HistCite - Initial sequencing and analysis of the human genome (Lander)

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#	Date / Author / Journal	LCS	GCS	LCR	CR
201	6289 Flicek P, Aken BL, Beal K, Ballester B, Caccamo M, et al. Ensembl 2008 NUCLEIC ACIDS RESEARCH. 2008 JAN; 36: D707-D714	15	192	5	30
202	2770 Mattick JS Challenging the dogma: the hidden layer of non-protein-coding RNAs in complex organisms BIOESSAYS. 2003 OCT; 25 (10): 930-939	30	191	17	104
203	348 Wiltshire S, Hattersley AT, Hitman GA, Walker M, Levy JC, et al. A genomewide scan for loci predisposing to type 2 diabetes in a UK population (the Diabetes UK Warren 2 repository): Analysis of 573 pedigrees provides independent replication of a susceptibility locus on chromosome 1q AMERICAN JOURNAL OF HUMAN GENETICS. 2001 SEP; 69 (3): 553-569	9	189	1	70
204	164 Schwartz RS Racial profiling in medical research. NEW ENGLAND JOURNAL OF MEDICINE. 2001 MAY 3; 344 (18): 1392-1393	6	188	2	13
205	499 Feller SM Crk family adaptors - signalling complex formation and biological roles ONCOGENE. 2001 OCT 1; 20 (44): 6348-6371	1	188	1	367
206	1442 Sorek R, Ast G, Graur D Alu-containing exons are alternatively spliced GENOME RESEARCH. 2002 JUL; 12 (7): 1060-1067	98	188	4	25
207	1316 Mural RJ, Adams MD, Myers EW, Smith HO, Miklos GLG, et al. A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome SCIENCE. 2002 MAY 31; 296 (5573): 1661-1671	58	184	5	56
208	5511 Eckhardt F, Lewin J, Cortese R, Rakyan VK, Attwood J, et al. DNA methylation profiling of human chromosomes 6, 20 and 22 NATURE GENETICS. 2006 DEC; 38 (12): 1378-1385	12	184	10	47
209	2120 Mootha VK, Lepage P, Miller K, Bunkenborg J, Reich M, et al. Identification of a gene causing human cytochrome c oxidase deficiency by integrative genomics PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 JAN 21; 100 (2): 605-610	7	183	3	23
210	2618 Suckau D, Resemann A, Schuerenberg M, Hufnagel P, Franzen J, et al. A novel MALDI LIFT-TOF/TOF mass spectrometer for proteomics ANALYTICAL AND BIOANALYTICAL CHEMISTRY. 2003 AUG; 376 (7): 952-965	2	183	4	61
#	Date / Author / Journal	LCS	GCS	LCR	CR
211	2253 Zhang DX, Hewitt GM Nuclear DNA analyses in genetic studies of populations: practice, problems and prospects MOLECULAR ECOLOGY. 2003 MAR; 12 (3): 563-584	1	182	6	208
212	2488 Miano JM Serum response factor: toggling between disparate programs of gene expression JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY. 2003 JUN; 35 (6): 577-593	0	182	3	185
213	1640 Xu Q, Modrek B, Lee C Genome-wide detection of tissue-specific alternative splicing in the human transcriptome NUCLEIC ACIDS RESEARCH. 2002 SEP 1; 30 (17): 3754-3766	48	180	5	79
214	3471 Garcia-Blanco MA, Baraniak AP, Lasda EL Alternative splicing in disease and therapy NATURE BIOTECHNOLOGY. 2004 MAY; 22 (5): 535-546	20	180	20	187
215	1576 Gregory SG, Sekhon M, Schein J, Zhao SY, Osoegawa K, et al. A physical map of the mouse genome NATURE. 2002 AUG 15; 418 (6899): 743-U3	45	179	10	50
216	2412 Reboul J, Vaglio P, Rual JF, Lamesch P, Martinez M, et al. C-elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression NATURE GENETICS. 2003 MAY; 34 (1): 35-41	16	179	7	30
217	5257 Sabeti PC, Schaffner SF, Fry B, Lohmueller J, Varilly P, et al. Positive natural selection in the human lineage SCIENCE. 2006 JUN 16; 312 (5780): 1614-1620	13	177	7	73
218	1768 Cowles CR, Hirschhorn JN, Altshuler D, Lander ES Detection of regulatory variation in mouse genes NATURE GENETICS. 2002 NOV; 32 (3): 432-437	6	176	1	23
219	4545 Morison IM, Ramsay JP, Spencer HG A census of mammalian imprinting TRENDS IN GENETICS. 2005 AUG; 21 (8): 457-465	2	176	7	63
220	615 Bang ML, Centner T, Fornoff F, Geach AJ, Gotthardt M, et al. The complete gene sequence of titin, expression of an unusual approximate to 700-kDa titin isoform, and its interaction with obscurin identify a novel Z-line to I-band linking system CIRCULATION RESEARCH. 2001 NOV 23; 89 (11): 1065-1072	4	175	3	39
#	Date / Author / Journal	LCS	GCS	LCR	CR
221	73 Cheung VG, Nowak N, Jang W, Kirsch IR, Zhao S, et al. Integration of cytogenetic landmarks into the draft sequence of the human genome NATURE. 2001 FEB 15; 409 (6822): 953-958	70	174	3	30
222	3809 Ast G How did alternative splicing evolve? NATURE REVIEWS GENETICS. 2004 OCT; 5 (10): 773-782	43	174	18	80
223	242 Mitchell KJ, Pinson KI, Kelly OG, Brennan J, Zupicich L, et al. Functional analysis of secreted and transmembrane proteins critical to mouse development NATURE GENETICS. 2001 JUL; 28 (3): 241-249	6	173	1	55
224	682 Hodgson G, Hager JH, Volik S, Hariono S, Wernick M, et al. Genome scanning with array CGH delineates regional alterations in mouse islet carcinomas NATURE GENETICS. 2001 DEC; 29 (4): 459-464	9	172	2	25
225	2182 Jordan IK, Rogozin IB, Glazko GV, Koonin EV Origin of a substantial fraction of human regulatory sequences from transposable elements TRENDS IN GENETICS. 2003 FEB; 19 (2): 68-72	78	172	2	22
226	2534 Rozen S, Skaletsky H, Marszalek JD, Minx PJ, Cordum HS, et al. Abundant gene conversion between arms of palindromes in human and ape Y chromosomes NATURE. 2003 JUN 19; 423 (6942): 873-876	26	172	4	28
227	269 Derkatch IL, Bradley ME, Hong JY, Liebman SW Prions affect the appearance of other prions: The story of [PIN+] CELL. 2001 JUL 27; 106 (2): 171-182	1	171	1	57
228	2331 Muller M, Kersten S Nutrigenomics: goals and strategies NATURE REVIEWS GENETICS. 2003 APR; 4 (4): 315-322	7	171	8	100
229	3740 Austin CP, Battey JF, Bradley A, Bucan M, Capecchi M, et al. The knockout mouse project NATURE GENETICS. 2004 SEP; 36 (9): 921-924	13	171	8	25
230	4243 Martens JHA, O'Sullivan RJ, Braunschweig U, Opravil S, Radolf M, et al. The profile of repeat-associated histone lysine methylation states in the mouse epigenome EMBO JOURNAL. 2005 FEB 23; 24 (4): 800-812	17	171	9	65
#	Date / Author / Journal	LCS	GCS	LCR	CR
231	1287 Fischer H, Koenig U, Eckhart L, Tschachler E Human caspase 12 has acquired deleterious mutations BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2002 MAY 3; 293 (2): 722-726	6	170	2	18
232	2739 Mizuno N, Niwa T, Yotsumoto Y, Sugiyama Y Impact of drug transporter studies on drug discovery and development PHARMACOLOGICAL REVIEWS. 2003 SEP; 55 (3): 425-461	2	169	3	387
233	2922 Margulies EH, Blanchette M, Haussler D, Green ED, NISC Comparative Sequencing Progra Identification and characterization of multi-species conserved sequences GENOME RESEARCH. 2003 DEC; 13 (12): 2507-2518	44	169	17	67
234	470 Boehm M, Bonifacino JS Adaptins - The final recount MOLECULAR BIOLOGY OF THE CELL. 2001 OCT; 12 (10): 2907-2920	1	168	2	98
235	1764 Rockman MV, Wray GA Abundant raw material for cis-regulatory evolution in humans MOLECULAR BIOLOGY AND EVOLUTION. 2002 NOV; 19 (11): 1991-2004	11	168	3	91
236	3555 Imanishi T, Itoh T, Suzuki Y, O'Donovan C, Fukuchi S, et al. Integrative annotation of 21,037 human genes validated by full-length cDNA clones PLOS BIOLOGY. 2004 JUN; 2 (6): Art. No. e162	0	168	18	116
237	72 Yu A, Zhao CF, Fan Y, Jang WH, Mungall AJ, et al. Comparison of human genetic and sequence-based physical maps NATURE. 2001 FEB 15; 409 (6822): 951-953	48	166	3	30
238	280 Zhang ZY Protein tyrosine phosphatases: prospects for therapeutics CURRENT OPINION IN CHEMICAL BIOLOGY. 2001 AUG; 5 (4): 416-423	8	166	1	61
239	1036 Wise A, Gearing K, Rees S Target validation of G-protein coupled receptors DRUG DISCOVERY TODAY. 2002 FEB 15; 7 (4): 235-246	21	166	2	84
240	2115 Crosson S, Rajagopal S, Moffat K The LOV domain family: Photoresponsive signaling modules coupled to diverse output domains BIOCHEMISTRY. 2003 JAN 14; 42 (1): 2-10	0	166	2	64
#	Date / Author / Journal	LCS	GCS	LCR	CR
241	134 Young AN, Amin MB, Moreno CS, Lim SD, Cohen C, et al. Expression profiling of renal epithelial neoplasms - A method for tumor classification and discovery of diagnostic molecular markers AMERICAN JOURNAL OF PATHOLOGY. 2001 MAY; 158 (5): 1639-1651	0	164	1	56
242	245 Eyre-Walker A, Hurst LD The evolution of isochores NATURE REVIEWS GENETICS. 2001 JUL; 2 (7): 549-555	72	164	2	63
243	1179 Anantharaman V, Koonin EV, Aravind L Comparative genomics and evolution of proteins involved in RNA metabolism NUCLEIC ACIDS RESEARCH. 2002 APR 1; 30 (7): 1427-1464	10	164	3	284
244	1466 Wu LF, Hughes TR, Davierwala AP, Robinson MD, Stoughton R, et al. Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters NATURE GENETICS. 2002 JUL; 31 (3): 255-265	7	164	2	41
245	1568 Gilbert N, Lutz-Prigge S, Moran JV Genomic deletions created upon LINE-1 retrotransposition CELL. 2002 AUG 9; 110 (3): 315-325	107	164	6	39
246	3983 McKinney MK, Cravatt BF Structure and function of fatty acid amide hydrolase ANNUAL REVIEW OF BIOCHEMISTRY. 2005; 74: 411-432	0	163	6	106
247	387 Eisenberg I, Avidan N, Potikha T, Hochner H, Chen M, et al. The UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase gene is mutated in recessive hereditary inclusion body myopathy NATURE GENETICS. 2001 SEP; 29 (1): 83-87	0	162	2	25
248	587 Eichler EE Recent duplication, domain accretion and the dynamic mutation of the human genome TRENDS IN GENETICS. 2001 NOV; 17 (11): 661-669	57	162	7	69
249	1546 Castillo-Davis CI, Mekhedov SL, Hartl DL, Koonin EV, Kondrashov FA Selection for short introns in highly expressed genes NATURE GENETICS. 2002 AUG; 31 (4): 415-418	26	162	1	30
250	1901 Spector DL The dynamics of chromosome organization and gene regulation ANNUAL REVIEW OF BIOCHEMISTRY. 2003; 72: 573-608	6	162	6	229
#	Date / Author / Journal	LCS	GCS	LCR	CR
251	3202 Lum PY, Armour CD, Stepaniants SB, Cavet G, Wolf MK, et al. Discovering modes of action for therapeutic compounds using a genome-wide screen of yeast heterozygotes CELL. 2004 JAN 9; 116 (1): 121-137	3	162	1	68
252	146 Yeh RF, Lim LP, Burge CB Computational inference of homologous gene structures in the human genome GENOME RESEARCH. 2001 MAY; 11 (5): 803-816	41	161	3	33
253	726 Jaffe AB, Hall A Rho GTPases in transformation and metastasis ADVANCES IN CANCER RESEARCH, VOL 84. 2002; 84: 57-80	0	161	2	117
254	1372 Cheng SH, Willmann MR, Chen HC, Sheen J Calcium signaling through protein kinases. The Arabidopsis calcium-dependent protein kinase gene family PLANT PHYSIOLOGY. 2002 JUN; 129 (2): 469-485	1	161	2	154
255	1656 Hahn ME Aryl hydrocarbon receptors: diversity and evolution CHEMICO-BIOLOGICAL INTERACTIONS. 2002 SEP 20; 141 (1-2): 131-160	2	161	4	205
256	5400 Pollard KS, Salama SR, Lambert N, Lambot MA, Coppens S, et al. An RNA gene expressed during cortical development evolved rapidly in humans NATURE. 2006 SEP 14; 443 (7108): 167-172	20	161	7	41
257	2658 Ewart-Toland A, Briassouli P, de Koning JP, Mao JH, Yuan JW, et al. Identification of Stk6/STK15 as a candidate low-penetrance tumor-susceptibility gene in mouse and human NATURE GENETICS. 2003 AUG; 34 (4): 403-412	2	160	3	39
258	2805 Ge H, Walhout AJM, Vidal M Integrating 'omic' information: a bridge between genomics and systems biology TRENDS IN GENETICS. 2003 OCT; 19 (10): 551-560	13	160	8	64
259	404 Tutt A, Bertwistle D, Valentine J, Gabriel A, Swift S, et al. Mutation in Brca2 stimulates error-prone homology-directed repair of DNA double-strand breaks occurring between repeated sequences EMBO JOURNAL. 2001 SEP 3; 20 (17): 4704-4716	6	159	1	61
260	1098 Chen MS, Presting G, Barbazuk WB, Goicoechea JL, Blackmon B, et al. An integrated physical and genetic map of the rice genome PLANT CELL. 2002 MAR; 14 (3): 537-545	10	159	2	31
#	Date / Author / Journal	LCS	GCS	LCR	CR
261	2767 Bailey JA, Liu G, Eichler EE An Alu transposition model for the origin and expansion of human segmental duplications AMERICAN JOURNAL OF HUMAN GENETICS. 2003 OCT; 73 (4): 823-834	75	159	11	37
262	3937 Horton R, Wilming L, Rand V, Lovering RC, Bruford EA, et al. Gene map of the extended human MHC NATURE REVIEWS GENETICS. 2004 DEC; 5 (12): 889-899	4	158	9	99
263	1291 Clark TA, Sugnet CW, Ares M Genomewide analysis of mRNA processing in yeast using splicing-specific microarrays SCIENCE. 2002 MAY 3; 296 (5569): 907-910	29	157	2	27
264	2445 Lev-Maor G, Sorek R, Shomron N, Ast G The birth of an alternatively spliced exon: 3 ' splice-site selection in Alu exons SCIENCE. 2003 MAY 23; 300 (5623): 1288-1291	82	157	3	26
265	2275 Rakyan VK, Chong S, Champ ME, Cuthbert PC, Morgan HD, et al. Transgenerational inheritance of epigenetic states at the murine Axin(Fu) allele occurs after maternal and paternal transmission PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 MAR 4; 100 (5): 2538-2543	15	156	1	25
266	2889 Christmann M, Tomicic MT, Roos WP, Kaina B Mechanisms of human DNA repair: an update TOXICOLOGY. 2003 NOV 15; 193 (1-2): 3-34	0	156	2	388
267	2676 Eichler EE, Sankoff D Structural dynamics of eukaryotic chromosome evolution SCIENCE. 2003 AUG 8; 301 (5634): 793-797	33	155	22	60
268	3521 Babu MM, Luscombe NM, Aravind L, Gerstein M, Teichmann SA Structure and evolution of transcriptional regulatory networks CURRENT OPINION IN STRUCTURAL BIOLOGY. 2004 JUN; 14 (3): 283-291	4	155	4	42
269	876 Bourque G, Pevzner PA Genome-scale evolution: Reconstructing gene orders in the ancestral species GENOME RESEARCH. 2002 JAN; 12 (1): 26-36	14	154	2	39
270	235 Hesse M, Magin TM, Weber K Genes for intermediate filament proteins and the draft sequence of the human genome: novel keratin genes and a surprisingly high number of pseudogenes related to keratin genes 8 and 18 JOURNAL OF CELL SCIENCE. 2001 JUL; 114 (14): 2569-2575	5	153	1	43
#	Date / Author / Journal	LCS	GCS	LCR	CR
271	453 Meyers BC, Tingley SV, Morgante M Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome GENOME RESEARCH. 2001 OCT; 11 (10): 1660-1676	28	153	2	63
272	929 Boulton SJ, Gartner A, Reboul J, Vaglio P, Dyson N, et al. Combined functional genomic maps of the C-elegans DNA damage response SCIENCE. 2002 JAN 4; 295 (5552): 127-131	9	153	3	28
273	1617 Vinson C, Myakishev M, Acharya A, Mir AA, Moll JR, et al. Classification of human B-ZIP proteins based on dimerization properties MOLECULAR AND CELLULAR BIOLOGY. 2002 SEP; 22 (18): 6321-6335	2	153	2	105
274	706 Hofreiter M, Jaenicke V, Serre D, von Haeseler A, Paabo S DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA NUCLEIC ACIDS RESEARCH. 2001 DEC 1; 29 (23): 4793-4799	3	152	1	29
275	1371 Gu X, Wang YF, Gu JY Age distribution of human gene families shows significant roles of both large-and small-scale duplications in vertebrate evolution NATURE GENETICS. 2002 JUN; 31 (2): 205-209	33	152	6	30
276	1569 Symer DE, Connelly C, Szak ST, Caputo EM, Cost GJ, et al. Human L1 retrotransposition is associated with genetic instability in vivo CELL. 2002 AUG 9; 110 (3): 327-338	104	152	6	35
277	1699 Mathe C, Sagot MF, Schiex T, Rouze P Current methods of gene prediction, their strengths and weaknesses NUCLEIC ACIDS RESEARCH. 2002 OCT 1; 30 (19): 4103-4117	21	152	7	156
278	3184 Ebnet K, Suzuki A, Ohno S, Vestweber D Junctional adhesion molecules (JAMs): more molecules with dual functions? JOURNAL OF CELL SCIENCE. 2004 JAN 1; 117 (1): 19-29	0	152	2	106
279	3476 Pagani F, Baralle FE Genomic variants in exons and introns: identifying the splicing spoilers NATURE REVIEWS GENETICS. 2004 MAY; 5 (5): 389-U2	11	152	8	63
280	261 Dehal P, Predki P, Olsen AS, Kobayashi A, Folta P, et al. Human chromosome 19 and related regions in mouse: Conservative and lineage-specific evolution SCIENCE. 2001 JUL 6; 293 (5527): 104-111	70	151	2	35
#	Date / Author / Journal	LCS	GCS	LCR	CR
281	932 Ding YC, Chi HC, Grady DL, Morishima A, Kidd JR, et al. Evidence of positive selection acting at the human dopamine receptor D4 gene locus PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 JAN 8; 99 (1): 309-314	4	151	2	36
282	2062 Hardison RC, Roskin KM, Yang S, Diekhans M, Kent WJ, et al. Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution GENOME RESEARCH. 2003 JAN; 13 (1): 13-26	58	151	12	87
283	2572 Nakai H, Montini E, Fuess S, Storm TA, Grompe M, et al. AAV serotype 2 vectors preferentially integrate into active genes in mice NATURE GENETICS. 2003 JUL; 34 (3): 297-302	5	151	5	29
284	4614 Covert MW, Leung TH, Gaston JE, Baltimore D Achieving stability of lipopolysaccharide-induced NF-kappa B activation SCIENCE. 2005 SEP 16; 309 (5742): 1854-1857	0	151	1	26
285	6465 Manolio TA, Brooks LD, Collins FS A HapMap harvest of insights into the genetics of common disease JOURNAL OF CLINICAL INVESTIGATION. 2008 MAY; 118 (5): 1590-1605	11	151	7	138
286	437 Cremer M, von Hase J, Volm T, Brero A, Kreth G, et al. Non-random radial higher-order chromatin arrangements in nuclei of diploid human cells CHROMOSOME RESEARCH. 2001 OCT; 9 (7): 541-567	5	150	2	73
287	2283 Mirzadegan T, Benko G, Filipek S, Palczewski K Sequence analyses of G-protein-coupled receptors: Similarities to rhodopsin BIOCHEMISTRY. 2003 MAR 18; 42 (10): 2759-2767	2	150	3	61
288	3959 Dobson CM Chemical space and biology NATURE. 2004 DEC 16; 432 (7019): 824-828	1	150	4	44
289	510 Johnson ME, Viggiano L, Bailey JA, Abdul-Rauf M, Goodwin G, et al. Positive selection of a gene family during the emergence of humans and African apes NATURE. 2001 OCT 4; 413 (6855): 514-519	48	149	2	22
290	5478 Green RE, Krause J, Ptak SE, Briggs AW, Ronan MT, et al. Analysis of one million base pairs of Neanderthal DNA NATURE. 2006 NOV 16; 444 (7117): 330-336	14	149	7	50
#	Date / Author / Journal	LCS	GCS	LCR	CR
291	561 Cutler DJ, Zwick ME, Carrasquillo MM, Yohn CT, Tobin KP, et al. High-throughput variation detection and genotyping using microarrays GENOME RESEARCH. 2001 NOV; 11 (11): 1913-1925	9	148	2	40
292	4288 Roh TY, Cuddapah S, Zhao K Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping GENES & DEVELOPMENT. 2005 MAR 1; 19 (5): 542-552	8	148	5	52
293	812 Hardison RC, Chui DHK, Giardine B, Riemer C, Patrinos GP, et al. HbVar. A relational database of human hemoglobin variants and thalassemia mutations at the globin gene server HUMAN MUTATION. 2002; 19 (3): 225-233	2	147	2	30
294	3087 Owen MJ, Williams NM, O'Donovan MC The molecular genetics of schizophrenia: findings promise new insights MOLECULAR PSYCHIATRY. 2004; 9 (1): 14-27	2	147	6	147
295	424 Lim LP, Burge CB A computational analysis of sequence features involved in recognition of short introns PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2001 SEP 25; 98 (20): 11193-11198	31	146	1	29
296	629 Wade PA Methyl CpG-binding transcriptional proteins and repression BIOESSAYS. 2001 DEC; 23 (12): 1131-1137	6	146	2	41
297	1471 Van der Hoeven R, Ronning C, Giovannoni J, Martin G, Tanksley S Deductions about the number, organization, and evolution of genes in the tomato genome based on analysis of a large expressed sequence tag collection and selective genomic sequencing PLANT CELL. 2002 JUL; 14 (7): 1441-1456	2	146	1	35
298	1826 Katoh M Paradigm shift in gene-finding method: From bench-top approach to desk-top approach (review) INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE. 2002 DEC; 10 (6): 677-682	0	146	3	89
299	2370 Brouha B, Schustak J, Badge RM, Lutz-Prigget S, Farley AH, et al. Hot L1s account for the bulk of retrotransposition in the human population PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 APR 29; 100 (9): 5280-5285	121	146	9	41
300	3274 Sorek R, Shamir R, Ast G How prevalent is functional alternative splicing in the human genome? TRENDS IN GENETICS. 2004 FEB; 20 (2): 68-71	41	146	12	21

Date / Author / Journal

LCS

GCS

LCR

201

6289 Flicek P, Aken BL, Beal K, Ballester B, Caccamo M, et al.

Ensembl 2008

NUCLEIC ACIDS RESEARCH. 2008 JAN; 36: D707-D714

192

202

2770 Mattick JS

Challenging the dogma: the hidden layer of non-protein-coding RNAs in complex organisms

BIOESSAYS. 2003 OCT; 25 (10): 930-939

191

104

203

348 Wiltshire S, Hattersley AT, Hitman GA, Walker M, Levy JC, et al.

A genomewide scan for loci predisposing to type 2 diabetes in a UK population (the Diabetes UK Warren 2 repository): Analysis of 573 pedigrees provides independent replication of a susceptibility locus on chromosome 1q

AMERICAN JOURNAL OF HUMAN GENETICS. 2001 SEP; 69 (3): 553-569

189

204

164 Schwartz RS

Racial profiling in medical research.

NEW ENGLAND JOURNAL OF MEDICINE. 2001 MAY 3; 344 (18): 1392-1393

188

205

499 Feller SM

Crk family adaptors - signalling complex formation and biological roles

ONCOGENE. 2001 OCT 1; 20 (44): 6348-6371

188

367

206

1442 Sorek R, Ast G, Graur D

Alu-containing exons are alternatively spliced

GENOME RESEARCH. 2002 JUL; 12 (7): 1060-1067

188

207

1316 Mural RJ, Adams MD, Myers EW, Smith HO, Miklos GLG, et al.

A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome

SCIENCE. 2002 MAY 31; 296 (5573): 1661-1671

184

208

5511 Eckhardt F, Lewin J, Cortese R, Rakyan VK, Attwood J, et al.

DNA methylation profiling of human chromosomes 6, 20 and 22

NATURE GENETICS. 2006 DEC; 38 (12): 1378-1385

184

209

2120 Mootha VK, Lepage P, Miller K, Bunkenborg J, Reich M, et al.

Identification of a gene causing human cytochrome c oxidase deficiency by integrative genomics

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 JAN 21; 100 (2): 605-610

183

210

2618 Suckau D, Resemann A, Schuerenberg M, Hufnagel P, Franzen J, et al.

A novel MALDI LIFT-TOF/TOF mass spectrometer for proteomics

ANALYTICAL AND BIOANALYTICAL CHEMISTRY. 2003 AUG; 376 (7): 952-965

183

Date / Author / Journal

LCS

GCS

LCR

211

2253 Zhang DX, Hewitt GM

Nuclear DNA analyses in genetic studies of populations: practice, problems and prospects

MOLECULAR ECOLOGY. 2003 MAR; 12 (3): 563-584

182

208

212

2488 Miano JM

Serum response factor: toggling between disparate programs of gene expression

JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY. 2003 JUN; 35 (6): 577-593

182

185

213

1640 Xu Q, Modrek B, Lee C

Genome-wide detection of tissue-specific alternative splicing in the human transcriptome

NUCLEIC ACIDS RESEARCH. 2002 SEP 1; 30 (17): 3754-3766

180

214

3471 Garcia-Blanco MA, Baraniak AP, Lasda EL

Alternative splicing in disease and therapy

NATURE BIOTECHNOLOGY. 2004 MAY; 22 (5): 535-546

180

187

215

1576 Gregory SG, Sekhon M, Schein J, Zhao SY, Osoegawa K, et al.

A physical map of the mouse genome

NATURE. 2002 AUG 15; 418 (6899): 743-U3

179

216

2412 Reboul J, Vaglio P, Rual JF, Lamesch P, Martinez M, et al.

C-elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression

NATURE GENETICS. 2003 MAY; 34 (1): 35-41

179

217

5257 Sabeti PC, Schaffner SF, Fry B, Lohmueller J, Varilly P, et al.

Positive natural selection in the human lineage

SCIENCE. 2006 JUN 16; 312 (5780): 1614-1620

177

218

1768 Cowles CR, Hirschhorn JN, Altshuler D, Lander ES

Detection of regulatory variation in mouse genes

NATURE GENETICS. 2002 NOV; 32 (3): 432-437

176

219

4545 Morison IM, Ramsay JP, Spencer HG

A census of mammalian imprinting

TRENDS IN GENETICS. 2005 AUG; 21 (8): 457-465

176

220

615 Bang ML, Centner T, Fornoff F, Geach AJ, Gotthardt M, et al.

The complete gene sequence of titin, expression of an unusual approximate to 700-kDa titin isoform, and its interaction with obscurin identify a novel Z-line to I-band linking system

CIRCULATION RESEARCH. 2001 NOV 23; 89 (11): 1065-1072

175

Date / Author / Journal

LCS

GCS

LCR

221

73 Cheung VG, Nowak N, Jang W, Kirsch IR, Zhao S, et al.

Integration of cytogenetic landmarks into the draft sequence of the human genome

NATURE. 2001 FEB 15; 409 (6822): 953-958

174

222

3809 Ast G

How did alternative splicing evolve?

NATURE REVIEWS GENETICS. 2004 OCT; 5 (10): 773-782

174

223

242 Mitchell KJ, Pinson KI, Kelly OG, Brennan J, Zupicich L, et al.

Functional analysis of secreted and transmembrane proteins critical to mouse development

NATURE GENETICS. 2001 JUL; 28 (3): 241-249

173

224

682 Hodgson G, Hager JH, Volik S, Hariono S, Wernick M, et al.

Genome scanning with array CGH delineates regional alterations in mouse islet carcinomas

NATURE GENETICS. 2001 DEC; 29 (4): 459-464

172

225

2182 Jordan IK, Rogozin IB, Glazko GV, Koonin EV

Origin of a substantial fraction of human regulatory sequences from transposable elements

TRENDS IN GENETICS. 2003 FEB; 19 (2): 68-72

172

226

2534 Rozen S, Skaletsky H, Marszalek JD, Minx PJ, Cordum HS, et al.

Abundant gene conversion between arms of palindromes in human and ape Y chromosomes

NATURE. 2003 JUN 19; 423 (6942): 873-876

172

227

269 Derkatch IL, Bradley ME, Hong JY, Liebman SW

Prions affect the appearance of other prions: The story of [PIN+]

CELL. 2001 JUL 27; 106 (2): 171-182

171

228

2331 Muller M, Kersten S

Nutrigenomics: goals and strategies

NATURE REVIEWS GENETICS. 2003 APR; 4 (4): 315-322

171

100

229

3740 Austin CP, Battey JF, Bradley A, Bucan M, Capecchi M, et al.

The knockout mouse project

NATURE GENETICS. 2004 SEP; 36 (9): 921-924

171

230

4243 Martens JHA, O'Sullivan RJ, Braunschweig U, Opravil S, Radolf M, et al.

The profile of repeat-associated histone lysine methylation states in the mouse epigenome

EMBO JOURNAL. 2005 FEB 23; 24 (4): 800-812

171

Date / Author / Journal

LCS

GCS

LCR

231

1287 Fischer H, Koenig U, Eckhart L, Tschachler E

Human caspase 12 has acquired deleterious mutations

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2002 MAY 3; 293 (2): 722-726

170

232

2739 Mizuno N, Niwa T, Yotsumoto Y, Sugiyama Y

Impact of drug transporter studies on drug discovery and development

PHARMACOLOGICAL REVIEWS. 2003 SEP; 55 (3): 425-461

169

387

233

2922 Margulies EH, Blanchette M, Haussler D, Green ED, NISC Comparative Sequencing Progra

Identification and characterization of multi-species conserved sequences

GENOME RESEARCH. 2003 DEC; 13 (12): 2507-2518

169

234

470 Boehm M, Bonifacino JS

Adaptins - The final recount

MOLECULAR BIOLOGY OF THE CELL. 2001 OCT; 12 (10): 2907-2920

168

235

1764 Rockman MV, Wray GA

Abundant raw material for cis-regulatory evolution in humans

MOLECULAR BIOLOGY AND EVOLUTION. 2002 NOV; 19 (11): 1991-2004

168

236

3555 Imanishi T, Itoh T, Suzuki Y, O'Donovan C, Fukuchi S, et al.

Integrative annotation of 21,037 human genes validated by full-length cDNA clones

PLOS BIOLOGY. 2004 JUN; 2 (6): Art. No. e162

168

116

237

72 Yu A, Zhao CF, Fan Y, Jang WH, Mungall AJ, et al.

Comparison of human genetic and sequence-based physical maps

NATURE. 2001 FEB 15; 409 (6822): 951-953

166

238

280 Zhang ZY

Protein tyrosine phosphatases: prospects for therapeutics

CURRENT OPINION IN CHEMICAL BIOLOGY. 2001 AUG; 5 (4): 416-423

166

239

1036 Wise A, Gearing K, Rees S

Target validation of G-protein coupled receptors

DRUG DISCOVERY TODAY. 2002 FEB 15; 7 (4): 235-246

166

240

2115 Crosson S, Rajagopal S, Moffat K

The LOV domain family: Photoresponsive signaling modules coupled to diverse output domains

BIOCHEMISTRY. 2003 JAN 14; 42 (1): 2-10

166

Date / Author / Journal

LCS

GCS

LCR

241

134 Young AN, Amin MB, Moreno CS, Lim SD, Cohen C, et al.

Expression profiling of renal epithelial neoplasms - A method for tumor classification and discovery of diagnostic molecular markers

AMERICAN JOURNAL OF PATHOLOGY. 2001 MAY; 158 (5): 1639-1651

164

242

245 Eyre-Walker A, Hurst LD

The evolution of isochores

NATURE REVIEWS GENETICS. 2001 JUL; 2 (7): 549-555

164

243

1179 Anantharaman V, Koonin EV, Aravind L

Comparative genomics and evolution of proteins involved in RNA metabolism

NUCLEIC ACIDS RESEARCH. 2002 APR 1; 30 (7): 1427-1464

164

284

244

1466 Wu LF, Hughes TR, Davierwala AP, Robinson MD, Stoughton R, et al.

Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters

NATURE GENETICS. 2002 JUL; 31 (3): 255-265

164

245

1568 Gilbert N, Lutz-Prigge S, Moran JV

Genomic deletions created upon LINE-1 retrotransposition

CELL. 2002 AUG 9; 110 (3): 315-325

107

164

246

3983 McKinney MK, Cravatt BF

Structure and function of fatty acid amide hydrolase

ANNUAL REVIEW OF BIOCHEMISTRY. 2005; 74: 411-432

163

106

247

387 Eisenberg I, Avidan N, Potikha T, Hochner H, Chen M, et al.

The UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase gene is mutated in recessive hereditary inclusion body myopathy

NATURE GENETICS. 2001 SEP; 29 (1): 83-87

162

248

587 Eichler EE

Recent duplication, domain accretion and the dynamic mutation of the human genome

TRENDS IN GENETICS. 2001 NOV; 17 (11): 661-669

162

249

1546 Castillo-Davis CI, Mekhedov SL, Hartl DL, Koonin EV, Kondrashov FA

Selection for short introns in highly expressed genes

NATURE GENETICS. 2002 AUG; 31 (4): 415-418

162

250

1901 Spector DL

The dynamics of chromosome organization and gene regulation

ANNUAL REVIEW OF BIOCHEMISTRY. 2003; 72: 573-608

162

229

Date / Author / Journal

LCS

GCS

LCR

251

3202 Lum PY, Armour CD, Stepaniants SB, Cavet G, Wolf MK, et al.

Discovering modes of action for therapeutic compounds using a genome-wide screen of yeast heterozygotes

CELL. 2004 JAN 9; 116 (1): 121-137

162

252

146 Yeh RF, Lim LP, Burge CB

Computational inference of homologous gene structures in the human genome

GENOME RESEARCH. 2001 MAY; 11 (5): 803-816

161

253

726 Jaffe AB, Hall A

Rho GTPases in transformation and metastasis

ADVANCES IN CANCER RESEARCH, VOL 84. 2002; 84: 57-80

161

117

254

1372 Cheng SH, Willmann MR, Chen HC, Sheen J

Calcium signaling through protein kinases. The Arabidopsis calcium-dependent protein kinase gene family

PLANT PHYSIOLOGY. 2002 JUN; 129 (2): 469-485

161

154

255

1656 Hahn ME

Aryl hydrocarbon receptors: diversity and evolution

CHEMICO-BIOLOGICAL INTERACTIONS. 2002 SEP 20; 141 (1-2): 131-160

161

205

256

5400 Pollard KS, Salama SR, Lambert N, Lambot MA, Coppens S, et al.

An RNA gene expressed during cortical development evolved rapidly in humans

NATURE. 2006 SEP 14; 443 (7108): 167-172

161

257

2658 Ewart-Toland A, Briassouli P, de Koning JP, Mao JH, Yuan JW, et al.

Identification of Stk6/STK15 as a candidate low-penetrance tumor-susceptibility gene in mouse and human

NATURE GENETICS. 2003 AUG; 34 (4): 403-412

160

258

2805 Ge H, Walhout AJM, Vidal M

Integrating 'omic' information: a bridge between genomics and systems biology

TRENDS IN GENETICS. 2003 OCT; 19 (10): 551-560

160

259

404 Tutt A, Bertwistle D, Valentine J, Gabriel A, Swift S, et al.

Mutation in Brca2 stimulates error-prone homology-directed repair of DNA double-strand breaks occurring between repeated sequences

EMBO JOURNAL. 2001 SEP 3; 20 (17): 4704-4716

159

260

1098 Chen MS, Presting G, Barbazuk WB, Goicoechea JL, Blackmon B, et al.

An integrated physical and genetic map of the rice genome

PLANT CELL. 2002 MAR; 14 (3): 537-545

159

Date / Author / Journal

LCS

GCS

LCR

261

2767 Bailey JA, Liu G, Eichler EE

An Alu transposition model for the origin and expansion of human segmental duplications

AMERICAN JOURNAL OF HUMAN GENETICS. 2003 OCT; 73 (4): 823-834

159

262

3937 Horton R, Wilming L, Rand V, Lovering RC, Bruford EA, et al.

Gene map of the extended human MHC

NATURE REVIEWS GENETICS. 2004 DEC; 5 (12): 889-899

158

263

1291 Clark TA, Sugnet CW, Ares M

Genomewide analysis of mRNA processing in yeast using splicing-specific microarrays

SCIENCE. 2002 MAY 3; 296 (5569): 907-910

157

264

2445 Lev-Maor G, Sorek R, Shomron N, Ast G

The birth of an alternatively spliced exon: 3 ' splice-site selection in Alu exons

SCIENCE. 2003 MAY 23; 300 (5623): 1288-1291

157

265

2275 Rakyan VK, Chong S, Champ ME, Cuthbert PC, Morgan HD, et al.

Transgenerational inheritance of epigenetic states at the murine Axin(Fu) allele occurs after maternal and paternal transmission

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 MAR 4; 100 (5): 2538-2543

156

266

2889 Christmann M, Tomicic MT, Roos WP, Kaina B

Mechanisms of human DNA repair: an update

TOXICOLOGY. 2003 NOV 15; 193 (1-2): 3-34

156

388

267

2676 Eichler EE, Sankoff D

Structural dynamics of eukaryotic chromosome evolution

SCIENCE. 2003 AUG 8; 301 (5634): 793-797

155

268

3521 Babu MM, Luscombe NM, Aravind L, Gerstein M, Teichmann SA

Structure and evolution of transcriptional regulatory networks

CURRENT OPINION IN STRUCTURAL BIOLOGY. 2004 JUN; 14 (3): 283-291

155

269

876 Bourque G, Pevzner PA

Genome-scale evolution: Reconstructing gene orders in the ancestral species

GENOME RESEARCH. 2002 JAN; 12 (1): 26-36

154

270

235 Hesse M, Magin TM, Weber K

Genes for intermediate filament proteins and the draft sequence of the human genome: novel keratin genes and a surprisingly high number of pseudogenes related to keratin genes 8 and 18

JOURNAL OF CELL SCIENCE. 2001 JUL; 114 (14): 2569-2575

153

Date / Author / Journal

LCS

GCS

LCR

271

453 Meyers BC, Tingley SV, Morgante M

Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome

GENOME RESEARCH. 2001 OCT; 11 (10): 1660-1676

153

272

929 Boulton SJ, Gartner A, Reboul J, Vaglio P, Dyson N, et al.

Combined functional genomic maps of the C-elegans DNA damage response

SCIENCE. 2002 JAN 4; 295 (5552): 127-131

153

273

1617 Vinson C, Myakishev M, Acharya A, Mir AA, Moll JR, et al.

Classification of human B-ZIP proteins based on dimerization properties

MOLECULAR AND CELLULAR BIOLOGY. 2002 SEP; 22 (18): 6321-6335

153

105

274

706 Hofreiter M, Jaenicke V, Serre D, von Haeseler A, Paabo S

DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA

NUCLEIC ACIDS RESEARCH. 2001 DEC 1; 29 (23): 4793-4799

152

275

1371 Gu X, Wang YF, Gu JY

Age distribution of human gene families shows significant roles of both large-and small-scale duplications in vertebrate evolution

NATURE GENETICS. 2002 JUN; 31 (2): 205-209

152

276

1569 Symer DE, Connelly C, Szak ST, Caputo EM, Cost GJ, et al.

Human L1 retrotransposition is associated with genetic instability in vivo

CELL. 2002 AUG 9; 110 (3): 327-338

104

152

277

1699 Mathe C, Sagot MF, Schiex T, Rouze P

Current methods of gene prediction, their strengths and weaknesses

NUCLEIC ACIDS RESEARCH. 2002 OCT 1; 30 (19): 4103-4117

152

156

278

3184 Ebnet K, Suzuki A, Ohno S, Vestweber D

Junctional adhesion molecules (JAMs): more molecules with dual functions?

JOURNAL OF CELL SCIENCE. 2004 JAN 1; 117 (1): 19-29

152

106

279

3476 Pagani F, Baralle FE

Genomic variants in exons and introns: identifying the splicing spoilers

NATURE REVIEWS GENETICS. 2004 MAY; 5 (5): 389-U2

152

280

261 Dehal P, Predki P, Olsen AS, Kobayashi A, Folta P, et al.

Human chromosome 19 and related regions in mouse: Conservative and lineage-specific evolution

SCIENCE. 2001 JUL 6; 293 (5527): 104-111

151

Date / Author / Journal

LCS

GCS

LCR

281

932 Ding YC, Chi HC, Grady DL, Morishima A, Kidd JR, et al.

Evidence of positive selection acting at the human dopamine receptor D4 gene locus

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 JAN 8; 99 (1): 309-314

151

282

2062 Hardison RC, Roskin KM, Yang S, Diekhans M, Kent WJ, et al.

Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution

GENOME RESEARCH. 2003 JAN; 13 (1): 13-26

151

283

2572 Nakai H, Montini E, Fuess S, Storm TA, Grompe M, et al.

AAV serotype 2 vectors preferentially integrate into active genes in mice

NATURE GENETICS. 2003 JUL; 34 (3): 297-302

151

284

4614 Covert MW, Leung TH, Gaston JE, Baltimore D

Achieving stability of lipopolysaccharide-induced NF-kappa B activation

SCIENCE. 2005 SEP 16; 309 (5742): 1854-1857

151

285

6465 Manolio TA, Brooks LD, Collins FS

A HapMap harvest of insights into the genetics of common disease

JOURNAL OF CLINICAL INVESTIGATION. 2008 MAY; 118 (5): 1590-1605

151

138

286

437 Cremer M, von Hase J, Volm T, Brero A, Kreth G, et al.

Non-random radial higher-order chromatin arrangements in nuclei of diploid human cells

CHROMOSOME RESEARCH. 2001 OCT; 9 (7): 541-567

150

287

2283 Mirzadegan T, Benko G, Filipek S, Palczewski K

Sequence analyses of G-protein-coupled receptors: Similarities to rhodopsin

BIOCHEMISTRY. 2003 MAR 18; 42 (10): 2759-2767

150

288

3959 Dobson CM

Chemical space and biology

NATURE. 2004 DEC 16; 432 (7019): 824-828

150

289

510 Johnson ME, Viggiano L, Bailey JA, Abdul-Rauf M, Goodwin G, et al.

Positive selection of a gene family during the emergence of humans and African apes

NATURE. 2001 OCT 4; 413 (6855): 514-519

149

290

5478 Green RE, Krause J, Ptak SE, Briggs AW, Ronan MT, et al.

Analysis of one million base pairs of Neanderthal DNA

NATURE. 2006 NOV 16; 444 (7117): 330-336

149

Date / Author / Journal

LCS

GCS

LCR

291

561 Cutler DJ, Zwick ME, Carrasquillo MM, Yohn CT, Tobin KP, et al.

High-throughput variation detection and genotyping using microarrays

GENOME RESEARCH. 2001 NOV; 11 (11): 1913-1925

148

292

4288 Roh TY, Cuddapah S, Zhao K

Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping

GENES & DEVELOPMENT. 2005 MAR 1; 19 (5): 542-552

148

293

812 Hardison RC, Chui DHK, Giardine B, Riemer C, Patrinos GP, et al.

HbVar. A relational database of human hemoglobin variants and thalassemia mutations at the globin gene server

HUMAN MUTATION. 2002; 19 (3): 225-233

147

294

3087 Owen MJ, Williams NM, O'Donovan MC

The molecular genetics of schizophrenia: findings promise new insights

MOLECULAR PSYCHIATRY. 2004; 9 (1): 14-27

147

295

424 Lim LP, Burge CB

A computational analysis of sequence features involved in recognition of short introns

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2001 SEP 25; 98 (20): 11193-11198

146

296

629 Wade PA

Methyl CpG-binding transcriptional proteins and repression

BIOESSAYS. 2001 DEC; 23 (12): 1131-1137

146

297

1471 Van der Hoeven R, Ronning C, Giovannoni J, Martin G, Tanksley S

Deductions about the number, organization, and evolution of genes in the tomato genome based on analysis of a large expressed sequence tag collection and selective genomic sequencing

PLANT CELL. 2002 JUL; 14 (7): 1441-1456

146

298

1826 Katoh M

Paradigm shift in gene-finding method: From bench-top approach to desk-top approach (review)

INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE. 2002 DEC; 10 (6): 677-682

146

299

2370 Brouha B, Schustak J, Badge RM, Lutz-Prigget S, Farley AH, et al.

Hot L1s account for the bulk of retrotransposition in the human population

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 APR 29; 100 (9): 5280-5285

121

146

300

3274 Sorek R, Shamir R, Ast G

How prevalent is functional alternative splicing in the human genome?

TRENDS IN GENETICS. 2004 FEB; 20 (2): 68-71

146

Initial sequencing and analysis of the human genome (Lander) The papers citing Lander ES, et al. "Initial sequencing and analysis of the human genome." NATURE. 2001 FEB 15; 409 (6822): 860-921	Historiographs	Glossary HistCite Guide About Grand Totals: LCS 38623, GCS 253809, CR 422506 Collection span: 2000 - 2010
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