson VF, Li HQ, Wei W, Cong JY

The calpain system

PHYSIOLOGICAL REVIEWS. 2003 JUL; 83 (3): 731-801

681

504

5921 Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, et al.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

NATURE. 2007 JUN 14; 447 (7146): 799-816

671

128

4304 Xie XH, Lu J, Kulbokas EJ, Golub TR, Mootha V, et al.

Systematic discovery of regulatory motifs in human promoters and 3 ' UTRs by comparison of several mammals

NATURE. 2005 MAR 17; 434 (7031): 338-345

648

3132 Carlson CS, Eberle MA, Rieder MJ, Yi Q, Kruglyak L, et al.

Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium

AMERICAN JOURNAL OF HUMAN GENETICS. 2004 JAN; 74 (1): 106-120

643

1626 Hopkins AL, Groom CR

The druggable genome

NATURE REVIEWS DRUG DISCOVERY. 2002 SEP; 1 (9): 727-730

628

1048 Wood V, Gwilliam R, Rajandream MA, Lyne M, Lyne R, et al.

The genome sequence of Schizosaccharomyces pombe

NATURE. 2002 FEB 21; 415 (6874): 871-880

620

1866 Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, et al.

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

NATURE. 2002 DEC 5; 420 (6915): 563-573

128

619

896 Modrek B, Lee C

A genomic view of alternative splicing

NATURE GENETICS. 2002 JAN; 30 (1): 13-19

146

609

5133 Bernstein BE, Mikkelsen TS, Xie XH, Kamal M, Huebert DJ, et al.

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

CELL. 2006 APR 21; 125 (2): 315-326

609

2970 Johnson JM, Castle J, Garrett-Engele P, Kan ZY, Loerch PM, et al.

Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

SCIENCE. 2003 DEC 19; 302 (5653): 2141-2144

114

607

Date / Author / Journal

LCS

GCS

LCR

4604 Mikkelsen TS, Hillier LW, Eichler EE, Zody MC, Jaffe DB, et al.

Initial sequence of the chimpanzee genome and comparison with the human genome

NATURE. 2005 SEP 1; 437 (7055): 69-87

158

580

172

2366 Collins FS, Green ED, Guttmacher AE, Guyer MS

A vision for the future of genomics research

NATURE. 2003 APR 24; 422 (6934): 835-847

574

3289 Cawley S, Bekiranov S, Ng HH, Kapranov P, Sekinger EA, et al.

Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

CELL. 2004 FEB 20; 116 (4): 499-509

545

1290 Panda S, Antoch MP, Miller BH, Su AI, Schook AB, et al.

Coordinated transcription of key pathways in the mouse by the circadian clock

CELL. 2002 MAY 3; 109 (3): 307-320

535

509 Levy GG, Nichols WC, Lian EC, Foroud T, McClintick JN, et al.

Mutations in a member of the ADAMTS gene family cause thrombotic thrombocytopenic purpura

NATURE. 2001 OCT 4; 413 (6855): 488-494

525

3827 Jaillon O, Aury JM, Brunet F, Petit JL, Stange-Thomann N, et al.

Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

NATURE. 2004 OCT 21; 431 (7011): 946-957

521

1583 Schroder ARW, Shinn P, Chen HM, Berry C, Ecker JR, et al.

HIV-1 integration in the human genome favors active genes and local hotspots

CELL. 2002 AUG 23; 110 (4): 521-529

514

2533 Skaletsky H, Kuroda-Kawaguchi T, Minx PJ, Cordum HS, Hillier L, et al.

The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes

NATURE. 2003 JUN 19; 423 (6942): 825-U2

506

472 Rioux JD, Daly MJ, Silverberg MS, Lindblad K, Steinhart H, et al.

Genetic variation in the 5q31 cytokine gene cluster confers susceptibility to Crohn disease

NATURE GENETICS. 2001 OCT; 29 (2): 223-228

505

1570 Bailey JA, Gu ZP, Clark RA, Reinert K, Samonte RV, et al.

Recent segmental duplications in the human genome

SCIENCE. 2002 AUG 9; 297 (5583): 1003-1007

142

488

Date / Author / Journal

LCS

GCS

LCR

1700 Pollack JR, Sorlie T, Perou CM, Rees CA, Jeffrey SS, et al.

Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 OCT 1; 99 (20): 12963-12968

483

225 Dean M, Rzhetsky A, Allikmets R

The human ATP-binding cassette (ABC) transporter superfamily

GENOME RESEARCH. 2001 JUL; 11 (7): 1156-1166

481

1009 Sahai E, Marshall CJ

RHO-GTPases and cancer

NATURE REVIEWS CANCER. 2002 FEB; 2 (2): 133-+

473

140

916 Hubbard T, Barker D, Birney E, Cameron G, Chen Y, et al.

The Ensembl genome database project

NUCLEIC ACIDS RESEARCH. 2002 JAN 1; 30 (1): 38-41

471

4775 Lindblad-Toh K, Wade CM, Mikkelsen TS, Karlsson EK, Jaffe DB, et al.

Genome sequence, comparative analysis and haplotype structure of the domestic dog

NATURE. 2005 DEC 8; 438 (7069): 803-819

100

470

119

922 Letunic I, Goodstadt L, Dickens NJ, Doerks T, Schultz J, et al.

Recent improvements to the SMART domain-based sequence annotation resource

NUCLEIC ACIDS RESEARCH. 2002 JAN 1; 30 (1): 242-244

463

2203 Cardon LR, Palmer LJ

Population stratification and spurious allelic association

LANCET. 2003 FEB 15; 361 (9357): 598-604

461

2363 Pawson T, Nash P

Assembly of cell regulatory systems through protein interaction domains

SCIENCE. 2003 APR 18; 300 (5618): 445-452

453

148

271 Cravatt BF, Demarest K, Patricelli MP, Bracey MH, Giang DK, et al.

Supersensitivity to anandamide and enhanced endogenous cannabinoid signaling in mice lacking fatty acid amide hydrolase

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2001 JUL 31; 98 (16): 9371-9376

451

3263 Maquat LE

Nonsense-mediated mRNA decay: Splicing, translation and mRNP dynamics

NATURE REVIEWS MOLECULAR CELL BIOLOGY. 2004 FEB; 5 (2): 89-99

451

162

Date / Author / Journal

LCS

GCS

LCR

166 Hooper LV, Gordon JI

Commensal host-bacterial relationships in the gut

SCIENCE. 2001 MAY 11; 292 (5519): 1115-1118

436

2108 Mulder NJ, Apweiler R, Attwood TK, Bairoch A, Barrell D, et al.

The InterPro Database, 2003 brings increased coverage and new features

NUCLEIC ACIDS RESEARCH. 2003 JAN 1; 31 (1): 315-318

432

2199 Faustino NA, Cooper TA

Pre-mRNA splicing and human disease

GENES & DEVELOPMENT. 2003 FEB 15; 17 (4): 419-437

432

183

2493 Fredriksson R, Lagerstrom MC, Lundin LG, Schioth HB

The G-protein-coupled receptors in the human genome form five main families. Phylogenetic analysis, paralogon groups, and fingerprints

MOLECULAR PHARMACOLOGY. 2003 JUN; 63 (6): 1256-1272

432

3633 Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, et al.

Genome evolution in yeasts

NATURE. 2004 JUL 1; 430 (6995): 35-44

428

13 Ideker T, Galitski T, Hood L

A new approach to decoding life: Systems biology

ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS. 2001; 2: 343-372

426

142

294 Black AR, Black JD, Azizkhan-Clifford J

Sp1 and kruppel-like factor family of transcription factors in cell growth regulation and cancer

JOURNAL OF CELLULAR PHYSIOLOGY. 2001 AUG; 188 (2): 143-160

418

267

685 Malumbres M, Barbacid M

To cycle or not to cycle: A critical decision in cancer

NATURE REVIEWS CANCER. 2001 DEC; 1 (3): 222-231

416

117

2450 Kryukov GV, Castellano S, Novoselov SV, Lobanov AV, Zehtab O, et al.

Characterization of mammalian selenoproteomes

SCIENCE. 2003 MAY 30; 300 (5624): 1439-1443

413

3350 Kazazian HH

Mobile elements: Drivers of genome evolution

SCIENCE. 2004 MAR 12; 303 (5664): 1626-1632

146

410

Date / Author / Journal

LCS

GCS

LCR

2360 Lim LP, Lau NC, Weinstein EG, Abdelhakim A, Yekta S, et al.

The microRNAs of Caenorhabditis elegans

GENES & DEVELOPMENT. 2003 APR 15; 17 (8): 991-1008

403

2814 Stuart JM, Segal E, Koller D, Kim SK

A gene-coexpression network for global discovery of conserved genetic modules

SCIENCE. 2003 OCT 10; 302 (5643): 249-255

399

2595 Levine M, Tjian R

Transcription regulation and animal diversity

NATURE. 2003 JUL 10; 424 (6945): 147-151

397

70 McPherson JD, Marra M, Hillier L, Waterston RH, Chinwalla A, et al.

A physical map of the human genome

NATURE. 2001 FEB 15; 409 (6822): 934-941

119

394

1180 Enright AJ, Van Dongen S, Ouzounis CA

An efficient algorithm for large-scale detection of protein families

NUCLEIC ACIDS RESEARCH. 2002 APR 1; 30 (7): 1575-1584

393

94 Kruglyak L, Nickerson DA

Variation is the spice of life

NATURE GENETICS. 2001 MAR; 27 (3): 234-236

392

686 Eddy SR

Non-coding RNA genes and the modern RNA world

NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 919-929

382

129

3512 Bejerano G, Pheasant M, Makunin I, Stephen S, Kent WJ, et al.

Ultraconserved elements in the human genome

SCIENCE. 2004 MAY 28; 304 (5675): 1321-1325

374

4503 Cartharius K, Frech K, Grote K, Klocke B, Haltmeier M, et al.

Matlnspector and beyond: promoter analysis based on transcription factor binding sites

BIOINFORMATICS. 2005 JUL 1; 21 (13): 2933-2942

374

687 Syvanen AC

Accessing genetic variation: Genotyping single nucleotide polymorphisms

NATURE REVIEWS GENETICS. 2001 DEC; 2 (12): 930-942

372

138

Date / Author / Journal

LCS

GCS

LCR

1710 Chumakov I, Blumenfeld M, Guerassimenko O, Cavarec L, Palicio M, et al.

Genetic and physiological data implicating the new human gene G72 and the gene for D-amino acid oxidase in schizophrenia

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 OCT 15; 99 (21): 13675-13680

372

2681 Thomas JW, Touchman JW, Blakesley RW, Bouffard GG, Beckstrom-Sternberg SM, et al.

Comparative analyses of multi-species sequences from targeted genomic regions

NATURE. 2003 AUG 14; 424 (6950): 788-793

101

370

3828 Feingold EA, Good PJ, Guyer MS, Kamholz S, Liefer L, et al.

The ENCODE (ENCyclopedia of DNA elements) Project

SCIENCE. 2004 OCT 22; 306 (5296): 636-640

365

1265 Batzer MA, Deininger PL

Alu repeats and human genomic diversity

NATURE REVIEWS GENETICS. 2002 MAY; 3 (5): 370-379

175

361

124

373 Harris BZ, Lim WA

Mechanism and role of PDZ domains in signaling complex assembly

JOURNAL OF CELL SCIENCE. 2001 SEP; 114 (18): 3219-3231

353

104

2787 Peri S, Navarro JD, Amanchy R, Kristiansen TZ, Jonnalagadda CK, et al.

Development of human protein reference database as an initial platform for approaching systems biology in humans

GENOME RESEARCH. 2003 OCT; 13 (10): 2363-2371

352

2870 Stein LD, Bao ZR, Blasiar D, Blumenthal T, Brent MR, et al.

The genome sequence of Caenorhabditis briggsae: A platform for comparative genomics

PLOS BIOLOGY. 2003 NOV; 1 (2): Art. No. e45

351

118

1493 Maniatis T, Tasic B

Alternative pre-mRNA splicing and proteome expansion in metazoans

NATURE. 2002 JUL 11; 418 (6894): 236-243

349

4402 Cheng J, Kapranov P, Drenkow J, Dike S, Brubaker S, et al.

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

SCIENCE. 2005 MAY 20; 308 (5725): 1149-1154

346

2191 Weinshilboum R

Genomic medicine - Inheritance and drug response.

NEW ENGLAND JOURNAL OF MEDICINE. 2003 FEB 6; 348 (6): 529-537

345

Date / Author / Journal

LCS

GCS

LCR

2727 Wray GA, Hahn MW, Abouheif E, Balhoff JP, Pizer M, et al.

The evolution of transcriptional regulation in eukaryotes

MOLECULAR BIOLOGY AND EVOLUTION. 2003 SEP; 20 (9): 1377-1419

341

432

4397 Eichinger L, Pachebat JA, Glockner G, Rajandream MA, Sucgang R, et al.

The genome of the social amoeba Dictyostelium discoideum

NATURE. 2005 MAY 5; 435 (7038): 43-57

339

1016 Stankiewicz P, Lupski JR

Genome architecture, rearrangements and genomic disorders

TRENDS IN GENETICS. 2002 FEB; 18 (2): 74-82

337

9 Mackay TFC

The genetic architecture of quantitative traits

ANNUAL REVIEW OF GENETICS. 2001; 35: 303-339

333

251

2103 Litchfield DW

Protein kinase CK2: structure, regulation and role in cellular decisions of life and death

BIOCHEMICAL JOURNAL. 2003 JAN 1; 369: 1-15

330

206

745 Casanova JL, Abel L

Genetic dissection of immunity to mycobacteria: The human model

ANNUAL REVIEW OF IMMUNOLOGY. 2002; 20: 581-620

324

209

4993 Feuk L, Carson AR, Scherer SW

Structural variation in the human genome

NATURE REVIEWS GENETICS. 2006 FEB; 7 (2): 85-97

323

113

963 Angata T, Varki A

Chemical diversity in the sialic acids and related alpha-keto acids: An evolutionary perspective

CHEMICAL REVIEWS. 2002 FEB; 102 (2): 439-469

321

426

2306 Fiegler H, Carr P, Douglas EJ, Burford DC, Hunt S, et al.

DNA microarrays for comparative genomic hybridization based on DOP-PCR amplification of BAC and PAC clones

GENES CHROMOSOMES & CANCER. 2003 APR; 36 (4): 361-374

321

100

2326 Yelin R, Dahary D, Sorek R, Levanon EY, Goldstein O, et al.

Widespread occurrence of antisense transcription in the human genome

NATURE BIOTECHNOLOGY. 2003 APR; 21 (4): 379-386

319

Initial sequencing and analysis of the human genome (Lander) The papers citing Lander ES, et al. "Initial sequencing and analysis of the human genome." NATURE. 2001 FEB 15; 409 (6822): 860-921	Historiographs	Glossary HistCite Guide About Grand Totals: LCS 38623, GCS 253809, CR 422506 Collection span: 2000 - 2010
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