HistCite - Initial sequencing and analysis of the human genome (Lander)

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#	Date / Author / Journal	LCS	GCS	LCR	CR
1701	4237 Chen TM, Lu CC, Li WH Prediction of splice sites with dependency graphs and their expanded bayesian networks BIOINFORMATICS. 2005 FEB 15; 21 (4): 471-482	3	22	2	22
1702	4274 Karaoglu H, Lee CMY, Meyer W Survey of simple sequence repeats in completed fungal genomes MOLECULAR BIOLOGY AND EVOLUTION. 2005 MAR; 22 (3): 639-649	3	39	6	61
1703	4293 Campos JL, Urpi L, Sanmartin T, Gouyette C, Subirana JA DNA coiled coils PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005 MAR 8; 102 (10): 3663-3666	3	6	1	29
1704	4302 Zhou Y, Mishra B Quantifying the mechanisms for segmental duplications in mammalian genomes by statistical analysis and modeling PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005 MAR 15; 102 (11): 4051-4056	3	15	18	33
1705	4327 Alamgir ASM, Owens N, Lavignon M, Malik F, Evans LH Precise identification of endogenous proviruses of NFS/N mice participating in recombination with Moloney ecotropic murine leukemia virus (MuLV) to generate polytropic MuLVs JOURNAL OF VIROLOGY. 2005 APR; 79 (8): 4664-4671	3	5	5	71
1706	4343 Cohen-Gihon I, Lancet D, Yanai I Modular genes with metazoan-specific domains have increased tissue specificity TRENDS IN GENETICS. 2005 APR; 21 (4): 210-213	3	11	9	19
1707	4347 Alfano G, Vitiello C, Caccioppoli C, Caramico T, Carola A, et al. Natural antisense transcripts associated with genes involved in eye development HUMAN MOLECULAR GENETICS. 2005 APR 1; 14 (7): 913-923	3	33	6	39
1708	4360 Ruparel H, Bi LR, Li ZM, Bai XP, Kim DH, et al. Design and synthesis of a 3 '-O-allyl photocleavable fluorescent nucleotide as a reversible terminator for DNA sequencing by synthesis PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005 APR 26; 102 (17): 5932-5937	3	24	3	32
1709	4389 Christensen T Association of human endogenous retroviruses with multiple sclerosis and possible interactions with herpes viruses REVIEWS IN MEDICAL VIROLOGY. 2005 MAY-JUN; 15 (3): 179-211	3	35	10	276
1710	4401 Schioth HB, Fredriksson R The GRAFS classification system of G-protein coupled receptors in comparative perspective GENERAL AND COMPARATIVE ENDOCRINOLOGY. 2005 MAY 15; 142 (1-2): 94-101	3	23	4	43
#	Date / Author / Journal	LCS	GCS	LCR	CR
1711	4423 Le Rouzic A, Deceliere G Models of the population genetics of transposable elements GENETICS RESEARCH. 2005 JUN; 85 (3): 171-181	3	14	6	116
1712	4425 Zhang XHF, Leslie CS, Chasin LA Dichotomous splicing signals in exon flanks GENOME RESEARCH. 2005 JUN; 15 (6): 768-779	3	24	10	76
1713	4430 Oja M, Sperber GO, Blomberg J, Kaski S Self-organizing map-based discovery and visualization of human endogenous retroviral sequence groups INTERNATIONAL JOURNAL OF NEURAL SYSTEMS. 2005 JUN; 15 (3): 163-179	3	8	2	41
1714	4447 Kol G, Lev-Maor G, Ast G Human-mouse comparative analysis reveals that branch-site plasticity contributes to splicing regulation HUMAN MOLECULAR GENETICS. 2005 JUN 1; 14 (11): 1559-1568	3	36	9	37
1715	4461 Murray CG, Larsson TP, Hill T, Bjorklind R, Fredriksson R, et al. Evaluation of EST-data using the genome assembly BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2005 JUN 17; 331 (4): 1566-1576	3	7	6	28
1716	4470 Pozzoli U, Sironi M Silencers regulate both constitutive and alternative splicing events in mammals CELLULAR AND MOLECULAR LIFE SCIENCES. 2005 JUL; 62 (14): 1579-1604	3	28	15	184
1717	4483 Horvath JE, Gulden CL, Vallente RU, Eichler MY, Ventura M, et al. Punctuated duplication seeding events during the evolution of human chromosome 2p11 GENOME RESEARCH. 2005 JUL; 15 (7): 914-927	3	19	20	56
1718	4486 Lippert RA, Zhao XY, Florea L, Mobarry C, Istrail S Finding anchors for genomic sequence comparison JOURNAL OF COMPUTATIONAL BIOLOGY. 2005 JUL; 12 (6): 762-776	3	3	5	20
1719	4487 Claverie-Martin F, Flores C, Anton-Gamero M, Gonzalez-Acosta H, Garcia-Nieto V The Alu insertion in the CLCN5 gene of a patient with Dent's disease leads to exon 11 skipping JOURNAL OF HUMAN GENETICS. 2005 JUL; 50 (7): 370-374	3	10	6	27
1720	4525 Vavouri T, Elgar G Prediction of cis-regulatory elements using binding site matrices - the successes, the failures and the reasons for both CURRENT OPINION IN GENETICS & DEVELOPMENT. 2005 AUG; 15 (4): 395-402	3	33	8	74
#	Date / Author / Journal	LCS	GCS	LCR	CR
1721	4541 Efferth T, Volm M Pharmacogenetics for individualized cancer chemotherapy PHARMACOLOGY & THERAPEUTICS. 2005 AUG; 107 (2): 155-176	3	62	6	289
1722	4553 Babak T, Blencowe BJ, Hughes TR A systematic search for new mammalian noncoding RNAs indicates little conserved intergenic transcription BMC GENOMICS. 2005 AUG 5; 6: Art. No. 104	3	20	12	43
1723	4568 Levanon K, Eisenberg E, Rechavi G, Levanon EY Letter from the editor: Adenosine-to-inosine RNA editing in Alu repeats in the human genome EMBO REPORTS. 2005 SEP; 6 (9): 831-835	3	19	8	48
1724	4586 Sicat J, Sutkowski N, Huber BT Expression of human endogenous retrovirus HERV-K18 superantigen is elevated in juvenile rheumatoid arthritis JOURNAL OF RHEUMATOLOGY. 2005 SEP; 32 (9): 1821-1831	3	8	4	59
1725	4588 Miller DG, Trobridge GD, Petek LM, Jacobs MA, Kaul R, et al. Large-scale analysis of adeno-associated virus vector integration sites in normal human cells JOURNAL OF VIROLOGY. 2005 SEP; 79 (17): 11434-11442	3	40	7	48
1726	4611 Holland PWH, Takahashi T The evolution of homeobox genes: Implications for the study of brain development BRAIN RESEARCH BULLETIN. 2005 SEP 15; 66 (4-6): 484-490	3	21	4	26
1727	4633 Schmegner C, Berger A, Vogel W, Hameister H, Assum G An isochore transition zone in the NF1 gene region is a conserved landmark of chromosome structure and function GENOMICS. 2005 OCT; 86 (4): 439-445	3	7	4	36
1728	4642 Youngson NA, Kocialkowski S, Peel N, Ferguson-Smith AC A small family of sushi-class retrotransposon-derived genes in mammals and their relation to genomic imprinting JOURNAL OF MOLECULAR EVOLUTION. 2005 OCT; 61 (4): 481-490	3	30	2	41
1729	4649 Cowan RK, Hoen DR, Schoen DJ, Bureau TE MUSTANG is a novel family of domesticated transposase genes found in diverse angiosperms MOLECULAR BIOLOGY AND EVOLUTION. 2005 OCT; 22 (10): 2084-2089	3	12	6	33
1730	4668 Pritsker M, Doniger TT, Kramer LC, Westcot SE, Lemischka IR Diversification of stem cell molecular repertoire by alternative splicing PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005 OCT 4; 102 (40): 14290-14295	3	23	10	38
#	Date / Author / Journal	LCS	GCS	LCR	CR
1731	4669 Bonizzoni P, Rizzi R, Pesole G ASPIC: a novel method to predict the exon-intron structure of a gene that is optimally compatible to a set of transcript sequences BMC BIOINFORMATICS. 2005 OCT 5; 6: Art. No. 244	3	10	12	31
1732	4688 Lazaridis KN, Juran BD American gastroenterological association future trends committee report: The application of genomic and proteomic technologies to digestive disease diagnosis and treatment and their likely impact on gastroenterology clinical practice GASTROENTEROLOGY. 2005 NOV; 129 (5): 1720-1752	3	6	8	112
1733	4696 Maksakova IA, Mager DL Transcriptional regulation of early transposon elements, an active family of mouse long terminal repeat retrotransposons JOURNAL OF VIROLOGY. 2005 NOV; 79 (22): 13865-13874	3	15	4	58
1734	4714 Blumenstiel JP, Hartl DL Evidence for maternally transmitted small interfering RNA in the repression of transposition in Drosophila virilis PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005 NOV 1; 102 (44): 15965-15970	3	32	2	47
1735	4722 El-Sawy M, Kale SP, Dugan C, Nguyen TQ, Belancio V, et al. Nickel stimulates L1 retrotransposition by a post-transcriptional mechanism JOURNAL OF MOLECULAR BIOLOGY. 2005 NOV 25; 354 (2): 246-257	3	9	13	71
1736	4742 Varki A, Altheide TK Comparing the human and chimpanzee genomes: Searching for needles in a haystack GENOME RESEARCH. 2005 DEC; 15 (12): 1746-1758	3	46	20	133
1737	4794 Bhattacharyya RP, Remenyi A, Yeh BJ, Lim WA Domains, motifs, and scaffolds: The role of modular interactions in the evolution and wiring of cell signaling circuits ANNUAL REVIEW OF BIOCHEMISTRY. 2006; 75: 655-680	3	83	7	157
1738	4797 Schueler MG, Sullivan BA Structural and functional dynamics of human centromeric chromatin ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS. 2006; 7: 301-313	3	23	10	80
1739	4840 Stoye JP Koala retrovirus: a genome invasion in real time GENOME BIOLOGY. 2006; 7 (11): Art. No. 241	3	7	4	16
1740	4874 Farkash EA, Kao GD, Horman SR, Prak ETL Gamma radiation increases endonuclease-dependent L1 retrotransposition in a cultured cell assay NUCLEIC ACIDS RESEARCH. 2006; 34 (4): 1196-1204	3	10	16	46
#	Date / Author / Journal	LCS	GCS	LCR	CR
1741	4925 Andreini C, Banci L, Bertini I, Rosato A Counting the zinc-proteins encoded in the human genome JOURNAL OF PROTEOME RESEARCH. 2006 JAN; 5 (1): 196-201	3	73	3	39
1742	4937 Schattner P, Barberan-Soler S, Lowe TM A computational screen for mammalian pseudouridylation guide H/ACA RNAs RNA-A PUBLICATION OF THE RNA SOCIETY. 2006 JAN; 12 (1): 15-25	3	26	4	34
1743	4964 Cordaux R, Batzer MA Teaching an old dog new tricks: SINEs of canine genomic diversity PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2006 JAN 31; 103 (5): 1157-1158	3	6	19	30
1744	4984 Lipatov M, Arndt PF, Hwa T, Petrov DA A novel method distinguishes between mutation rates and fixation biases in patterns of single-nucleotide substitution JOURNAL OF MOLECULAR EVOLUTION. 2006 FEB; 62 (2): 168-175	3	7	9	16
1745	5024 Volik S, Raphael BJ, Huang GQ, Stratton MR, Bignel G, et al. Decoding the fine-scale structure of a breast cancer genome and transcriptome GENOME RESEARCH. 2006 MAR; 16 (3): 394-404	3	21	10	63
1746	5036 Semon M, Lobry JR, Duret L No evidence for tissue-specific adaptation of synonymous codon usage in humans MOLECULAR BIOLOGY AND EVOLUTION. 2006 MAR; 23 (3): 523-529	3	13	12	38
1747	5051 Stribinskis V, Ramos KS Activation of human long interspersed nuclear element 1 retrotransposition by benzo(a)pyrene, an ubiquitous environmental carcinogen CANCER RESEARCH. 2006 MAR 1; 66 (5): 2616-2620	3	9	8	58
1748	5058 Azubel M, Habib N, Sperling R, Sperling J Native spliceosomes assemble with Pre-mRNA to form supraspliceosomes JOURNAL OF MOLECULAR BIOLOGY. 2006 MAR 3; 356 (4): 955-966	3	12	7	42
1749	5064 Chen FC, Chen CJ, Ho JY, Chuang TJ Identification and evolutionary analysis of novel exons and alternative splicing events using cross-species EST-to-genome comparisons in human, mouse and rat BMC BIOINFORMATICS. 2006 MAR 15; 7: Art. No. 136	3	16	21	49
1750	5068 Chalberg TW, Portlock JL, Olivares EC, Thyagarajan B, Kirby PJ, et al. Integration specificity of phage phi C31 integrase in the human genome JOURNAL OF MOLECULAR BIOLOGY. 2006 MAR 17; 357 (1): 28-48	3	51	9	55
#	Date / Author / Journal	LCS	GCS	LCR	CR
1751	5071 Taylor TD, Noguchi H, Totoki Y, Toyoda A, Kuroki Y, et al. Human chromosome 11 DNA sequence and analysis including novel gene identification NATURE. 2006 MAR 23; 440 (7083): 497-500	3	12	12	28
1752	5082 Pe'er I, Chretien YR, de Bakker PIW, Barrett JC, Daly MJ, et al. Biases and reconciliation in estimates of linkage disequilibrium in the human genome AMERICAN JOURNAL OF HUMAN GENETICS. 2006 APR; 78 (4): 588-603	3	21	7	43
1753	5233 Buscher K, Hahn S, Hofmann M, Trefzer U, Ozel M, et al. Expression of the human endogenous retrovirus-K transmembrane envelope, Rec and Np9 proteins in melanomas and melanoma cell lines MELANOMA RESEARCH. 2006 JUN; 16 (3): 223-234	3	14	5	39
1754	5270 Muotri AR, Gage FH Generation of neuronal variability and complexity NATURE. 2006 JUN 28; 441 (7097): 1087-1093	3	39	12	96
1755	5273 Flanagan JM, Popendikyte V, Pozdniakovaite N, Sobolev M, Assadzadeh A, et al. Intra-and interindividual epigenetic variation in human germ cells AMERICAN JOURNAL OF HUMAN GENETICS. 2006 JUL; 79 (1): 67-84	3	41	8	71
1756	5278 Zink D The temporal program of DNA replication: new insights into old questions CHROMOSOMA. 2006 JUL; 115 (4): 273-287	3	24	5	95
1757	5290 Matsumoto T, Hamada M, Osanai M, Fujiwara H Essential domains for ribonucleoprotein complex formation required for retrotransposition of telomere-specific non-long terminal repeat retrotransposon SART1 MOLECULAR AND CELLULAR BIOLOGY. 2006 JUL; 26 (13): 5168-5179	3	6	7	36
1758	5305 Srebrow A, Kornblihtt AR The connection between splicing and cancer JOURNAL OF CELL SCIENCE. 2006 JUL 1; 119 (13): 2635-2641	3	68	4	72
1759	5307 Kuznetsov IB, Gou ZK, Li R, Hwang SW Using evolutionary and structural information to predict DNA-binding sites on DNA-binding proteins PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS. 2006 JUL 1; 64 (1): 19-27	3	28	1	26
1760	5342 Schibler L, Roig A, Mahe MF, Laurent P, Hayes H, et al. High-resolution comparative mapping among man, cattle and mouse suggests a role for repeat sequences in mammalian genome evolution BMC GENOMICS. 2006 AUG 1; 7: Art. No. 194	3	18	20	53
#	Date / Author / Journal	LCS	GCS	LCR	CR
1761	5348 Musova Z, Hedvicakova P, Mohrmann M, Tesarova M, Krepelova A, et al. A novel insertion of a rearranged L1 element in exon 44 of the dystrophin gene: Further evidence for possible bias in retroposon integration BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2006 AUG 18; 347 (1): 145-149	3	4	10	28
1762	5363 Hutter B, Helms V, Paulsen M Tandem repeats in the CpG islands of imprinted genes GENOMICS. 2006 SEP; 88 (3): 323-332	3	22	8	54
1763	5398 Stiller M, Green RE, Ronan M, Simons JF, Du L, et al. Patterns of nucleotide misincorporations during enzymatic amplification and direct large-scale sequencing of ancient DNA PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2006 SEP 12; 103 (37): 13578-13584	3	45	4	45
1764	5415 Le Rouzic A, Capy P Population genetics models of competition between transposable element subfamilies GENETICS. 2006 OCT; 174 (2): 785-793	3	8	11	64
1765	5422 Cheng C, Daigen M, Hirochika H Epigenetic regulation of the rice retrotransposon Tos17 MOLECULAR GENETICS AND GENOMICS. 2006 OCT; 276 (4): 378-390	3	22	7	51
1766	5433 Powers R, Copeland JC, Germer K, Mercier KA, Ramanathan V, et al. Comparison of protein active site structures for functional annotation of proteins and drug design PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS. 2006 OCT 1; 65 (1): 124-135	3	22	3	62
1767	5451 Kim S, Kim Y, Liang T, Sinsheimer JS, Chow SA A high-throughput method for cloning and sequencing human immunodeficiency virus type 1 integration sites JOURNAL OF VIROLOGY. 2006 NOV; 80 (22): 11313-11321	3	5	7	42
1768	5523 Kordis D, Lovsin N, Gubensek F Phylogenomic analysis of the L1 retrotransposons in Deuterostomia SYSTEMATIC BIOLOGY. 2006 DEC; 55 (6): 886-901	3	8	17	48
1769	5524 Shedlock AM Phylogenomic investigation of CR1 LINE diversity in reptiles SYSTEMATIC BIOLOGY. 2006 DEC; 55 (6): 902-911	3	11	14	65
1770	5583 Vavouri T, Walter K, Gilks WR, Lehner B, Elgar G Parallel evolution of conserved non-coding elements that target a common set of developmental regulatory genes from worms to humans GENOME BIOLOGY. 2007; 8 (2): Art. No. R15	3	19	4	57
#	Date / Author / Journal	LCS	GCS	LCR	CR
1771	5621 Buzdin A Human-specific endogenous retroviruses THESCIENTIFICWORLDJOURNAL. 2007; 7: 1848-1868	3	0	51	148
1772	5651 Hazkani-Covo E, Graur D A comparative analysis of numt evolution in human and chimpanzee MOLECULAR BIOLOGY AND EVOLUTION. 2007 JAN; 24 (1): 13-18	3	19	6	23
1773	5652 Zhao ZM, Jiang CZ Methylation-dependent transition rates are dependent on local sequence lengths and genomic regions MOLECULAR BIOLOGY AND EVOLUTION. 2007 JAN; 24 (1): 23-25	3	8	3	12
1774	5658 Visel A, Minovitsky S, Dubchak I, Pennacchio LA VISTA Enhancer Browser - a database of tissue-specific human enhancers NUCLEIC ACIDS RESEARCH. 2007 JAN; 35: D88-D92	3	23	5	17
1775	5668 Ram O, Ast G SR proteins: a foot on the exon before the transition from intron to exon definition TRENDS IN GENETICS. 2007 JAN; 23 (1): 5-7	3	11	5	24
1776	5676 Ellegren H Characteristics, causes and evolutionary consequences of male-biased mutation PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES. 2007 JAN 7; 274 (1606): 1-10	3	21	20	111
1777	5689 Mueller M, Martens L, Apweiler R Annotating the human proteome: Beyond establishing a parts list BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS. 2007 FEB; 1774 (2): 175-191	3	10	16	184
1778	5706 Shi X, Seluanov A, Gorbunova V Cell divisions are required for L1 retrotransposition MOLECULAR AND CELLULAR BIOLOGY. 2007 FEB; 27 (4): 1264-1270	3	6	14	39
1779	5733 Babushok DV, Ostertag EM, Kazazian HH Current topics in genome evolution: Molecular mechanisms of new gene formation CELLULAR AND MOLECULAR LIFE SCIENCES. 2007 MAR; 64 (5): 542-554	3	28	52	131
1780	5769 Sakai H, Koyanagi KO, Imanishi T, Itoh T, Gojobori T Frequent emergence and functional resurrection of processed pseudogenes in the human and mouse genomes GENE. 2007 MAR 15; 389 (2): 196-203	3	8	13	54
#	Date / Author / Journal	LCS	GCS	LCR	CR
1781	5818 Gasior SL, Preston G, Hedges DJ, Gilbert N, Moran JV, et al. Characterization of pre-insertion loci of de novo L1 insertions GENE. 2007 APR 1; 390 (1-2): 190-198	3	3	35	61
1782	5848 Messer PW, Arndt PF The majority of recent short DNA insertions in the human genome are tandem duplications MOLECULAR BIOLOGY AND EVOLUTION. 2007 MAY; 24 (5): 1190-1197	3	11	9	29
1783	5881 Schumann GG APOBEC3 proteins: major players in intracellular defence against LINE-1-mediated retrotransposition BIOCHEMICAL SOCIETY TRANSACTIONS. 2007 JUN; 35: 637-642	3	6	24	50
1784	5894 Weinstock GM ENCODE: More genomic empowerment GENOME RESEARCH. 2007 JUN; 17 (6): 667-668	3	11	6	9
1785	5946 Cordaux R, Srikanta D, Lee J, Stoneking M, Batzer MA In search of polymorphic Alu insertions with restricted geographic distributions GENOMICS. 2007 JUL; 90 (1): 154-158	3	3	14	27
1786	5975 Artamonova II, Gelfand MS Comparative genomics and evolution of alternative splicing: The pessimists' science CHEMICAL REVIEWS. 2007 AUG; 107 (8): 3407-3430	3	12	84	384
1787	5991 Matveev V, Nishihara H, Okada N Novel SINE families from salmons validate Parahucho (Salmonidae) as a distinct genus and give evidence that SINEs can incorporate LINE-related 3 '-tails of other SINEs MOLECULAR BIOLOGY AND EVOLUTION. 2007 AUG; 24 (8): 1656-1666	3	7	10	56
1788	6001 Spellman R, Llorian M, Smith CWJ Crossregulation and functional redundancy between the splicing regulator PTB and its paralogs nPTB and ROD1 MOLECULAR CELL. 2007 AUG 3; 27 (3): 420-434	3	37	8	66
1789	6033 Jiang CZ, Han L, Su B, Li WH, Zhao ZM Features and trend of loss of promoter-associated CpG islands in the human and mouse genomes MOLECULAR BIOLOGY AND EVOLUTION. 2007 SEP; 24 (9): 1991-2000	3	10	15	51
1790	6065 Lagerqvist J, Zwolak M, Di Ventra M Influence of the environment and probes on rapid DNA sequencing via transverse electronic transport BIOPHYSICAL JOURNAL. 2007 OCT; 93 (7): 2384-2390	3	14	3	42
#	Date / Author / Journal	LCS	GCS	LCR	CR
1791	6074 Fiston-Lavier AS, Anxolabehere D, Quesneville H A model of segmental duplication formation in Drosophila melanogaster GENOME RESEARCH. 2007 OCT; 17 (10): 1458-1470	3	10	15	61
1792	6137 Mersch B, Sela N, Ast G, Suhai S, Hotz-Wagenblatt A SERpredict: Detection of tissue-or tumor-specific isoforms generated through exonization of transposable elements BMC GENETICS. 2007 NOV 6; 8: Art. No. 78	3	3	11	36
1793	6144 Piriyapongsa J, Rutledge MT, Patel S, Borodovsky M, Jordan IK Evaluating the protein coding potential of exonized transposable element sequences BIOLOGY DIRECT. 2007 NOV 26; 2: Art. No. 31	3	9	16	59
1794	6160 He J, Lin L, Zhang P, Lindsay S Identification of DNA basepairing via tunnel-current decay NANO LETTERS. 2007 DEC; 7 (12): 3854-3858	3	14	4	21
1795	6180 Simons C, Makunin IV, Pheasant M, Mattick JS Maintenance of transposon-free regions throughout vertebrate evolution BMC GENOMICS. 2007 DEC 20; 8: Art. No. 470	3	6	14	32
1796	6274 Cantrell MA, Scott L, Brown CJ, Martinez AR, Wichman HA Loss of LINE-1 activity in the megabats GENETICS. 2008 JAN; 178 (1): 393-404	3	6	18	60
1797	6337 Irimia M, Rukov JL, Penny D, Garcia-Fernandez J, Vinther J, et al. Widespread evolutionary conservation of alternatively spliced exons in Caenorhabditis MOLECULAR BIOLOGY AND EVOLUTION. 2008 FEB; 25 (2): 375-382	3	13	17	50
1798	6342 Rodriguez J, Vives L, Jorda M, Morales C, Munoz M, et al. Genome-wide tracking of unmethylated DNA Alu repeats in normal and cancer cells NUCLEIC ACIDS RESEARCH. 2008 FEB; 36 (3): 770-784	3	11	20	74
1799	6387 Girard A, Hannon GJ Conserved themes in small-RNA-mediated transposon control TRENDS IN CELL BIOLOGY. 2008 MAR; 18 (3): 136-148	3	38	13	147
1800	6395 Uddin M, Goodman M, Erez O, Romero R, Liu G, et al. Distinct genomic signatures of adaptation in pre-and postnatal environments during human evolution PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2008 MAR 4; 105 (9): 3215-3220	3	9	5	56

Date / Author / Journal

LCS

GCS

LCR

1701

4237 Chen TM, Lu CC, Li WH

Prediction of splice sites with dependency graphs and their expanded bayesian networks

BIOINFORMATICS. 2005 FEB 15; 21 (4): 471-482

1702

4274 Karaoglu H, Lee CMY, Meyer W

Survey of simple sequence repeats in completed fungal genomes

MOLECULAR BIOLOGY AND EVOLUTION. 2005 MAR; 22 (3): 639-649

1703

4293 Campos JL, Urpi L, Sanmartin T, Gouyette C, Subirana JA

DNA coiled coils

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005 MAR 8; 102 (10): 3663-3666

1704

4302 Zhou Y, Mishra B

Quantifying the mechanisms for segmental duplications in mammalian genomes by statistical analysis and modeling

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005 MAR 15; 102 (11): 4051-4056

1705

4327 Alamgir ASM, Owens N, Lavignon M, Malik F, Evans LH

Precise identification of endogenous proviruses of NFS/N mice participating in recombination with Moloney ecotropic murine leukemia virus (MuLV) to generate polytropic MuLVs

JOURNAL OF VIROLOGY. 2005 APR; 79 (8): 4664-4671

1706

4343 Cohen-Gihon I, Lancet D, Yanai I

Modular genes with metazoan-specific domains have increased tissue specificity

TRENDS IN GENETICS. 2005 APR; 21 (4): 210-213

1707

4347 Alfano G, Vitiello C, Caccioppoli C, Caramico T, Carola A, et al.

Natural antisense transcripts associated with genes involved in eye development

HUMAN MOLECULAR GENETICS. 2005 APR 1; 14 (7): 913-923

1708

4360 Ruparel H, Bi LR, Li ZM, Bai XP, Kim DH, et al.

Design and synthesis of a 3 '-O-allyl photocleavable fluorescent nucleotide as a reversible terminator for DNA sequencing by synthesis

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005 APR 26; 102 (17): 5932-5937

1709

4389 Christensen T

Association of human endogenous retroviruses with multiple sclerosis and possible interactions with herpes viruses

REVIEWS IN MEDICAL VIROLOGY. 2005 MAY-JUN; 15 (3): 179-211

276

1710

4401 Schioth HB, Fredriksson R

The GRAFS classification system of G-protein coupled receptors in comparative perspective

GENERAL AND COMPARATIVE ENDOCRINOLOGY. 2005 MAY 15; 142 (1-2): 94-101

Date / Author / Journal

LCS

GCS

LCR

1711

4423 Le Rouzic A, Deceliere G

Models of the population genetics of transposable elements

GENETICS RESEARCH. 2005 JUN; 85 (3): 171-181

116

1712

4425 Zhang XHF, Leslie CS, Chasin LA

Dichotomous splicing signals in exon flanks

GENOME RESEARCH. 2005 JUN; 15 (6): 768-779

1713

4430 Oja M, Sperber GO, Blomberg J, Kaski S

Self-organizing map-based discovery and visualization of human endogenous retroviral sequence groups

INTERNATIONAL JOURNAL OF NEURAL SYSTEMS. 2005 JUN; 15 (3): 163-179

1714

4447 Kol G, Lev-Maor G, Ast G

Human-mouse comparative analysis reveals that branch-site plasticity contributes to splicing regulation

HUMAN MOLECULAR GENETICS. 2005 JUN 1; 14 (11): 1559-1568

1715

4461 Murray CG, Larsson TP, Hill T, Bjorklind R, Fredriksson R, et al.

Evaluation of EST-data using the genome assembly

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2005 JUN 17; 331 (4): 1566-1576

1716

4470 Pozzoli U, Sironi M

Silencers regulate both constitutive and alternative splicing events in mammals

CELLULAR AND MOLECULAR LIFE SCIENCES. 2005 JUL; 62 (14): 1579-1604

184

1717

4483 Horvath JE, Gulden CL, Vallente RU, Eichler MY, Ventura M, et al.

Punctuated duplication seeding events during the evolution of human chromosome 2p11

GENOME RESEARCH. 2005 JUL; 15 (7): 914-927

1718

4486 Lippert RA, Zhao XY, Florea L, Mobarry C, Istrail S

Finding anchors for genomic sequence comparison

JOURNAL OF COMPUTATIONAL BIOLOGY. 2005 JUL; 12 (6): 762-776

1719

4487 Claverie-Martin F, Flores C, Anton-Gamero M, Gonzalez-Acosta H, Garcia-Nieto V

The Alu insertion in the CLCN5 gene of a patient with Dent's disease leads to exon 11 skipping

JOURNAL OF HUMAN GENETICS. 2005 JUL; 50 (7): 370-374

1720

4525 Vavouri T, Elgar G

Prediction of cis-regulatory elements using binding site matrices - the successes, the failures and the reasons for both

CURRENT OPINION IN GENETICS & DEVELOPMENT. 2005 AUG; 15 (4): 395-402

Date / Author / Journal

LCS

GCS

LCR

1721

4541 Efferth T, Volm M

Pharmacogenetics for individualized cancer chemotherapy

PHARMACOLOGY & THERAPEUTICS. 2005 AUG; 107 (2): 155-176

289

1722

4553 Babak T, Blencowe BJ, Hughes TR

A systematic search for new mammalian noncoding RNAs indicates little conserved intergenic transcription

BMC GENOMICS. 2005 AUG 5; 6: Art. No. 104

1723

4568 Levanon K, Eisenberg E, Rechavi G, Levanon EY

Letter from the editor: Adenosine-to-inosine RNA editing in Alu repeats in the human genome

EMBO REPORTS. 2005 SEP; 6 (9): 831-835

1724

4586 Sicat J, Sutkowski N, Huber BT

Expression of human endogenous retrovirus HERV-K18 superantigen is elevated in juvenile rheumatoid arthritis

JOURNAL OF RHEUMATOLOGY. 2005 SEP; 32 (9): 1821-1831

1725

4588 Miller DG, Trobridge GD, Petek LM, Jacobs MA, Kaul R, et al.

Large-scale analysis of adeno-associated virus vector integration sites in normal human cells

JOURNAL OF VIROLOGY. 2005 SEP; 79 (17): 11434-11442

1726

4611 Holland PWH, Takahashi T

The evolution of homeobox genes: Implications for the study of brain development

BRAIN RESEARCH BULLETIN. 2005 SEP 15; 66 (4-6): 484-490

1727

4633 Schmegner C, Berger A, Vogel W, Hameister H, Assum G

An isochore transition zone in the NF1 gene region is a conserved landmark of chromosome structure and function

GENOMICS. 2005 OCT; 86 (4): 439-445

1728

4642 Youngson NA, Kocialkowski S, Peel N, Ferguson-Smith AC

A small family of sushi-class retrotransposon-derived genes in mammals and their relation to genomic imprinting

JOURNAL OF MOLECULAR EVOLUTION. 2005 OCT; 61 (4): 481-490

1729

4649 Cowan RK, Hoen DR, Schoen DJ, Bureau TE

MUSTANG is a novel family of domesticated transposase genes found in diverse angiosperms

MOLECULAR BIOLOGY AND EVOLUTION. 2005 OCT; 22 (10): 2084-2089

1730

4668 Pritsker M, Doniger TT, Kramer LC, Westcot SE, Lemischka IR

Diversification of stem cell molecular repertoire by alternative splicing

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005 OCT 4; 102 (40): 14290-14295

Date / Author / Journal

LCS

GCS

LCR

1731

4669 Bonizzoni P, Rizzi R, Pesole G

ASPIC: a novel method to predict the exon-intron structure of a gene that is optimally compatible to a set of transcript sequences

BMC BIOINFORMATICS. 2005 OCT 5; 6: Art. No. 244

1732

4688 Lazaridis KN, Juran BD

American gastroenterological association future trends committee report: The application of genomic and proteomic technologies to digestive disease diagnosis and treatment and their likely impact on gastroenterology clinical practice

GASTROENTEROLOGY. 2005 NOV; 129 (5): 1720-1752

112

1733

4696 Maksakova IA, Mager DL

Transcriptional regulation of early transposon elements, an active family of mouse long terminal repeat retrotransposons

JOURNAL OF VIROLOGY. 2005 NOV; 79 (22): 13865-13874

1734

4714 Blumenstiel JP, Hartl DL

Evidence for maternally transmitted small interfering RNA in the repression of transposition in Drosophila virilis

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005 NOV 1; 102 (44): 15965-15970

1735

4722 El-Sawy M, Kale SP, Dugan C, Nguyen TQ, Belancio V, et al.

Nickel stimulates L1 retrotransposition by a post-transcriptional mechanism

JOURNAL OF MOLECULAR BIOLOGY. 2005 NOV 25; 354 (2): 246-257

1736

4742 Varki A, Altheide TK

Comparing the human and chimpanzee genomes: Searching for needles in a haystack

GENOME RESEARCH. 2005 DEC; 15 (12): 1746-1758

133

1737

4794 Bhattacharyya RP, Remenyi A, Yeh BJ, Lim WA

Domains, motifs, and scaffolds: The role of modular interactions in the evolution and wiring of cell signaling circuits

ANNUAL REVIEW OF BIOCHEMISTRY. 2006; 75: 655-680

157

1738

4797 Schueler MG, Sullivan BA

Structural and functional dynamics of human centromeric chromatin

ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS. 2006; 7: 301-313

1739

4840 Stoye JP

Koala retrovirus: a genome invasion in real time

GENOME BIOLOGY. 2006; 7 (11): Art. No. 241

1740

4874 Farkash EA, Kao GD, Horman SR, Prak ETL

Gamma radiation increases endonuclease-dependent L1 retrotransposition in a cultured cell assay

NUCLEIC ACIDS RESEARCH. 2006; 34 (4): 1196-1204

Date / Author / Journal

LCS

GCS

LCR

1741

4925 Andreini C, Banci L, Bertini I, Rosato A

Counting the zinc-proteins encoded in the human genome

JOURNAL OF PROTEOME RESEARCH. 2006 JAN; 5 (1): 196-201

1742

4937 Schattner P, Barberan-Soler S, Lowe TM

A computational screen for mammalian pseudouridylation guide H/ACA RNAs

RNA-A PUBLICATION OF THE RNA SOCIETY. 2006 JAN; 12 (1): 15-25

1743

4964 Cordaux R, Batzer MA

Teaching an old dog new tricks: SINEs of canine genomic diversity

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2006 JAN 31; 103 (5): 1157-1158

1744

4984 Lipatov M, Arndt PF, Hwa T, Petrov DA

A novel method distinguishes between mutation rates and fixation biases in patterns of single-nucleotide substitution

JOURNAL OF MOLECULAR EVOLUTION. 2006 FEB; 62 (2): 168-175

1745

5024 Volik S, Raphael BJ, Huang GQ, Stratton MR, Bignel G, et al.

Decoding the fine-scale structure of a breast cancer genome and transcriptome

GENOME RESEARCH. 2006 MAR; 16 (3): 394-404

1746

5036 Semon M, Lobry JR, Duret L

No evidence for tissue-specific adaptation of synonymous codon usage in humans

MOLECULAR BIOLOGY AND EVOLUTION. 2006 MAR; 23 (3): 523-529

1747

5051 Stribinskis V, Ramos KS

Activation of human long interspersed nuclear element 1 retrotransposition by benzo(a)pyrene, an ubiquitous environmental carcinogen

CANCER RESEARCH. 2006 MAR 1; 66 (5): 2616-2620

1748

5058 Azubel M, Habib N, Sperling R, Sperling J

Native spliceosomes assemble with Pre-mRNA to form supraspliceosomes

JOURNAL OF MOLECULAR BIOLOGY. 2006 MAR 3; 356 (4): 955-966

1749

5064 Chen FC, Chen CJ, Ho JY, Chuang TJ

Identification and evolutionary analysis of novel exons and alternative splicing events using cross-species EST-to-genome comparisons in human, mouse and rat

BMC BIOINFORMATICS. 2006 MAR 15; 7: Art. No. 136

1750

5068 Chalberg TW, Portlock JL, Olivares EC, Thyagarajan B, Kirby PJ, et al.

Integration specificity of phage phi C31 integrase in the human genome

JOURNAL OF MOLECULAR BIOLOGY. 2006 MAR 17; 357 (1): 28-48

Date / Author / Journal

LCS

GCS

LCR

1751

5071 Taylor TD, Noguchi H, Totoki Y, Toyoda A, Kuroki Y, et al.

Human chromosome 11 DNA sequence and analysis including novel gene identification

NATURE. 2006 MAR 23; 440 (7083): 497-500

1752

5082 Pe'er I, Chretien YR, de Bakker PIW, Barrett JC, Daly MJ, et al.

Biases and reconciliation in estimates of linkage disequilibrium in the human genome

AMERICAN JOURNAL OF HUMAN GENETICS. 2006 APR; 78 (4): 588-603

1753

5233 Buscher K, Hahn S, Hofmann M, Trefzer U, Ozel M, et al.

Expression of the human endogenous retrovirus-K transmembrane envelope, Rec and Np9 proteins in melanomas and melanoma cell lines

MELANOMA RESEARCH. 2006 JUN; 16 (3): 223-234

1754

5270 Muotri AR, Gage FH

Generation of neuronal variability and complexity

NATURE. 2006 JUN 28; 441 (7097): 1087-1093

1755

5273 Flanagan JM, Popendikyte V, Pozdniakovaite N, Sobolev M, Assadzadeh A, et al.

Intra-and interindividual epigenetic variation in human germ cells

AMERICAN JOURNAL OF HUMAN GENETICS. 2006 JUL; 79 (1): 67-84

1756

5278 Zink D

The temporal program of DNA replication: new insights into old questions

CHROMOSOMA. 2006 JUL; 115 (4): 273-287

1757

5290 Matsumoto T, Hamada M, Osanai M, Fujiwara H

Essential domains for ribonucleoprotein complex formation required for retrotransposition of telomere-specific non-long terminal repeat retrotransposon SART1

MOLECULAR AND CELLULAR BIOLOGY. 2006 JUL; 26 (13): 5168-5179

1758

5305 Srebrow A, Kornblihtt AR

The connection between splicing and cancer

JOURNAL OF CELL SCIENCE. 2006 JUL 1; 119 (13): 2635-2641

1759

5307 Kuznetsov IB, Gou ZK, Li R, Hwang SW

Using evolutionary and structural information to predict DNA-binding sites on DNA-binding proteins

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS. 2006 JUL 1; 64 (1): 19-27

1760

5342 Schibler L, Roig A, Mahe MF, Laurent P, Hayes H, et al.

High-resolution comparative mapping among man, cattle and mouse suggests a role for repeat sequences in mammalian genome evolution

BMC GENOMICS. 2006 AUG 1; 7: Art. No. 194

Date / Author / Journal

LCS

GCS

LCR

1761

5348 Musova Z, Hedvicakova P, Mohrmann M, Tesarova M, Krepelova A, et al.

A novel insertion of a rearranged L1 element in exon 44 of the dystrophin gene: Further evidence for possible bias in retroposon integration

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2006 AUG 18; 347 (1): 145-149

1762

5363 Hutter B, Helms V, Paulsen M

Tandem repeats in the CpG islands of imprinted genes

GENOMICS. 2006 SEP; 88 (3): 323-332

1763

5398 Stiller M, Green RE, Ronan M, Simons JF, Du L, et al.

Patterns of nucleotide misincorporations during enzymatic amplification and direct large-scale sequencing of ancient DNA

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2006 SEP 12; 103 (37): 13578-13584

1764

5415 Le Rouzic A, Capy P

Population genetics models of competition between transposable element subfamilies

GENETICS. 2006 OCT; 174 (2): 785-793

1765

5422 Cheng C, Daigen M, Hirochika H

Epigenetic regulation of the rice retrotransposon Tos17

MOLECULAR GENETICS AND GENOMICS. 2006 OCT; 276 (4): 378-390

1766

5433 Powers R, Copeland JC, Germer K, Mercier KA, Ramanathan V, et al.

Comparison of protein active site structures for functional annotation of proteins and drug design

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS. 2006 OCT 1; 65 (1): 124-135

1767

5451 Kim S, Kim Y, Liang T, Sinsheimer JS, Chow SA

A high-throughput method for cloning and sequencing human immunodeficiency virus type 1 integration sites

JOURNAL OF VIROLOGY. 2006 NOV; 80 (22): 11313-11321

1768

5523 Kordis D, Lovsin N, Gubensek F

Phylogenomic analysis of the L1 retrotransposons in Deuterostomia

SYSTEMATIC BIOLOGY. 2006 DEC; 55 (6): 886-901

1769

5524 Shedlock AM

Phylogenomic investigation of CR1 LINE diversity in reptiles

SYSTEMATIC BIOLOGY. 2006 DEC; 55 (6): 902-911

1770

5583 Vavouri T, Walter K, Gilks WR, Lehner B, Elgar G

Parallel evolution of conserved non-coding elements that target a common set of developmental regulatory genes from worms to humans

GENOME BIOLOGY. 2007; 8 (2): Art. No. R15

Date / Author / Journal

1771

Human-specific endogenous retroviruses

THESCIENTIFICWORLDJOURNAL. 2007; 7: 1848-1868

148

1772

5651 Hazkani-Covo E, Graur D

A comparative analysis of numt evolution in human and chimpanzee

MOLECULAR BIOLOGY AND EVOLUTION. 2007 JAN; 24 (1): 13-18

1773

5652 Zhao ZM, Jiang CZ

Methylation-dependent transition rates are dependent on local sequence lengths and genomic regions

MOLECULAR BIOLOGY AND EVOLUTION. 2007 JAN; 24 (1): 23-25

1774

5658 Visel A, Minovitsky S, Dubchak I, Pennacchio LA

VISTA Enhancer Browser - a database of tissue-specific human enhancers

NUCLEIC ACIDS RESEARCH. 2007 JAN; 35: D88-D92

1775

5668 Ram O, Ast G

SR proteins: a foot on the exon before the transition from intron to exon definition

TRENDS IN GENETICS. 2007 JAN; 23 (1): 5-7

1776

5676 Ellegren H

Characteristics, causes and evolutionary consequences of male-biased mutation

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES. 2007 JAN 7; 274 (1606): 1-10

111

1777

5689 Mueller M, Martens L, Apweiler R

Annotating the human proteome: Beyond establishing a parts list

BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS. 2007 FEB; 1774 (2): 175-191

184

1778

5706 Shi X, Seluanov A, Gorbunova V

Cell divisions are required for L1 retrotransposition

MOLECULAR AND CELLULAR BIOLOGY. 2007 FEB; 27 (4): 1264-1270

1779

5733 Babushok DV, Ostertag EM, Kazazian HH

Current topics in genome evolution: Molecular mechanisms of new gene formation

CELLULAR AND MOLECULAR LIFE SCIENCES. 2007 MAR; 64 (5): 542-554

131

1780

5769 Sakai H, Koyanagi KO, Imanishi T, Itoh T, Gojobori T

Frequent emergence and functional resurrection of processed pseudogenes in the human and mouse genomes

GENE. 2007 MAR 15; 389 (2): 196-203

Date / Author / Journal

LCS

GCS

LCR

1781

5818 Gasior SL, Preston G, Hedges DJ, Gilbert N, Moran JV, et al.

Characterization of pre-insertion loci of de novo L1 insertions

GENE. 2007 APR 1; 390 (1-2): 190-198

1782

5848 Messer PW, Arndt PF

The majority of recent short DNA insertions in the human genome are tandem duplications

MOLECULAR BIOLOGY AND EVOLUTION. 2007 MAY; 24 (5): 1190-1197

1783

5881 Schumann GG

APOBEC3 proteins: major players in intracellular defence against LINE-1-mediated retrotransposition

BIOCHEMICAL SOCIETY TRANSACTIONS. 2007 JUN; 35: 637-642

1784

5894 Weinstock GM

ENCODE: More genomic empowerment

GENOME RESEARCH. 2007 JUN; 17 (6): 667-668

1785

5946 Cordaux R, Srikanta D, Lee J, Stoneking M, Batzer MA

In search of polymorphic Alu insertions with restricted geographic distributions

GENOMICS. 2007 JUL; 90 (1): 154-158

1786

5975 Artamonova II, Gelfand MS

Comparative genomics and evolution of alternative splicing: The pessimists' science

CHEMICAL REVIEWS. 2007 AUG; 107 (8): 3407-3430

384

1787

5991 Matveev V, Nishihara H, Okada N

Novel SINE families from salmons validate Parahucho (Salmonidae) as a distinct genus and give evidence that SINEs can incorporate LINE-related 3 '-tails of other SINEs

MOLECULAR BIOLOGY AND EVOLUTION. 2007 AUG; 24 (8): 1656-1666

1788

6001 Spellman R, Llorian M, Smith CWJ

Crossregulation and functional redundancy between the splicing regulator PTB and its paralogs nPTB and ROD1

MOLECULAR CELL. 2007 AUG 3; 27 (3): 420-434

1789

6033 Jiang CZ, Han L, Su B, Li WH, Zhao ZM

Features and trend of loss of promoter-associated CpG islands in the human and mouse genomes

MOLECULAR BIOLOGY AND EVOLUTION. 2007 SEP; 24 (9): 1991-2000

1790

6065 Lagerqvist J, Zwolak M, Di Ventra M

Influence of the environment and probes on rapid DNA sequencing via transverse electronic transport

BIOPHYSICAL JOURNAL. 2007 OCT; 93 (7): 2384-2390

Date / Author / Journal

LCS

GCS

LCR

1791

6074 Fiston-Lavier AS, Anxolabehere D, Quesneville H

A model of segmental duplication formation in Drosophila melanogaster

GENOME RESEARCH. 2007 OCT; 17 (10): 1458-1470

1792

6137 Mersch B, Sela N, Ast G, Suhai S, Hotz-Wagenblatt A

SERpredict: Detection of tissue-or tumor-specific isoforms generated through exonization of transposable elements

BMC GENETICS. 2007 NOV 6; 8: Art. No. 78

1793

6144 Piriyapongsa J, Rutledge MT, Patel S, Borodovsky M, Jordan IK

Evaluating the protein coding potential of exonized transposable element sequences

BIOLOGY DIRECT. 2007 NOV 26; 2: Art. No. 31

1794

6160 He J, Lin L, Zhang P, Lindsay S

Identification of DNA basepairing via tunnel-current decay

NANO LETTERS. 2007 DEC; 7 (12): 3854-3858

1795

6180 Simons C, Makunin IV, Pheasant M, Mattick JS

Maintenance of transposon-free regions throughout vertebrate evolution

BMC GENOMICS. 2007 DEC 20; 8: Art. No. 470

1796

6274 Cantrell MA, Scott L, Brown CJ, Martinez AR, Wichman HA

Loss of LINE-1 activity in the megabats

GENETICS. 2008 JAN; 178 (1): 393-404

1797

6337 Irimia M, Rukov JL, Penny D, Garcia-Fernandez J, Vinther J, et al.

Widespread evolutionary conservation of alternatively spliced exons in Caenorhabditis

MOLECULAR BIOLOGY AND EVOLUTION. 2008 FEB; 25 (2): 375-382

1798

6342 Rodriguez J, Vives L, Jorda M, Morales C, Munoz M, et al.

Genome-wide tracking of unmethylated DNA Alu repeats in normal and cancer cells

NUCLEIC ACIDS RESEARCH. 2008 FEB; 36 (3): 770-784

1799

6387 Girard A, Hannon GJ

Conserved themes in small-RNA-mediated transposon control

TRENDS IN CELL BIOLOGY. 2008 MAR; 18 (3): 136-148

147

1800

6395 Uddin M, Goodman M, Erez O, Romero R, Liu G, et al.

Distinct genomic signatures of adaptation in pre-and postnatal environments during human evolution

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2008 MAR 4; 105 (9): 3215-3220

Initial sequencing and analysis of the human genome (Lander) The papers citing Lander ES, et al. "Initial sequencing and analysis of the human genome." NATURE. 2001 FEB 15; 409 (6822): 860-921	Historiographs	Glossary HistCite Guide About Grand Totals: LCS 38623, GCS 253809, CR 422506 Collection span: 2000 - 2010
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