HistCite - Initial sequencing and analysis of the human genome (Lander)

Add FileX ?

Use wildcard '*' to add more than one file at a time. For example, if you have file1, file2, etc. all in the same folder or directory; first, locate one of the files with the [Browse...] button. Then alter the file path in the box above to include '*' character (eg. file*). Wildcard '?' to blanket only one character works too.
Note: In Windows you can select multiple files and "drag and drop" them onto HistCite icon or shortcut. The program would start and load those files.

#	Date / Author / Journal	LCS	GCS	LCR	CR
2601	5476 Ichiyanagi K, Okada N Genomic alterations upon integration of zebrafish L1 elements revealed by the TANT method GENE. 2006 NOV 15; 383: 108-116	1	4	19	52
2602	5541 Melodelima C, Gueguen L, Piau D, Gautier C A computational prediction of isochores based on hidden Markov models GENE. 2006 DEC 30; 385: 41-49	2	6	7	30
2603	5542 Duret L, Eyre-Walker A, Galtier N A new perspective on isochore evolution GENE. 2006 DEC 30; 385: 71-74	6	31	20	35
2604	5679 Costa FF Non-coding RNAs: Lost in translation? GENE. 2007 JAN 15; 386 (1-2): 1-10	1	37	8	68
2605	5723 Takashima Y, Bando T, Kagawa H A novel non-coding DNA family in Caenorhabditis elegans GENE. 2007 FEB 15; 388 (1-2): 61-73	0	0	2	41
2606	5757 Smith CD, Edgar RC, Yandell MD, Smith DR, Celniker SE, et al. Improved repeat identification and masking in Dipterans GENE. 2007 MAR 1; 389 (1): 1-9	4	8	11	49
2607	5769 Sakai H, Koyanagi KO, Imanishi T, Itoh T, Gojobori T Frequent emergence and functional resurrection of processed pseudogenes in the human and mouse genomes GENE. 2007 MAR 15; 389 (2): 196-203	3	8	13	54
2608	5806 Pritham EJ, Putliwala T, Feschotte C Mavericks, a novel class of giant transposable elements widespread in eukaryotes and related to DNA viruses GENE. 2007 APR 1; 390 (1-2): 3-17	6	19	9	78
2609	5807 Lee J, Cordaux R, Han KD, Wang JX, Hedges DJ, et al. Different evolutionary fates of recently integrated human and chimpanzee LINE-1 retrotransposons GENE. 2007 APR 1; 390 (1-2): 18-27	4	5	24	53
2610	5808 Konkel MK, Wang JX, Liang P, Batzer MA Identification and characterization of novel polymorphic LINE-1 insertions through comparison of two human genome sequence assemblies GENE. 2007 APR 1; 390 (1-2): 28-38	2	3	31	75
#	Date / Author / Journal	LCS	GCS	LCR	CR
2611	5809 Herke SW, Xing J, Ray DA, Zimmerman JW, Cordaux R, et al. A SINE-based dichotomous key for primate identification GENE. 2007 APR 1; 390 (1-2): 39-51	2	4	12	59
2612	5810 Fablet M, Rebollo R, Biemont C, Vieira C The evolution of retrotransposon regulatory regions and its consequences on the Drosophila melanogaster and Homo sapiens host genomes GENE. 2007 APR 1; 390 (1-2): 84-91	1	2	21	86
2613	5811 Belancio VP, Whelton M, Deininger P Requirements for polyadenylation at the 3 ' end of LINE-1 elements GENE. 2007 APR 1; 390 (1-2): 98-107	4	3	11	38
2614	5812 Zhi DG Sequence correlation between neighboring Alu instances suggests post-retrotransposition sequence exchange due to Alu gene conversion GENE. 2007 APR 1; 390 (1-2): 117-121	2	4	5	14
2615	5813 Lebedev YB, Amosova AL, Mamedov IZ, Fisunov GY, Sverdlov ED Most recent AluY insertions in human gene introns reduce the content of the primary transcripts in a cell type specific manner GENE. 2007 APR 1; 390 (1-2): 122-129	4	4	12	28
2616	5814 Kass DH, Jamison N, Mayberry MM, Tecle E Identification of a unique Alu-based polymorphism and its use in human population studies GENE. 2007 APR 1; 390 (1-2): 146-152	0	1	10	27
2617	5815 Eller CD, Regelson M, Merriman B, Nelson S, Horvath S, et al. Repetitive sequence environment distinguishes housekeeping genes GENE. 2007 APR 1; 390 (1-2): 153-165	2	8	27	139
2618	5816 Zeilfelder U, Frank O, Sparacio S, Schon U, Bosch V, et al. The potential of retroviral vectors to cotransfer human endogenous retroviruses (HERVs) from human packaging cell lines GENE. 2007 APR 1; 390 (1-2): 175-179	0	4	4	21
2619	5817 Almeida LM, Silva IT, Silva WA, Castro JP, Riggs PK, et al. The contribution of transposable elements to Bos taurus gene structure GENE. 2007 APR 1; 390 (1-2): 180-189	1	7	26	80
2620	5818 Gasior SL, Preston G, Hedges DJ, Gilbert N, Moran JV, et al. Characterization of pre-insertion loci of de novo L1 insertions GENE. 2007 APR 1; 390 (1-2): 190-198	3	3	35	61
#	Date / Author / Journal	LCS	GCS	LCR	CR
2621	5819 Hulme AE, Bogerd HP, Cullen BR, Moran JV Selective inhibition of Alu retrotransposition by APOBEC3G GENE. 2007 APR 1; 390 (1-2): 199-205	11	38	15	52
2622	5820 Song MZ, Boissinot S Selection against LINE-1 retrotransposons results principally from their ability to mediate ectopic recombination GENE. 2007 APR 1; 390 (1-2): 206-213	11	12	20	45
2623	5821 Tamura M, Kajikawa M, Okada N Functional splice sites in a zebrafish LINE and their influence on zebrafish gene expression GENE. 2007 APR 1; 390 (1-2): 221-231	4	6	13	44
2624	5860 Sakai H, Tanaka T, Itoh T Birth and death of genes promoted by transposable elements in Oryza sativa GENE. 2007 MAY 1; 392 (1-2): 59-63	0	5	4	27
2625	5861 Oota H, Dunn CW, Speed WC, Pakstis AJ, Palmatier MA, et al. Conservative evolution in duplicated genes of the primate Class I ADH cluster GENE. 2007 MAY 1; 392 (1-2): 64-76	0	2	3	69
2626	5917 Haiminen N, Mannila H Discovering isochores by least-squares optimal segmentation GENE. 2007 JUN 1; 394 (1-2): 53-60	1	2	12	31
2627	5925 Honda H, Ichiyanagi K, Suzuki J, Ono T, Koyama H, et al. A new system for analyzing LINE retrotransposition in the chicken DT40 cell line widely used for reverse genetics GENE. 2007 JUN 15; 395 (1-2): 116-124	0	2	16	37
2628	5962 Gu W, Ray DA, Walker JA, Barnes EW, Gentles AJ, et al. SINEs, evolution and genome structure in the opossum GENE. 2007 JUL 1; 396 (1): 46-58	1	4	29	73
2629	5968 Lerat E, Semon M Influence of the transposable element neighborhood on human gene expression in normal and tumor tissues GENE. 2007 JUL 15; 396 (2): 303-311	0	2	15	55
2630	6096 Nishihara H, Kuno S, Nikaido M, Okada N MyrSINEs: A novel SINE family in the anteater genomes GENE. 2007 OCT 1; 400 (1-2): 98-103	0	3	9	38
#	Date / Author / Journal	LCS	GCS	LCR	CR
2631	6141 Drieschner N, Kerschling S, Soller JT, Rippe V, Belge G, et al. A domain of the thyroid adenoma associated gene (THADA) conserved in vertebrates becomes destroyed by chromosomal rearrangements observed in thyroid adenomas GENE. 2007 NOV 15; 403 (1-2): 110-117	0	3	2	33
2632	6173 Romanelli MG, Lorenzi P, Avesani F, Morandi C Functional characterization of the ribonucleoprotein, PTB-binding 1/Raverl promoter region GENE. 2007 DEC 15; 405 (1-2): 79-87	0	0	8	41
2633	6305 Munemasa M, Nikaido M, Nishihara H, Donnellan S, Austin CC, et al. Newly discovered young CORE-SINEs in marsupial genomes GENE. 2008 JAN 15; 407 (1-2): 176-185	2	3	7	33
2634	6315 Subirana JA, Messeguer X Structural families of genomic microsatellites GENE. 2008 JAN 31; 408 (1-2): 124-132	2	3	6	50
2635	6407 Belancio VP, Roy-Engel AM, Deininger P The impact of multiple splice sites in human L1 elements GENE. 2008 MAR 31; 411 (1-2): 38-45	6	6	19	49
2636	6408 Mugnier N, Gueguen L, Vieira C, Biemont C The heterochromatic copies of the LTR retrotransposons as a record of the genomic events that have shaped the Drosophila melanogaster genome GENE. 2008 MAR 31; 411 (1-2): 87-93	1	4	13	40
2637	6626 Wallace N, Wagstaff BJ, Deininger PL, Roy-Engel AM LINE-1 ORF1 protein enhances Alu SINE retrotransposition GENE. 2008 AUG 1; 419 (1-2): 1-6	3	4	20	53
2638	6627 Wallace NA, Belancio VP, Deininger PL L1 mobile element expression causes multiple types of toxicity GENE. 2008 AUG 1; 419 (1-2): 75-81	1	6	14	50
2639	6745 Huh JW, Ki DS, Ha HS, Lee JR, Kim YJ, et al. Cooperative exonization of MaLR and AluJo elements contributed an alternative promoter and novel splice variants of RNF19 GENE. 2008 NOV 15; 424 (1-2): 63-70	0	1	18	45
2640	6787 Gilbert C, Pace JK, Waters PD Target site analysis of RTE1_LA and its AfroSINE partner in the elephant genome GENE. 2008 DEC 1; 425 (1-2): 1-8	1	1	14	54
#	Date / Author / Journal	LCS	GCS	LCR	CR
2641	6799 Jin L, Kryukov K, Clemente JC, Komiyama T, Suzuki Y, et al. The evolutionary relationship between gene duplication and alternative splicing GENE. 2008 DEC 31; 427 (1-2): 19-31	1	1	4	25
2642	7021 Matveev V, Okada N Retroposons of salmonoid fishes (Actinopterygii: Salmonoidei) and their evolution GENE. 2009 APR 1; 434 (1-2): 16-28	0	0	11	71
2643	7029 Lee JR, Huh JW, Kim DS, Ha HS, Ahn K, et al. Lineage specific evolutionary events on SFTPB gene: Alu recombination-mediated deletion (ARMD), exonization, and alternative splicing events GENE. 2009 APR 15; 435 (1-2): 29-35	0	0	10	17
2644	7063 Huda A, Marino-Ramirez L, Landsman D, Jordan IK Repetitive DNA elements, nucleosome binding and human gene expression GENE. 2009 MAY 1; 436 (1-2): 12-22	0	0	20	55
2645	7064 Kass DH, Schaetz BA, Beitler L, Bonney KM, Jamison N, et al. Guinea pig ID-like families of SINEs GENE. 2009 MAY 1; 436 (1-2): 23-29	0	0	8	33
2646	7101 Meisel RP Repeat mediated gene duplication in the Drosophila pseudoobscura genome GENE. 2009 JUN 1; 438 (1-2): 1-7	0	2	5	47
2647	7146 Hirakawa M, Nishihara H, Kanehisa M, Okada N Characterization and evolutionary landscape of AmnSINE1 in Amniota genomes GENE. 2009 JUL 15; 441 (1-2): 100-110	0	0	25	61
2648	7147 Piskurek O, Nishihara H, Okada N The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis GENE. 2009 JUL 15; 441 (1-2): 111-118	1	1	26	86
2649	7186 Elias M, Archibald JM The RJL family of small GTPases is an ancient eukaryotic invention probably functionally associated with the flagellar apparatus GENE. 2009 AUG 1; 442 (1-2): 63-72	0	0	5	111
2650	7300 Sellis D, Almirantis Y Power-laws in the genomic distribution of coding segments in several organisms: An evolutionary trace of segmental duplications, possible paleopolyploidy and gene loss GENE. 2009 NOV 1; 447 (1): 18-28	0	0	10	55
#	Date / Author / Journal	LCS	GCS	LCR	CR
2651	7340 Cohen CJ, Lock WM, Mager DL Endogenous retroviral LTRs as promoters for human genes: A critical assessment GENE. 2009 DEC 15; 448 (2): 105-114	0	0	44	137
2652	7341 Hasnaoui M, Doucet AJ, Meziane O, Gilbert N Ancient repeat sequence derived from U6 snRNA in primate genomes GENE. 2009 DEC 15; 448 (2): 139-144	0	0	14	36
2653	7342 Li J, Han K, Xing JC, Kim HS, Rogers J, et al. Phylogeny of the macaques (Cercopithecidae: Macaca) based on Alu elements GENE. 2009 DEC 15; 448 (2): 242-249	0	1	9	61
2654	802 Singh R RNA-protein interactions that regulate pre-mRNA splicing GENE EXPRESSION. 2002; 10 (1-2): 79-92	0	19	2	138
2655	3041 Buckland PR, Coleman SL, Hoogendoorn B, Guy C, Smith SK, et al. A high proportion of chromosome 21 promoter polymorphisms influence transcriptional activity GENE EXPRESSION. 2004; 11 (5-6): 233-239	1	0	4	24
2656	5412 Tendeng C, Houart C Cloning and embryonic expression of five distinct sfrp genes in the zebrafish Danio rerio GENE EXPRESSION PATTERNS. 2006 OCT; 6 (8): 761-771	0	11	4	34
2657	5635 Yang F, Skaletsky H, Wang PJ Ubl4b, an X-derived retrogene, is specifically expressed in post-meiotic germ cells in mammals GENE EXPRESSION PATTERNS. 2007 JAN; 7 (1-2): 131-136	0	4	4	24
2658	6323 Khalfallah O, Faucon-Biguet N, Nardelli J, Meloni R, Mallet J Expression of the transcription factor Zfp191 during embryonic development in the mouse GENE EXPRESSION PATTERNS. 2008 FEB; 8 (3): 148-154	1	3	2	15
2659	978 Li B, Desai SA, MacCorkle-Chosnek RA, Fan L, Spencer DM A novel conditional Akt 'survival switch' reversibly protects cells from apoptosis GENE THERAPY. 2002 FEB; 9 (4): 233-244	0	24	1	76
2660	1344 Kuroiwa Y, Yoshida H, Ohshima T, Shinohara T, Ohguma A, et al. The use of chromosome-based vectors for animal transgenesis GENE THERAPY. 2002 JUN; 9 (11): 708-712	2	12	1	16
#	Date / Author / Journal	LCS	GCS	LCR	CR
2661	1810 Lemoine NR Risks and benefits of gene therapy for immunodeficiency: a reality check GENE THERAPY. 2002 DEC; 9 (23): 1561-1562	0	8	3	9
2662	2783 Wurtele H, Little KCE, Chartrand P Illegitimate DNA integration in mammalian cells GENE THERAPY. 2003 OCT; 10 (21): 1791-1799	0	23	2	108
2663	4370 Kakeda M, Hiratsuka M, Nagata K, Kuroiwa Y, Kakitani M, et al. Human artificial chromosome (HAC) vector provides long-term therapeutic transgene expression in normal human primary fibroblasts GENE THERAPY. 2005 MAY; 12 (10): 852-856	0	24	1	25
2664	4052 Loewen N, Poeschla EM Lentiviral vectors GENE THERAPY AND GENE DELIVERY SYSTEMS. 2005; 99: 169-191	2	17	7	183
2665	4401 Schioth HB, Fredriksson R The GRAFS classification system of G-protein coupled receptors in comparative perspective GENERAL AND COMPARATIVE ENDOCRINOLOGY. 2005 MAY 15; 142 (1-2): 94-101	3	23	4	43
2666	912 Bird A DNA methylation patterns and epigenetic memory GENES & DEVELOPMENT. 2002 JAN 1; 16 (1): 6-21	57	1224	4	202
2667	1498 Maquat LE NASty effects on fibrillin pre-mRNA splicing: another case of ESE does it, but proposals for translation-dependent splice site choice live on GENES & DEVELOPMENT. 2002 JUL 15; 16 (14): 1743-1753	3	36	2	44
2668	1860 Dovat S, Ronni T, Russell D, Ferrini R, Cobb BS, et al. A common mechanism for mitotic inactivation of C2H2 zinc finger DNA-binding domains GENES & DEVELOPMENT. 2002 DEC 1; 16 (23): 2985-2990	3	39	1	40
2669	2199 Faustino NA, Cooper TA Pre-mRNA splicing and human disease GENES & DEVELOPMENT. 2003 FEB 15; 17 (4): 419-437	43	432	9	183
2670	2200 Rinn JL, Euskirchen G, Bertone P, Martone R, Luscombe NM, et al. The transcriptional activity of human Chromosome 22 GENES & DEVELOPMENT. 2003 FEB 15; 17 (4): 529-540	39	125	6	27
#	Date / Author / Journal	LCS	GCS	LCR	CR
2671	2360 Lim LP, Lau NC, Weinstein EG, Abdelhakim A, Yekta S, et al. The microRNAs of Caenorhabditis elegans GENES & DEVELOPMENT. 2003 APR 15; 17 (8): 991-1008	10	403	2	72
2672	2746 Reynolds PA, Smolen GA, Palmer RE, Sgroi D, Yajnik V, et al. Identification of a DNA-binding site and transcriptional target for the EWS-WT1(+KTS) oncoprotein GENES & DEVELOPMENT. 2003 SEP 1; 17 (17): 2094-2107	0	19	3	54
2673	4288 Roh TY, Cuddapah S, Zhao K Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping GENES & DEVELOPMENT. 2005 MAR 1; 19 (5): 542-552	8	148	5	52
2674	4458 Tang M, Cecconi C, Kim H, Bustamante C, Rio DC Guanosine triphosphate acts as a cofactor to promote assembly of initial P-element transposase-DNA synaptic complexes GENES & DEVELOPMENT. 2005 JUN 15; 19 (12): 1422-1425	1	5	4	33
2675	4955 Alisch RS, Garcia-Perez JL, Muotri AR, Gage FH, Moran JV Unconventional translation of mammalian LINE-1 retrotransposons GENES & DEVELOPMENT. 2006 JAN 15; 20 (2): 210-224	7	16	11	55
2676	6390 Berretta J, Pinskaya M, Morillon A A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae GENES & DEVELOPMENT. 2008 MAR 1; 22 (5): 615-626	1	26	2	57
2677	6433 Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Totoki Y, Toyoda A, et al. DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes GENES & DEVELOPMENT. 2008 APR 1; 22 (7): 908-917	5	65	2	35
2678	6540 Combier JP, de Billy F, Gamas P, Niebel A, Rivas S Trans-regulation of the expression of the transcription factor MtHAP2-1 by a uORF controls root nodule development GENES & DEVELOPMENT. 2008 JUN 1; 22 (11): 1549-1559	0	7	4	51
2679	6665 Zhang CL, Zhang Z, Castle J, Sun SY, Johnson J, et al. Defining the regulatory network of the tissue-specific splicing factors Fox-1 and Fox-2 GENES & DEVELOPMENT. 2008 SEP 15; 22 (18): 2550-2563	1	21	8	60
2680	6971 Brady T, Lee YN, Ronen K, Malani N, Berry CC, et al. Integration target site selection by a resurrected human endogenous retrovirus GENES & DEVELOPMENT. 2009 MAR 1; 23 (5): 633-642	0	2	25	73
#	Date / Author / Journal	LCS	GCS	LCR	CR
2681	7102 Kano H, Godoy I, Courtney C, Vetter MR, Gerton GL, et al. L1 retrotransposition occurs mainly in embryogenesis and creates somatic mosaicism GENES & DEVELOPMENT. 2009 JUN 1; 23 (11): 1303-1312	2	4	14	33
2682	7353 Barsoum E, Martinez P, Astrom SU alpha 3, a transposable element that promotes host sexual reproduction GENES & DEVELOPMENT. 2010 JAN 1; 24 (1): 33-44	0	0	4	51
2683	3912 Kawahara Y, Matsuo T, Nozawa M, Shin-I T, Kohara Y, et al. Comparative sequence analysis of a gene-dense region among closely related species of Drosophila melanogaster GENES & GENETIC SYSTEMS. 2004 DEC; 79 (6): 351-359	0	4	7	31
2684	4737 Park ES, Huh JW, Kim TH, Kwak KD, Kim W, et al. Analysis of newly identified low copy AluYj subfamily GENES & GENETIC SYSTEMS. 2005 DEC; 80 (6): 415-422	1	3	12	37
2685	5413 Sin HS, Huh JW, Kim DS, Kim TH, Ha HS, et al. Endogenous retrovirus-related sequences provide an alternative transcript of MCJ genes in human tissues and cancer cells GENES & GENETIC SYSTEMS. 2006 OCT; 81 (5): 333-339	1	1	5	24
2686	5692 Yi JM, Kim HS Molecular phylogenetic analysis of the human endogenous retrovirus E (HERV-E) family in human tissues and human cancers GENES & GENETIC SYSTEMS. 2007 FEB; 82 (1): 89-98	0	1	9	47
2687	5784 Imai S, Sasaki T, Shimizu A, Asakawa S, Hori H, et al. The genome size evolution of medaka (Oryzias latipes) and fugu (Takifugu rubripes) GENES & GENETIC SYSTEMS. 2007 APR; 82 (2): 135-144	0	2	11	49
2688	3913 Nitto T, Dyer KD, Mejia RA, Bystrom J, Wynn TA, et al. Characterization of the divergent eosinophil ribonuclease, mEar 6, and its expression in response to Schistosoma mansoni infection in vivo GENES AND IMMUNITY. 2004 DEC; 5 (8): 668-674	0	3	2	24
2689	4259 Makrigiannis AP, Patel D, Goulet ML, Dewar K, Anderson SK Direct sequence comparison of two divergent class I MHC natural killer cell receptor haplotypes GENES AND IMMUNITY. 2005 MAR; 6 (2): 71-83	1	21	4	43
2690	4570 Anderson SK, Dewar K, Goulet ML, Leveque G, Makrigiannis AP Complete elucidation of a minimal class I MHC natural killer cell receptor haplotype GENES AND IMMUNITY. 2005 SEP; 6 (6): 481-492	0	21	4	43
#	Date / Author / Journal	LCS	GCS	LCR	CR
2691	6418 He H, Isnard A, Kouriba B, Cabantous S, Dessein A, et al. A STAT6 gene polymorphism is associated with high infection levels in urinary schistosomiasis GENES AND IMMUNITY. 2008 APR; 9 (3): 195-206	0	6	2	81
2692	5023 Kaput J, Astley S, Renkema M, Ordovas J, van Ommen B Harnessing Nutrigenomics: Development of web-based communication, databases, resources, and tools GENES AND NUTRITION. 2006 MAR; 1 (1): 5-11	0	6	5	20
2693	2634 Williams RW, Flaherty L, Threadgill DW The math of making mutant mice GENES BRAIN AND BEHAVIOR. 2003 AUG; 2 (4): 191-200	1	13	5	35
2694	550 Milech N, Kees UR, Watt PM Novel alternative PBX3 isoforms in leukemia cells with distinct interaction specificities GENES CHROMOSOMES & CANCER. 2001 NOV; 32 (3): 275-280	0	9	1	27
2695	1227 Clark J, Edwards S, John M, Flohr P, Gordon T, et al. Identification of amplified and expressed genes in breast cancer by comparative hybridization onto microarrays of randomly selected cDNA clones GENES CHROMOSOMES & CANCER. 2002 MAY; 34 (1): 104-114	1	52	2	32
2696	1345 Krummel KA, Denison SR, Calhoun E, Phillips LA, Smith DI The common fragile site FRA16D and its associated gene WWOX are highly conserved in the mouse at Fra8EI GENES CHROMOSOMES & CANCER. 2002 JUN; 34 (2): 154-167	0	37	3	51
2697	2306 Fiegler H, Carr P, Douglas EJ, Burford DC, Hunt S, et al. DNA microarrays for comparative genomic hybridization based on DOP-PCR amplification of BAC and PAC clones GENES CHROMOSOMES & CANCER. 2003 APR; 36 (4): 361-374	18	321	2	18
2698	4315 Kalnina Z, Zayakin P, Silina K, Line A Alterations of pre-mRNA splicing in cancer GENES CHROMOSOMES & CANCER. 2005 APR; 42 (4): 342-357	5	85	17	106
2699	4316 Jakob J, Nagase S, Gazdar A, Chien MC, Morozova I, et al. Two somatic biallelic lesions within and near SMAD4 in a human breast cancer cell line GENES CHROMOSOMES & CANCER. 2005 APR; 42 (4): 372-383	0	7	4	48
2700	4738 Davison EJ, Tarpey PS, Fiegler H, Tomlinson IPM, Carter NP Deletion at chromosome band 20p 12.1 in colorectal cancer revealed by high resolution array comparative genomic hybridization GENES CHROMOSOMES & CANCER. 2005 DEC; 44 (4): 384-391	0	7	2	28

Date / Author / Journal

LCS

GCS

LCR

2601

5476 Ichiyanagi K, Okada N

Genomic alterations upon integration of zebrafish L1 elements revealed by the TANT method

GENE. 2006 NOV 15; 383: 108-116

2602

5541 Melodelima C, Gueguen L, Piau D, Gautier C

A computational prediction of isochores based on hidden Markov models

GENE. 2006 DEC 30; 385: 41-49

2603

5542 Duret L, Eyre-Walker A, Galtier N

A new perspective on isochore evolution

GENE. 2006 DEC 30; 385: 71-74

2604

5679 Costa FF

Non-coding RNAs: Lost in translation?

GENE. 2007 JAN 15; 386 (1-2): 1-10

2605

5723 Takashima Y, Bando T, Kagawa H

A novel non-coding DNA family in Caenorhabditis elegans

GENE. 2007 FEB 15; 388 (1-2): 61-73

2606

5757 Smith CD, Edgar RC, Yandell MD, Smith DR, Celniker SE, et al.

Improved repeat identification and masking in Dipterans

GENE. 2007 MAR 1; 389 (1): 1-9

2607

5769 Sakai H, Koyanagi KO, Imanishi T, Itoh T, Gojobori T

Frequent emergence and functional resurrection of processed pseudogenes in the human and mouse genomes

GENE. 2007 MAR 15; 389 (2): 196-203

2608

5806 Pritham EJ, Putliwala T, Feschotte C

Mavericks, a novel class of giant transposable elements widespread in eukaryotes and related to DNA viruses

GENE. 2007 APR 1; 390 (1-2): 3-17

2609

5807 Lee J, Cordaux R, Han KD, Wang JX, Hedges DJ, et al.

Different evolutionary fates of recently integrated human and chimpanzee LINE-1 retrotransposons

GENE. 2007 APR 1; 390 (1-2): 18-27

2610

5808 Konkel MK, Wang JX, Liang P, Batzer MA

Identification and characterization of novel polymorphic LINE-1 insertions through comparison of two human genome sequence assemblies

GENE. 2007 APR 1; 390 (1-2): 28-38

Date / Author / Journal

LCS

GCS

LCR

2611

5809 Herke SW, Xing J, Ray DA, Zimmerman JW, Cordaux R, et al.

A SINE-based dichotomous key for primate identification

GENE. 2007 APR 1; 390 (1-2): 39-51

2612

5810 Fablet M, Rebollo R, Biemont C, Vieira C

The evolution of retrotransposon regulatory regions and its consequences on the Drosophila melanogaster and Homo sapiens host genomes

GENE. 2007 APR 1; 390 (1-2): 84-91

2613

5811 Belancio VP, Whelton M, Deininger P

Requirements for polyadenylation at the 3 ' end of LINE-1 elements

GENE. 2007 APR 1; 390 (1-2): 98-107

2614

5812 Zhi DG

Sequence correlation between neighboring Alu instances suggests post-retrotransposition sequence exchange due to Alu gene conversion

GENE. 2007 APR 1; 390 (1-2): 117-121

2615

5813 Lebedev YB, Amosova AL, Mamedov IZ, Fisunov GY, Sverdlov ED

Most recent AluY insertions in human gene introns reduce the content of the primary transcripts in a cell type specific manner

GENE. 2007 APR 1; 390 (1-2): 122-129

2616

5814 Kass DH, Jamison N, Mayberry MM, Tecle E

Identification of a unique Alu-based polymorphism and its use in human population studies

GENE. 2007 APR 1; 390 (1-2): 146-152

2617

5815 Eller CD, Regelson M, Merriman B, Nelson S, Horvath S, et al.

Repetitive sequence environment distinguishes housekeeping genes

GENE. 2007 APR 1; 390 (1-2): 153-165

139

2618

5816 Zeilfelder U, Frank O, Sparacio S, Schon U, Bosch V, et al.

The potential of retroviral vectors to cotransfer human endogenous retroviruses (HERVs) from human packaging cell lines

GENE. 2007 APR 1; 390 (1-2): 175-179

2619

5817 Almeida LM, Silva IT, Silva WA, Castro JP, Riggs PK, et al.

The contribution of transposable elements to Bos taurus gene structure

GENE. 2007 APR 1; 390 (1-2): 180-189

2620

5818 Gasior SL, Preston G, Hedges DJ, Gilbert N, Moran JV, et al.

Characterization of pre-insertion loci of de novo L1 insertions

GENE. 2007 APR 1; 390 (1-2): 190-198

Date / Author / Journal

LCS

GCS

LCR

2621

5819 Hulme AE, Bogerd HP, Cullen BR, Moran JV

Selective inhibition of Alu retrotransposition by APOBEC3G

GENE. 2007 APR 1; 390 (1-2): 199-205

2622

5820 Song MZ, Boissinot S

Selection against LINE-1 retrotransposons results principally from their ability to mediate ectopic recombination

GENE. 2007 APR 1; 390 (1-2): 206-213

2623

5821 Tamura M, Kajikawa M, Okada N

Functional splice sites in a zebrafish LINE and their influence on zebrafish gene expression

GENE. 2007 APR 1; 390 (1-2): 221-231

2624

5860 Sakai H, Tanaka T, Itoh T

Birth and death of genes promoted by transposable elements in Oryza sativa

GENE. 2007 MAY 1; 392 (1-2): 59-63

2625

5861 Oota H, Dunn CW, Speed WC, Pakstis AJ, Palmatier MA, et al.

Conservative evolution in duplicated genes of the primate Class I ADH cluster

GENE. 2007 MAY 1; 392 (1-2): 64-76

2626

5917 Haiminen N, Mannila H

Discovering isochores by least-squares optimal segmentation

GENE. 2007 JUN 1; 394 (1-2): 53-60

2627

5925 Honda H, Ichiyanagi K, Suzuki J, Ono T, Koyama H, et al.

A new system for analyzing LINE retrotransposition in the chicken DT40 cell line widely used for reverse genetics

GENE. 2007 JUN 15; 395 (1-2): 116-124

2628

5962 Gu W, Ray DA, Walker JA, Barnes EW, Gentles AJ, et al.

SINEs, evolution and genome structure in the opossum

GENE. 2007 JUL 1; 396 (1): 46-58

2629

5968 Lerat E, Semon M

Influence of the transposable element neighborhood on human gene expression in normal and tumor tissues

GENE. 2007 JUL 15; 396 (2): 303-311

2630

6096 Nishihara H, Kuno S, Nikaido M, Okada N

MyrSINEs: A novel SINE family in the anteater genomes

GENE. 2007 OCT 1; 400 (1-2): 98-103

Date / Author / Journal

LCS

GCS

LCR

2631

6141 Drieschner N, Kerschling S, Soller JT, Rippe V, Belge G, et al.

A domain of the thyroid adenoma associated gene (THADA) conserved in vertebrates becomes destroyed by chromosomal rearrangements observed in thyroid adenomas

GENE. 2007 NOV 15; 403 (1-2): 110-117

2632

6173 Romanelli MG, Lorenzi P, Avesani F, Morandi C

Functional characterization of the ribonucleoprotein, PTB-binding 1/Raverl promoter region

GENE. 2007 DEC 15; 405 (1-2): 79-87

2633

6305 Munemasa M, Nikaido M, Nishihara H, Donnellan S, Austin CC, et al.

Newly discovered young CORE-SINEs in marsupial genomes

GENE. 2008 JAN 15; 407 (1-2): 176-185

2634

6315 Subirana JA, Messeguer X

Structural families of genomic microsatellites

GENE. 2008 JAN 31; 408 (1-2): 124-132

2635

6407 Belancio VP, Roy-Engel AM, Deininger P

The impact of multiple splice sites in human L1 elements

GENE. 2008 MAR 31; 411 (1-2): 38-45

2636

6408 Mugnier N, Gueguen L, Vieira C, Biemont C

The heterochromatic copies of the LTR retrotransposons as a record of the genomic events that have shaped the Drosophila melanogaster genome

GENE. 2008 MAR 31; 411 (1-2): 87-93

2637

6626 Wallace N, Wagstaff BJ, Deininger PL, Roy-Engel AM

LINE-1 ORF1 protein enhances Alu SINE retrotransposition

GENE. 2008 AUG 1; 419 (1-2): 1-6

2638

6627 Wallace NA, Belancio VP, Deininger PL

L1 mobile element expression causes multiple types of toxicity

GENE. 2008 AUG 1; 419 (1-2): 75-81

2639

6745 Huh JW, Ki DS, Ha HS, Lee JR, Kim YJ, et al.

Cooperative exonization of MaLR and AluJo elements contributed an alternative promoter and novel splice variants of RNF19

GENE. 2008 NOV 15; 424 (1-2): 63-70

2640

6787 Gilbert C, Pace JK, Waters PD

Target site analysis of RTE1_LA and its AfroSINE partner in the elephant genome

GENE. 2008 DEC 1; 425 (1-2): 1-8

Date / Author / Journal

LCS

GCS

LCR

2641

6799 Jin L, Kryukov K, Clemente JC, Komiyama T, Suzuki Y, et al.

The evolutionary relationship between gene duplication and alternative splicing

GENE. 2008 DEC 31; 427 (1-2): 19-31

2642

7021 Matveev V, Okada N

Retroposons of salmonoid fishes (Actinopterygii: Salmonoidei) and their evolution

GENE. 2009 APR 1; 434 (1-2): 16-28

2643

7029 Lee JR, Huh JW, Kim DS, Ha HS, Ahn K, et al.

Lineage specific evolutionary events on SFTPB gene: Alu recombination-mediated deletion (ARMD), exonization, and alternative splicing events

GENE. 2009 APR 15; 435 (1-2): 29-35

2644

7063 Huda A, Marino-Ramirez L, Landsman D, Jordan IK

Repetitive DNA elements, nucleosome binding and human gene expression

GENE. 2009 MAY 1; 436 (1-2): 12-22

2645

7064 Kass DH, Schaetz BA, Beitler L, Bonney KM, Jamison N, et al.

Guinea pig ID-like families of SINEs

GENE. 2009 MAY 1; 436 (1-2): 23-29

2646

7101 Meisel RP

Repeat mediated gene duplication in the Drosophila pseudoobscura genome

GENE. 2009 JUN 1; 438 (1-2): 1-7

2647

7146 Hirakawa M, Nishihara H, Kanehisa M, Okada N

Characterization and evolutionary landscape of AmnSINE1 in Amniota genomes

GENE. 2009 JUL 15; 441 (1-2): 100-110

2648

7147 Piskurek O, Nishihara H, Okada N

The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis

GENE. 2009 JUL 15; 441 (1-2): 111-118

2649

7186 Elias M, Archibald JM

The RJL family of small GTPases is an ancient eukaryotic invention probably functionally associated with the flagellar apparatus

GENE. 2009 AUG 1; 442 (1-2): 63-72

111

2650

7300 Sellis D, Almirantis Y

Power-laws in the genomic distribution of coding segments in several organisms: An evolutionary trace of segmental duplications, possible paleopolyploidy and gene loss

GENE. 2009 NOV 1; 447 (1): 18-28

Date / Author / Journal

LCS

GCS

LCR

2651

7340 Cohen CJ, Lock WM, Mager DL

Endogenous retroviral LTRs as promoters for human genes: A critical assessment

GENE. 2009 DEC 15; 448 (2): 105-114

137

2652

7341 Hasnaoui M, Doucet AJ, Meziane O, Gilbert N

Ancient repeat sequence derived from U6 snRNA in primate genomes

GENE. 2009 DEC 15; 448 (2): 139-144

2653

7342 Li J, Han K, Xing JC, Kim HS, Rogers J, et al.

Phylogeny of the macaques (Cercopithecidae: Macaca) based on Alu elements

GENE. 2009 DEC 15; 448 (2): 242-249

2654

802 Singh R

RNA-protein interactions that regulate pre-mRNA splicing

GENE EXPRESSION. 2002; 10 (1-2): 79-92

138

2655

3041 Buckland PR, Coleman SL, Hoogendoorn B, Guy C, Smith SK, et al.

A high proportion of chromosome 21 promoter polymorphisms influence transcriptional activity

GENE EXPRESSION. 2004; 11 (5-6): 233-239

2656

5412 Tendeng C, Houart C

Cloning and embryonic expression of five distinct sfrp genes in the zebrafish Danio rerio

GENE EXPRESSION PATTERNS. 2006 OCT; 6 (8): 761-771

2657

5635 Yang F, Skaletsky H, Wang PJ

Ubl4b, an X-derived retrogene, is specifically expressed in post-meiotic germ cells in mammals

GENE EXPRESSION PATTERNS. 2007 JAN; 7 (1-2): 131-136

2658

6323 Khalfallah O, Faucon-Biguet N, Nardelli J, Meloni R, Mallet J

Expression of the transcription factor Zfp191 during embryonic development in the mouse

GENE EXPRESSION PATTERNS. 2008 FEB; 8 (3): 148-154

2659

978 Li B, Desai SA, MacCorkle-Chosnek RA, Fan L, Spencer DM

A novel conditional Akt 'survival switch' reversibly protects cells from apoptosis

GENE THERAPY. 2002 FEB; 9 (4): 233-244

2660

1344 Kuroiwa Y, Yoshida H, Ohshima T, Shinohara T, Ohguma A, et al.

The use of chromosome-based vectors for animal transgenesis

GENE THERAPY. 2002 JUN; 9 (11): 708-712

Date / Author / Journal

2661

Risks and benefits of gene therapy for immunodeficiency: a reality check

GENE THERAPY. 2002 DEC; 9 (23): 1561-1562

2662

2783 Wurtele H, Little KCE, Chartrand P

Illegitimate DNA integration in mammalian cells

GENE THERAPY. 2003 OCT; 10 (21): 1791-1799

108

2663

4370 Kakeda M, Hiratsuka M, Nagata K, Kuroiwa Y, Kakitani M, et al.

Human artificial chromosome (HAC) vector provides long-term therapeutic transgene expression in normal human primary fibroblasts

GENE THERAPY. 2005 MAY; 12 (10): 852-856

2664

4052 Loewen N, Poeschla EM

Lentiviral vectors

GENE THERAPY AND GENE DELIVERY SYSTEMS. 2005; 99: 169-191

183

2665

4401 Schioth HB, Fredriksson R

The GRAFS classification system of G-protein coupled receptors in comparative perspective

GENERAL AND COMPARATIVE ENDOCRINOLOGY. 2005 MAY 15; 142 (1-2): 94-101

2666

912 Bird A

DNA methylation patterns and epigenetic memory

GENES & DEVELOPMENT. 2002 JAN 1; 16 (1): 6-21

1224

202

2667

1498 Maquat LE

NASty effects on fibrillin pre-mRNA splicing: another case of ESE does it, but proposals for translation-dependent splice site choice live on

GENES & DEVELOPMENT. 2002 JUL 15; 16 (14): 1743-1753

2668

1860 Dovat S, Ronni T, Russell D, Ferrini R, Cobb BS, et al.

A common mechanism for mitotic inactivation of C2H2 zinc finger DNA-binding domains

GENES & DEVELOPMENT. 2002 DEC 1; 16 (23): 2985-2990

2669

2199 Faustino NA, Cooper TA

Pre-mRNA splicing and human disease

GENES & DEVELOPMENT. 2003 FEB 15; 17 (4): 419-437

432

183

2670

2200 Rinn JL, Euskirchen G, Bertone P, Martone R, Luscombe NM, et al.

The transcriptional activity of human Chromosome 22

GENES & DEVELOPMENT. 2003 FEB 15; 17 (4): 529-540

125

Date / Author / Journal

LCS

GCS

LCR

2671

2360 Lim LP, Lau NC, Weinstein EG, Abdelhakim A, Yekta S, et al.

The microRNAs of Caenorhabditis elegans

GENES & DEVELOPMENT. 2003 APR 15; 17 (8): 991-1008

403

2672

2746 Reynolds PA, Smolen GA, Palmer RE, Sgroi D, Yajnik V, et al.

Identification of a DNA-binding site and transcriptional target for the EWS-WT1(+KTS) oncoprotein

GENES & DEVELOPMENT. 2003 SEP 1; 17 (17): 2094-2107

2673

4288 Roh TY, Cuddapah S, Zhao K

Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping

GENES & DEVELOPMENT. 2005 MAR 1; 19 (5): 542-552

148

2674

4458 Tang M, Cecconi C, Kim H, Bustamante C, Rio DC

Guanosine triphosphate acts as a cofactor to promote assembly of initial P-element transposase-DNA synaptic complexes

GENES & DEVELOPMENT. 2005 JUN 15; 19 (12): 1422-1425

2675

4955 Alisch RS, Garcia-Perez JL, Muotri AR, Gage FH, Moran JV

Unconventional translation of mammalian LINE-1 retrotransposons

GENES & DEVELOPMENT. 2006 JAN 15; 20 (2): 210-224

2676

6390 Berretta J, Pinskaya M, Morillon A

A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae

GENES & DEVELOPMENT. 2008 MAR 1; 22 (5): 615-626

2677

6433 Kuramochi-Miyagawa S, Watanabe T, Gotoh K, Totoki Y, Toyoda A, et al.

DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes

GENES & DEVELOPMENT. 2008 APR 1; 22 (7): 908-917

2678

6540 Combier JP, de Billy F, Gamas P, Niebel A, Rivas S

Trans-regulation of the expression of the transcription factor MtHAP2-1 by a uORF controls root nodule development

GENES & DEVELOPMENT. 2008 JUN 1; 22 (11): 1549-1559

2679

6665 Zhang CL, Zhang Z, Castle J, Sun SY, Johnson J, et al.

Defining the regulatory network of the tissue-specific splicing factors Fox-1 and Fox-2

GENES & DEVELOPMENT. 2008 SEP 15; 22 (18): 2550-2563

2680

6971 Brady T, Lee YN, Ronen K, Malani N, Berry CC, et al.

Integration target site selection by a resurrected human endogenous retrovirus

GENES & DEVELOPMENT. 2009 MAR 1; 23 (5): 633-642

Date / Author / Journal

LCS

GCS

LCR

2681

7102 Kano H, Godoy I, Courtney C, Vetter MR, Gerton GL, et al.

L1 retrotransposition occurs mainly in embryogenesis and creates somatic mosaicism

GENES & DEVELOPMENT. 2009 JUN 1; 23 (11): 1303-1312

2682

7353 Barsoum E, Martinez P, Astrom SU

alpha 3, a transposable element that promotes host sexual reproduction

GENES & DEVELOPMENT. 2010 JAN 1; 24 (1): 33-44

2683

3912 Kawahara Y, Matsuo T, Nozawa M, Shin-I T, Kohara Y, et al.

Comparative sequence analysis of a gene-dense region among closely related species of Drosophila melanogaster

GENES & GENETIC SYSTEMS. 2004 DEC; 79 (6): 351-359

2684

4737 Park ES, Huh JW, Kim TH, Kwak KD, Kim W, et al.

Analysis of newly identified low copy AluYj subfamily

GENES & GENETIC SYSTEMS. 2005 DEC; 80 (6): 415-422

2685

5413 Sin HS, Huh JW, Kim DS, Kim TH, Ha HS, et al.

Endogenous retrovirus-related sequences provide an alternative transcript of MCJ genes in human tissues and cancer cells

GENES & GENETIC SYSTEMS. 2006 OCT; 81 (5): 333-339

2686

5692 Yi JM, Kim HS

Molecular phylogenetic analysis of the human endogenous retrovirus E (HERV-E) family in human tissues and human cancers

GENES & GENETIC SYSTEMS. 2007 FEB; 82 (1): 89-98

2687

5784 Imai S, Sasaki T, Shimizu A, Asakawa S, Hori H, et al.

The genome size evolution of medaka (Oryzias latipes) and fugu (Takifugu rubripes)

GENES & GENETIC SYSTEMS. 2007 APR; 82 (2): 135-144

2688

3913 Nitto T, Dyer KD, Mejia RA, Bystrom J, Wynn TA, et al.

Characterization of the divergent eosinophil ribonuclease, mEar 6, and its expression in response to Schistosoma mansoni infection in vivo

GENES AND IMMUNITY. 2004 DEC; 5 (8): 668-674

2689

4259 Makrigiannis AP, Patel D, Goulet ML, Dewar K, Anderson SK

Direct sequence comparison of two divergent class I MHC natural killer cell receptor haplotypes

GENES AND IMMUNITY. 2005 MAR; 6 (2): 71-83

2690

4570 Anderson SK, Dewar K, Goulet ML, Leveque G, Makrigiannis AP

Complete elucidation of a minimal class I MHC natural killer cell receptor haplotype

GENES AND IMMUNITY. 2005 SEP; 6 (6): 481-492

Date / Author / Journal

LCS

GCS

LCR

2691

6418 He H, Isnard A, Kouriba B, Cabantous S, Dessein A, et al.

A STAT6 gene polymorphism is associated with high infection levels in urinary schistosomiasis

GENES AND IMMUNITY. 2008 APR; 9 (3): 195-206

2692

5023 Kaput J, Astley S, Renkema M, Ordovas J, van Ommen B

Harnessing Nutrigenomics: Development of web-based communication, databases, resources, and tools

GENES AND NUTRITION. 2006 MAR; 1 (1): 5-11

2693

2634 Williams RW, Flaherty L, Threadgill DW

The math of making mutant mice

GENES BRAIN AND BEHAVIOR. 2003 AUG; 2 (4): 191-200

2694

550 Milech N, Kees UR, Watt PM

Novel alternative PBX3 isoforms in leukemia cells with distinct interaction specificities

GENES CHROMOSOMES & CANCER. 2001 NOV; 32 (3): 275-280

2695

1227 Clark J, Edwards S, John M, Flohr P, Gordon T, et al.

Identification of amplified and expressed genes in breast cancer by comparative hybridization onto microarrays of randomly selected cDNA clones

GENES CHROMOSOMES & CANCER. 2002 MAY; 34 (1): 104-114

2696

1345 Krummel KA, Denison SR, Calhoun E, Phillips LA, Smith DI

The common fragile site FRA16D and its associated gene WWOX are highly conserved in the mouse at Fra8EI

GENES CHROMOSOMES & CANCER. 2002 JUN; 34 (2): 154-167

2697

2306 Fiegler H, Carr P, Douglas EJ, Burford DC, Hunt S, et al.

DNA microarrays for comparative genomic hybridization based on DOP-PCR amplification of BAC and PAC clones

GENES CHROMOSOMES & CANCER. 2003 APR; 36 (4): 361-374

321

2698

4315 Kalnina Z, Zayakin P, Silina K, Line A

Alterations of pre-mRNA splicing in cancer

GENES CHROMOSOMES & CANCER. 2005 APR; 42 (4): 342-357

106

2699

4316 Jakob J, Nagase S, Gazdar A, Chien MC, Morozova I, et al.

Two somatic biallelic lesions within and near SMAD4 in a human breast cancer cell line

GENES CHROMOSOMES & CANCER. 2005 APR; 42 (4): 372-383

2700

4738 Davison EJ, Tarpey PS, Fiegler H, Tomlinson IPM, Carter NP

Deletion at chromosome band 20p 12.1 in colorectal cancer revealed by high resolution array comparative genomic hybridization

GENES CHROMOSOMES & CANCER. 2005 DEC; 44 (4): 384-391

Initial sequencing and analysis of the human genome (Lander) The papers citing Lander ES, et al. "Initial sequencing and analysis of the human genome." NATURE. 2001 FEB 15; 409 (6822): 860-921	Historiographs	Glossary HistCite Guide About Grand Totals: LCS 38623, GCS 253809, CR 422506 Collection span: 2000 - 2010
List of All Records