HistCite - Initial sequencing and analysis of the human genome (Lander)

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#	Date / Author / Journal	LCS	GCS	LCR	CR
1201	6984 Schubert C The genomic basis of the Williams - Beuren syndrome CELLULAR AND MOLECULAR LIFE SCIENCES. 2009 APR; 66 (7): 1178-1197	0	1	9	194
1202	6995 Fullwood MJ, Wei CL, Liu ET, Ruan YJ Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses GENOME RESEARCH. 2009 APR; 19 (4): 521-532	1	8	9	102
1203	6998 Kulski JK, Shigenari A, Shiina T, Hosomichi K, Yawata M, et al. HLA-A allele associations with viral MER9-LTR nucleotide sequences at two distinct loci within the MHC alpha block IMMUNOGENETICS. 2009 APR; 61 (4): 257-270	0	0	9	29
1204	7002 Ciuffi A, Ronen K, Brady T, Malani N, Wang G, et al. Methods for integration site distribution analyses in animal cell genomes METHODS. 2009 APR; 47 (4): 261-268	0	1	9	95
1205	7010 Nelson W, Soderlund C Integrating sequence with FPC fingerprint maps NUCLEIC ACIDS RESEARCH. 2009 APR; 37 (5): Art. No. e36	0	2	9	37
1206	7076 Li JZ, Chen X, Gong XL, Liu Y, Feng H, et al. A transcript profiling approach reveals the zinc finger transcription factor ZNF191 is a pleiotropic factor BMC GENOMICS. 2009 MAY 22; 10: Art. No. 241	0	0	9	48
1207	7125 Mazzuchelli J, Martins C Genomic organization of repetitive DNAs in the cichlid fish Astronotus ocellatus GENETICA. 2009 JUL; 136 (3): 461-469	0	1	9	55
1208	7133 Parmley JL, Huynen MA Clustering of Codons with Rare Cognate tRNAs in Human Genes Suggests an Extra Level of Expression Regulation PLOS GENETICS. 2009 JUL; 5 (7): Art. No. e1000548	0	0	9	51
1209	7150 Granzotto A, Lopes FR, Lerat E, Vieira C, Carareto CMA The evolutionary dynamics of the Helena retrotransposon revealed by sequenced Drosophila genomes BMC EVOLUTIONARY BIOLOGY. 2009 JUL 22; 9: Art. No. 174	0	0	9	49
1210	7169 Nikolaev SI, Deutsch S, Genolet R, Borel C, Parand L, et al. Transcriptional and post-transcriptional profile of human chromosome 21 GENOME RESEARCH. 2009 AUG; 19 (8): 1471-1479	0	0	9	61
#	Date / Author / Journal	LCS	GCS	LCR	CR
1211	7217 Farnham PJ Insights from genomic profiling of transcription factors NATURE REVIEWS GENETICS. 2009 SEP; 10 (9): 605-616	0	5	9	82
1212	7251 Xiao XS, Wang ZF, Jang MY, Nutiu R, Wang ET, et al. Splice site strength-dependent activity and genetic buffering by poly-G runs NATURE STRUCTURAL & MOLECULAR BIOLOGY. 2009 OCT; 16 (10): 1094-U119	0	1	9	52
1213	7262 Zhou WY, Calciano MA, Jordan H, Brenner M, Johnson S, et al. High resolution analysis of the human transcriptome: detection of extensive alternative splicing independent of transcriptional activity BMC GENETICS. 2009 OCT 5; 10: Art. No. 63	0	0	9	39
1214	7293 Harris CR, DeWan A, Zupnick A, Normart R, Gabriel A, et al. p53 responsive elements in human retrotransposons ONCOGENE. 2009 NOV; 28 (44): 3857-3865	0	0	9	39
1215	7342 Li J, Han K, Xing JC, Kim HS, Rogers J, et al. Phylogeny of the macaques (Cercopithecidae: Macaca) based on Alu elements GENE. 2009 DEC 15; 448 (2): 242-249	0	1	9	61
1216	149 Zelenin AV, Badaeva ED, Muravenko OV Introduction into plant genomics MOLECULAR BIOLOGY. 2001 MAY-JUN; 35 (3): 285-293	0	1	8	89
1217	517 Scherer SW, Cheung J Discovery of the human genome sequence in the public and private databases CURRENT BIOLOGY. 2001 OCT 16; 11 (20): R808-R811	2	2	8	8
1218	968 Remm M, Metspalu A High-density genotyping and linkage disequilibrium in the human genome using chromosome 22 as a model CURRENT OPINION IN CHEMICAL BIOLOGY. 2002 FEB; 6 (1): 24-30	2	4	8	58
1219	1269 Judson R, Salisbury B, Schneider J, Windemuth A, Stephens JC How many SNPs does a genome-wide haplotype map require? PHARMACOGENOMICS. 2002 MAY; 3 (3): 379-391	4	50	8	46
1220	1330 [Anon] Upstream - news in genomics COMPARATIVE AND FUNCTIONAL GENOMICS. 2002 JUN; 3 (3): 221-225	0	0	8	23
#	Date / Author / Journal	LCS	GCS	LCR	CR
1221	1389 Stahura FL, Bajorath J Bio-and chemo-informatics beyond data management: crucial challenges and future opportunities DRUG DISCOVERY TODAY. 2002 JUN 1; 7 (11): S41-S47	1	9	8	44
1222	1390 Duckworth DM, Sanseau P In silico identification of novel therapeutic targets DRUG DISCOVERY TODAY. 2002 JUN 1; 7 (11): S64-S69	2	6	8	61
1223	1532 Thomas JW, Prasad AB, Summers TJ, Lee-Lin SQ, Maduro VVB, et al. Parallel construction of orthologous sequence-ready clone contig maps in multiple species GENOME RESEARCH. 2002 AUG; 12 (8): 1277-1285	17	44	8	31
1224	1603 Xie HQ, Zhu W, Wasserman A, Grebinskiy V, Olson A, et al. Computational analysis of alternative splicing using EST tissue information GENOMICS. 2002 SEP; 80 (3): 326-330	11	29	8	31
1225	1679 Medstrand P, van de Lagemaat LN, Mager DL Retroelement distributions in the human genome: Variations associated with age and proximity to genes GENOME RESEARCH. 2002 OCT; 12 (10): 1483-1495	72	105	8	47
1226	1715 Katsanis N, Worley KC, Gonzalez G, Ansley SJ, Lupski JR A computational/functional genomics approach for the enrichment of the retinal transcriptome and the identification of positional candidate retinopathy genes PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 OCT 29; 99 (22): 14326-14331	4	22	8	30
1227	1721 Bernaola-Galvan P, Carpena P, Roman-Roldan R, Oliver JL Study of statistical correlations in DNA sequences GENE. 2002 OCT 30; 300 (1-2): 105-115	8	33	8	56
1228	1746 Kaessmann H, Zollner S, Nekrutenko A, Li WH Signatures of domain shuffling in the human genome GENOME RESEARCH. 2002 NOV; 12 (11): 1642-1650	8	41	8	44
1229	1780 Koonin EV, Wolf YI, Karev GP The structure of the protein universe and genome evolution NATURE. 2002 NOV 14; 420 (6912): 218-223	11	203	8	76
1230	1803 Gibson G, Honeycutt E The evolution of developmental regulatory pathways CURRENT OPINION IN GENETICS & DEVELOPMENT. 2002 DEC; 12 (6): 695-700	0	7	8	42
#	Date / Author / Journal	LCS	GCS	LCR	CR
1231	1829 Chelala C, Debignes MD, Imbeaud S, Zoorob R, Auffray C, et al. Inconsistencies between maps of human chromosome 22 correlate with increased frequency of disease-related loci JOURNAL OF BIOLOGICAL SYSTEMS. 2002 DEC; 10 (4): 303-317	1	1	8	20
1232	1911 Gentile A, D'Alessandro L, Medico E Gene trapping: a multi-purpose tool for functional genomics BIOTECHNOLOGY & GENETIC ENGINEERING REVIEWS, VOL 20. 2003; 20: 77-100	0	0	8	64
1233	1967 Szak ST, Pickeral OK, Landsman D, Boeke JD Identifying related L1 retrotransposons by analyzing 3 ' transduced sequences GENOME BIOLOGY. 2003; 4 (5): Art. No. R30	5	7	8	54
1234	1972 Cheung J, Wilson MD, Zhang JJ, Khaja R, MacDonald JR, et al. Recent segmental and gene duplications in the mouse genome GENOME BIOLOGY. 2003; 4 (8): Art. No. R47	19	44	8	44
1235	2015 Robinson-Rechavi M, Laudet V Bioinformatics of nuclear receptors NUCELAR RECEPTORS. 2003; 364: 95-118	0	9	8	73
1236	2173 Brown JR Ancient horizontal gene transfer NATURE REVIEWS GENETICS. 2003 FEB; 4 (2): 121-132	4	110	8	131
1237	2256 Venter JC, Levy S, Stockwell T, Remington K, Halpern A Massive parallelism, randomness and genomic advances NATURE GENETICS. 2003 MAR; 33: 219-227	3	24	8	139
1238	2273 Paulding CA, Ruvolo M, Haber DA The Tre2 (USP6) oncogene is a hominoid-specific gene PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 MAR 4; 100 (5): 2507-2511	14	52	8	28
1239	2287 Adams MD, Sutton GG, Smith HO, Myers EW, Venter JC The independence of our genome assemblies PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 MAR 18; 100 (6): 3025-3026	6	8	8	13
1240	2295 Insel TR, Collins FS Psychiatry in the genomics era AMERICAN JOURNAL OF PSYCHIATRY. 2003 APR; 160 (4): 616-620	0	30	8	26
#	Date / Author / Journal	LCS	GCS	LCR	CR
1241	2310 Giardine B, Elnitski L, Riemer C, Makalowska L, Schwartz S, et al. GALA, a database for genomic sequence alignments and annotations GENOME RESEARCH. 2003 APR; 13 (4): 732-741	7	30	8	34
1242	2331 Muller M, Kersten S Nutrigenomics: goals and strategies NATURE REVIEWS GENETICS. 2003 APR; 4 (4): 315-322	7	171	8	100
1243	2343 Emes RD, Goodstadt L, Winter EE, Ponting CP Comparison of the genomes of human and mouse lays the foundation of genome zoology HUMAN MOLECULAR GENETICS. 2003 APR 1; 12 (7): 701-709	18	59	8	119
1244	2352 Snyder M, Gerstein M Genomics - Defining genes in the genomics era SCIENCE. 2003 APR 11; 300 (5617): 258-260	16	54	8	29
1245	2389 Zhang ZL, Gerstein M Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome GENOMICS. 2003 MAY; 81 (5): 468-480	3	11	8	47
1246	2393 Sverdlov ED DNA in a cell: From a molecular icon to the problem of "what is life?" HERALD OF THE RUSSIAN ACADEMY OF SCIENCES. 2003 MAY-JUN; 73 (3): 262-269	0	2	8	29
1247	2452 Alarcon-Riquelme ME Functional genomics in the study of autoimmune diseases AUTOIMMUNITY REVIEWS. 2003 JUN; 2 (4): 177-180	0	1	8	29
1248	2463 Karlin S, Mrazek J, Gentles AJ Genome comparisons and analysis CURRENT OPINION IN STRUCTURAL BIOLOGY. 2003 JUN; 13 (3): 344-352	0	10	8	51
1249	2483 Kawasawa Y, McKenzie LM, Hill DP, Bono H, Yanagisawa M, et al. G protein-coupled receptor genes in the FANTOM2 database GENOME RESEARCH. 2003 JUN; 13 (6B): 1466-1477	2	12	8	62
1250	2504 Navarro JD, Niranjan V, Peri S, Jonnalagadda CK, Pandey A From biological databases to platforms for biomedical discovery TRENDS IN BIOTECHNOLOGY. 2003 JUN; 21 (6): 263-268	2	12	8	29
#	Date / Author / Journal	LCS	GCS	LCR	CR
1251	2516 Oduru S, Campbell JL, Karri S, Hendry WJ, Khan SA, et al. Gene discovery in the hamster: a comparative genomics approach for gene annotation by sequencing of hamster testis cDNAs BMC GENOMICS. 2003 JUN 3; 4: Art. No. 22	0	2	8	43
1252	2526 Bloom FE Science as a way of life: Perplexities of a physician-scientist SCIENCE. 2003 JUN 13; 300 (5626): 1680-1685	0	21	8	74
1253	2533 Skaletsky H, Kuroda-Kawaguchi T, Minx PJ, Cordum HS, Hillier L, et al. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes NATURE. 2003 JUN 19; 423 (6942): 825-U2	42	506	8	50
1254	2555 Watkins WS, Rogers AR, Ostler CT, Wooding S, Bamshad MJ, et al. Genetic variation among world populations: Inferences from 100 Alu insertion polymorphisms GENOME RESEARCH. 2003 JUL; 13 (7): 1607-1618	31	88	8	81
1255	2557 Bouneau L, Fischer C, Ozouf-Costaz C, Froschauer A, Jaillon O, et al. An active non-LTR retrotransposon with tandem structure in the compact genome of the pufferfish Tetraodon nigroviridis GENOME RESEARCH. 2003 JUL; 13 (7): 1686-1695	10	19	8	47
1256	2630 Oliver C, Douady CJ, Carels N, Hughes S, Bucciarelli G, et al. Using analytical ultracentrifugation to study compositional variation in vertebrate genomes EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS. 2003 AUG; 32 (5): 418-426	0	0	8	55
1257	2641 Larkin DM, Everts-van der Wind A, Rebeiz M, Schweitzer PA, Bachman S, et al. A cattle-human comparative map built with cattle BAC-ends and human genome sequence GENOME RESEARCH. 2003 AUG; 13 (8): 1966-1972	14	78	8	25
1258	2656 Vienne A, Rasmussen J, Abi-Rached L, Pontarotti P, Gilles A Systematic phylogenomic evidence of en bloc duplication of the ancestral 8p11.21-8p21.3-like region MOLECULAR BIOLOGY AND EVOLUTION. 2003 AUG; 20 (8): 1290-1298	5	24	8	46
1259	2714 Huntley D, Hummerich H, Smedley D, Kittivoravitkul S, McCarthy M, et al. GANESH: Software for customized annotation of genome regions GENOME RESEARCH. 2003 SEP; 13 (9): 2195-2202	0	2	8	18
1260	2737 Ho, ehe MR Haplotypes and the systematic analysis of genetic variation in genes and genomes PHARMACOGENOMICS. 2003 SEP; 4 (5): 547-570	0	20	8	106
#	Date / Author / Journal	LCS	GCS	LCR	CR
1261	2805 Ge H, Walhout AJM, Vidal M Integrating 'omic' information: a bridge between genomics and systems biology TRENDS IN GENETICS. 2003 OCT; 19 (10): 551-560	13	160	8	64
1262	2879 Wen SY, Zhang CT Identification of isochore boundaries in the human genome using the technique of wavelet multiresolution analysis BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2003 NOV 7; 311 (1): 215-222	5	9	8	31
1263	2906 Carlton JM Genome sequencing and comparative genomics of tropical disease pathogens CELLULAR MICROBIOLOGY. 2003 DEC; 5 (12): 861-873	1	7	8	85
1264	2913 Swanson WJ Adaptive evolution of genes and gene families CURRENT OPINION IN GENETICS & DEVELOPMENT. 2003 DEC; 13 (6): 617-622	1	9	8	56
1265	2928 Xie T, Rowen L, Aguado B, Ahearn ME, Madan A, et al. Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse GENOME RESEARCH. 2003 DEC; 13 (12): 2621-2636	2	25	8	67
1266	2937 Cardazzo B, Bargelloni L, Toffolatti L, Patarnello T Intervening sequences in paralogous genes: A comparative genomic approach to study the evolution of X chromosome introns MOLECULAR BIOLOGY AND EVOLUTION. 2003 DEC; 20 (12): 2034-2041	0	5	8	27
1267	2950 Brown D, Superti-Furga G Rediscovering the sweet spot in drug discovery DRUG DISCOVERY TODAY. 2003 DEC 1; 8 (23): 1067-1077	2	41	8	42
1268	2999 Gladyshev VN, Kryukov GV, Fomenko DE, Hatfield DL Identification of trace element - Containing proteins in genomic databases ANNUAL REVIEW OF NUTRITION. 2004; 24: 579-596	1	23	8	74
1269	3009 Oiwa NN, Glazier JA Self-similar mitochondrial DNA CELL BIOCHEMISTRY AND BIOPHYSICS. 2004; 41 (1): 41-62	1	5	8	63
1270	3038 Bostanci A Sequencing human genomes FROM MOLECULAR GENETICS TO GENOMICS. 2004; 20: 158-179	1	2	8	49
#	Date / Author / Journal	LCS	GCS	LCR	CR
1271	3046 Hillman RT, Green RE, Brenner SE An unappreciated role for RNA surveillance GENOME BIOLOGY. 2004; 5 (2): Art. No. R8	19	84	8	65
1272	3055 Huang H, Winter EE, Wang HJ, Weinstock KG, Xing HM, et al. Evolutionary conservation and selection of human disease gene orthologs in the rat and mouse genomes GENOME BIOLOGY. 2004; 5 (7): Art. No. R47	8	35	8	49
1273	3077 Druker R, Whitelaw E Retrotransposon-derived elements in the mammalian genome: A potential source of disease JOURNAL OF INHERITED METABOLIC DISEASE. 2004; 27 (3): 319-330	9	25	8	67
1274	3129 Jekosch K The zebrafish genome project: Sequence analysis and annotation ZEBRAFISH:2ND EDITION GENETICS GENOMICS AND INFORMATICS. 2004; 77: 225-239	1	10	8	23
1275	3138 Branda CS, Dymecki SM Talking about a revolution: The impact of site-specific recombinases on genetic analyses in mice DEVELOPMENTAL CELL. 2004 JAN; 6 (1): 7-28	1	208	8	198
1276	3181 Furano AV, Duvernell DD, Boissinot S L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish TRENDS IN GENETICS. 2004 JAN; 20 (1): 9-14	31	41	8	48
1277	3190 Thanaraj TA, Stamm S, Clark F, Riethoven JJ, Le Texier V, et al. ASD: the Alternative Splicing Database NUCLEIC ACIDS RESEARCH. 2004 JAN 1; 32: D64-D69	25	109	8	30
1278	3194 Kikuno R, Nagase T, Nakayama M, Koga H, Okazaki N, et al. HUGE: a database for human KIAA proteins, a 2004 update integrating HUGEppi and ROUGE NUCLEIC ACIDS RESEARCH. 2004 JAN 1; 32: D502-D504	3	42	8	15
1279	3242 Hesse M, Zimek A, Weber K, Magin TM Comprehensive analysis of keratin gene clusters in humans and rodents EUROPEAN JOURNAL OF CELL BIOLOGY. 2004 FEB; 83 (1): 19-26	3	68	8	31
1280	3245 Chapman MA, Donaldson IJ, Gilbert J, Grafham D, Rogers J, et al. Analysis of multiple genomic sequence alignments: A web resource, online tools, and lessons learned from analysis of mammalian SCL loci GENOME RESEARCH. 2004 FEB; 14 (2): 313-318	3	23	8	36
#	Date / Author / Journal	LCS	GCS	LCR	CR
1281	3301 Onyango P The role of emerging genomics and proteomics technologies in cancer drug target discovery CURRENT CANCER DRUG TARGETS. 2004 MAR; 4 (2): 111-124	1	9	8	97
1282	3360 Wu JQ, Garcia AM, Hulyk S, Sneed A, Kowis C, et al. Large-scale RT-PCR recovery of full-length cDNA clones BIOTECHNIQUES. 2004 APR; 36 (4): 690-+	2	7	8	24
1283	3394 Bredel M, Jacoby E Chemogenomics: An emerging strategy for rapid target and drug discovery NATURE REVIEWS GENETICS. 2004 APR; 5 (4): 262-275	0	88	8	144
1284	3408 Hayashizaki Y, Kanamori M Dynamic transcriptome of mice TRENDS IN BIOTECHNOLOGY. 2004 APR; 22 (4): 161-167	1	11	8	39
1285	3423 Hui LJ, Zhang X, Wu X, Lin ZX, Wang QK, et al. Identification of alternatively spliced mRNA variants related to cancers by genome-wide ESTs alignment ONCOGENE. 2004 APR 15; 23 (17): 3013-3023	6	41	8	39
1286	3426 Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, et al. A gene atlas of the mouse and human protein-encoding transcriptomes PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 APR 20; 101 (16): 6062-6067	58	820	8	36
1287	3433 Wang E, Ding YC, Flodman P, Kidd JR, Kidd KK, et al. The genetic architecture of selection at the human dopamine receptor D4 (DRD4) gene locus AMERICAN JOURNAL OF HUMAN GENETICS. 2004 MAY; 74 (5): 931-944	0	84	8	59
1288	3445 Dermitzakis ET, Kirkness E, Schwarz S, Birney E, Reymond A, et al. Comparison of human chromosome 21 conserved nongenic sequences (CNGs) with the mouse and dog genomes shows that their selective constraint is independent of their genic environment GENOME RESEARCH. 2004 MAY; 14 (5): 852-859	12	44	8	32
1289	3447 Searle SMJ, Gilbert J, Iyer V, Clamp M The Otter annotation system GENOME RESEARCH. 2004 MAY; 14 (5): 963-970	5	17	8	14
1290	3464 Tefferi A, Spelsberg TC Primer on medical genomics - The end of the beginning MAYO CLINIC PROCEEDINGS. 2004 MAY; 79 (5): 659-660	0	1	8	18
#	Date / Author / Journal	LCS	GCS	LCR	CR
1291	3468 Borgono CA, Michael IP, Diamandis EP Human tissue kallikreins: Physiologic roles and applications in cancer MOLECULAR CANCER RESEARCH. 2004 MAY; 2 (5): 257-280	1	134	8	402
1292	3476 Pagani F, Baralle FE Genomic variants in exons and introns: identifying the splicing spoilers NATURE REVIEWS GENETICS. 2004 MAY; 5 (5): 389-U2	11	152	8	63
1293	3485 Galante PAF, Sakabe NJ, Kirschbaum-Slager N, De Souza SJ Detection and evaluation of intron retention events in the human transcriptome RNA-A PUBLICATION OF THE RNA SOCIETY. 2004 MAY; 10 (5): 757-765	7	55	8	29
1294	3574 Gibbons R, Dugaiczyk LJ, Girke T, Duistermars B, Zielinski R, et al. Distinguishing humans from great apes with AluYb8 repeats JOURNAL OF MOLECULAR BIOLOGY. 2004 JUN 11; 339 (4): 721-729	7	12	8	34
1295	3614 Kudla G, Helwak A, Lipinski L Gene conversion and GC-content evolution in mammalian Hsp70 MOLECULAR BIOLOGY AND EVOLUTION. 2004 JUL; 21 (7): 1438-1444	5	19	8	39
1296	3616 Hughes AL, Friedman R Pattern of divergence of amino acid sequences encoded by paralogous genes in human and pufferfish MOLECULAR PHYLOGENETICS AND EVOLUTION. 2004 JUL; 32 (1): 337-343	0	6	8	35
1297	3633 Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, et al. Genome evolution in yeasts NATURE. 2004 JUL 1; 430 (6995): 35-44	18	428	8	34
1298	3667 Clark KJ, Geurts AM, Bell JB, Hackett PB Transposon vectors for gene-trap insertional mutagenesis in vertebrates GENESIS. 2004 AUG; 39 (4): 225-233	3	22	8	54
1299	3670 Emes RD, Riley MC, Laukaitis CM, Goodstadt L, Karn RC, et al. Comparative evolutionary genomics of androgen-binding protein genes GENOME RESEARCH. 2004 AUG; 14 (8): 1516-1529	2	14	8	75
1300	3704 Caenepeel S, Charydczak G, Sudarsanam S, Hunter T, Manning G The mouse kinome: Discovery and comparative genomics of all mouse protein kinases PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 AUG 10; 101 (32): 11707-11712	4	94	8	31

Date / Author / Journal

1201

The genomic basis of the Williams - Beuren syndrome

CELLULAR AND MOLECULAR LIFE SCIENCES. 2009 APR; 66 (7): 1178-1197

194

1202

6995 Fullwood MJ, Wei CL, Liu ET, Ruan YJ

Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses

GENOME RESEARCH. 2009 APR; 19 (4): 521-532

102

1203

6998 Kulski JK, Shigenari A, Shiina T, Hosomichi K, Yawata M, et al.

HLA-A allele associations with viral MER9-LTR nucleotide sequences at two distinct loci within the MHC alpha block

IMMUNOGENETICS. 2009 APR; 61 (4): 257-270

1204

7002 Ciuffi A, Ronen K, Brady T, Malani N, Wang G, et al.

Methods for integration site distribution analyses in animal cell genomes

METHODS. 2009 APR; 47 (4): 261-268

1205

7010 Nelson W, Soderlund C

Integrating sequence with FPC fingerprint maps

NUCLEIC ACIDS RESEARCH. 2009 APR; 37 (5): Art. No. e36

1206

7076 Li JZ, Chen X, Gong XL, Liu Y, Feng H, et al.

A transcript profiling approach reveals the zinc finger transcription factor ZNF191 is a pleiotropic factor

BMC GENOMICS. 2009 MAY 22; 10: Art. No. 241

1207

7125 Mazzuchelli J, Martins C

Genomic organization of repetitive DNAs in the cichlid fish Astronotus ocellatus

GENETICA. 2009 JUL; 136 (3): 461-469

1208

7133 Parmley JL, Huynen MA

Clustering of Codons with Rare Cognate tRNAs in Human Genes Suggests an Extra Level of Expression Regulation

PLOS GENETICS. 2009 JUL; 5 (7): Art. No. e1000548

1209

7150 Granzotto A, Lopes FR, Lerat E, Vieira C, Carareto CMA

The evolutionary dynamics of the Helena retrotransposon revealed by sequenced Drosophila genomes

BMC EVOLUTIONARY BIOLOGY. 2009 JUL 22; 9: Art. No. 174

1210

7169 Nikolaev SI, Deutsch S, Genolet R, Borel C, Parand L, et al.

Transcriptional and post-transcriptional profile of human chromosome 21

GENOME RESEARCH. 2009 AUG; 19 (8): 1471-1479

Date / Author / Journal

1211

Insights from genomic profiling of transcription factors

NATURE REVIEWS GENETICS. 2009 SEP; 10 (9): 605-616

1212

7251 Xiao XS, Wang ZF, Jang MY, Nutiu R, Wang ET, et al.

Splice site strength-dependent activity and genetic buffering by poly-G runs

NATURE STRUCTURAL & MOLECULAR BIOLOGY. 2009 OCT; 16 (10): 1094-U119

1213

7262 Zhou WY, Calciano MA, Jordan H, Brenner M, Johnson S, et al.

High resolution analysis of the human transcriptome: detection of extensive alternative splicing independent of transcriptional activity

BMC GENETICS. 2009 OCT 5; 10: Art. No. 63

1214

7293 Harris CR, DeWan A, Zupnick A, Normart R, Gabriel A, et al.

p53 responsive elements in human retrotransposons

ONCOGENE. 2009 NOV; 28 (44): 3857-3865

1215

7342 Li J, Han K, Xing JC, Kim HS, Rogers J, et al.

Phylogeny of the macaques (Cercopithecidae: Macaca) based on Alu elements

GENE. 2009 DEC 15; 448 (2): 242-249

1216

149 Zelenin AV, Badaeva ED, Muravenko OV

Introduction into plant genomics

MOLECULAR BIOLOGY. 2001 MAY-JUN; 35 (3): 285-293

1217

517 Scherer SW, Cheung J

Discovery of the human genome sequence in the public and private databases

CURRENT BIOLOGY. 2001 OCT 16; 11 (20): R808-R811

1218

968 Remm M, Metspalu A

High-density genotyping and linkage disequilibrium in the human genome using chromosome 22 as a model

CURRENT OPINION IN CHEMICAL BIOLOGY. 2002 FEB; 6 (1): 24-30

1219

1269 Judson R, Salisbury B, Schneider J, Windemuth A, Stephens JC

How many SNPs does a genome-wide haplotype map require?

PHARMACOGENOMICS. 2002 MAY; 3 (3): 379-391

1220

1330 [Anon]

Upstream - news in genomics

COMPARATIVE AND FUNCTIONAL GENOMICS. 2002 JUN; 3 (3): 221-225

Date / Author / Journal

LCS

GCS

LCR

1221

1389 Stahura FL, Bajorath J

Bio-and chemo-informatics beyond data management: crucial challenges and future opportunities

DRUG DISCOVERY TODAY. 2002 JUN 1; 7 (11): S41-S47

1222

1390 Duckworth DM, Sanseau P

In silico identification of novel therapeutic targets

DRUG DISCOVERY TODAY. 2002 JUN 1; 7 (11): S64-S69

1223

1532 Thomas JW, Prasad AB, Summers TJ, Lee-Lin SQ, Maduro VVB, et al.

Parallel construction of orthologous sequence-ready clone contig maps in multiple species

GENOME RESEARCH. 2002 AUG; 12 (8): 1277-1285

1224

1603 Xie HQ, Zhu W, Wasserman A, Grebinskiy V, Olson A, et al.

Computational analysis of alternative splicing using EST tissue information

GENOMICS. 2002 SEP; 80 (3): 326-330

1225

1679 Medstrand P, van de Lagemaat LN, Mager DL

Retroelement distributions in the human genome: Variations associated with age and proximity to genes

GENOME RESEARCH. 2002 OCT; 12 (10): 1483-1495

105

1226

1715 Katsanis N, Worley KC, Gonzalez G, Ansley SJ, Lupski JR

A computational/functional genomics approach for the enrichment of the retinal transcriptome and the identification of positional candidate retinopathy genes

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2002 OCT 29; 99 (22): 14326-14331

1227

1721 Bernaola-Galvan P, Carpena P, Roman-Roldan R, Oliver JL

Study of statistical correlations in DNA sequences

GENE. 2002 OCT 30; 300 (1-2): 105-115

1228

1746 Kaessmann H, Zollner S, Nekrutenko A, Li WH

Signatures of domain shuffling in the human genome

GENOME RESEARCH. 2002 NOV; 12 (11): 1642-1650

1229

1780 Koonin EV, Wolf YI, Karev GP

The structure of the protein universe and genome evolution

NATURE. 2002 NOV 14; 420 (6912): 218-223

203

1230

1803 Gibson G, Honeycutt E

The evolution of developmental regulatory pathways

CURRENT OPINION IN GENETICS & DEVELOPMENT. 2002 DEC; 12 (6): 695-700

Date / Author / Journal

LCS

GCS

LCR

1231

1829 Chelala C, Debignes MD, Imbeaud S, Zoorob R, Auffray C, et al.

Inconsistencies between maps of human chromosome 22 correlate with increased frequency of disease-related loci

JOURNAL OF BIOLOGICAL SYSTEMS. 2002 DEC; 10 (4): 303-317

1232

1911 Gentile A, D'Alessandro L, Medico E

Gene trapping: a multi-purpose tool for functional genomics

BIOTECHNOLOGY & GENETIC ENGINEERING REVIEWS, VOL 20. 2003; 20: 77-100

1233

1967 Szak ST, Pickeral OK, Landsman D, Boeke JD

GENOME BIOLOGY. 2003; 4 (5): Art. No. R30

1234

1972 Cheung J, Wilson MD, Zhang JJ, Khaja R, MacDonald JR, et al.

Recent segmental and gene duplications in the mouse genome

GENOME BIOLOGY. 2003; 4 (8): Art. No. R47

1235

2015 Robinson-Rechavi M, Laudet V

Bioinformatics of nuclear receptors

NUCELAR RECEPTORS. 2003; 364: 95-118

1236

2173 Brown JR

Ancient horizontal gene transfer

NATURE REVIEWS GENETICS. 2003 FEB; 4 (2): 121-132

110

131

1237

2256 Venter JC, Levy S, Stockwell T, Remington K, Halpern A

Massive parallelism, randomness and genomic advances

NATURE GENETICS. 2003 MAR; 33: 219-227

139

1238

2273 Paulding CA, Ruvolo M, Haber DA

The Tre2 (USP6) oncogene is a hominoid-specific gene

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 MAR 4; 100 (5): 2507-2511

1239

2287 Adams MD, Sutton GG, Smith HO, Myers EW, Venter JC

The independence of our genome assemblies

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2003 MAR 18; 100 (6): 3025-3026

1240

2295 Insel TR, Collins FS

Psychiatry in the genomics era

AMERICAN JOURNAL OF PSYCHIATRY. 2003 APR; 160 (4): 616-620

Date / Author / Journal

LCS

GCS

LCR

1241

2310 Giardine B, Elnitski L, Riemer C, Makalowska L, Schwartz S, et al.

GALA, a database for genomic sequence alignments and annotations

GENOME RESEARCH. 2003 APR; 13 (4): 732-741

1242

2331 Muller M, Kersten S

Nutrigenomics: goals and strategies

NATURE REVIEWS GENETICS. 2003 APR; 4 (4): 315-322

171

100

1243

2343 Emes RD, Goodstadt L, Winter EE, Ponting CP

Comparison of the genomes of human and mouse lays the foundation of genome zoology

HUMAN MOLECULAR GENETICS. 2003 APR 1; 12 (7): 701-709

119

1244

2352 Snyder M, Gerstein M

Genomics - Defining genes in the genomics era

SCIENCE. 2003 APR 11; 300 (5617): 258-260

1245

2389 Zhang ZL, Gerstein M

Identification and characterization of over 100 mitochondrial ribosomal protein pseudogenes in the human genome

GENOMICS. 2003 MAY; 81 (5): 468-480

1246

2393 Sverdlov ED

DNA in a cell: From a molecular icon to the problem of "what is life?"

HERALD OF THE RUSSIAN ACADEMY OF SCIENCES. 2003 MAY-JUN; 73 (3): 262-269

1247

2452 Alarcon-Riquelme ME

Functional genomics in the study of autoimmune diseases

AUTOIMMUNITY REVIEWS. 2003 JUN; 2 (4): 177-180

1248

2463 Karlin S, Mrazek J, Gentles AJ

Genome comparisons and analysis

CURRENT OPINION IN STRUCTURAL BIOLOGY. 2003 JUN; 13 (3): 344-352

1249

2483 Kawasawa Y, McKenzie LM, Hill DP, Bono H, Yanagisawa M, et al.

G protein-coupled receptor genes in the FANTOM2 database

GENOME RESEARCH. 2003 JUN; 13 (6B): 1466-1477

1250

2504 Navarro JD, Niranjan V, Peri S, Jonnalagadda CK, Pandey A

From biological databases to platforms for biomedical discovery

TRENDS IN BIOTECHNOLOGY. 2003 JUN; 21 (6): 263-268

Date / Author / Journal

LCS

GCS

LCR

1251

2516 Oduru S, Campbell JL, Karri S, Hendry WJ, Khan SA, et al.

Gene discovery in the hamster: a comparative genomics approach for gene annotation by sequencing of hamster testis cDNAs

BMC GENOMICS. 2003 JUN 3; 4: Art. No. 22

1252

2526 Bloom FE

Science as a way of life: Perplexities of a physician-scientist

SCIENCE. 2003 JUN 13; 300 (5626): 1680-1685

1253

2533 Skaletsky H, Kuroda-Kawaguchi T, Minx PJ, Cordum HS, Hillier L, et al.

The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes

NATURE. 2003 JUN 19; 423 (6942): 825-U2

506

1254

2555 Watkins WS, Rogers AR, Ostler CT, Wooding S, Bamshad MJ, et al.

Genetic variation among world populations: Inferences from 100 Alu insertion polymorphisms

GENOME RESEARCH. 2003 JUL; 13 (7): 1607-1618

1255

2557 Bouneau L, Fischer C, Ozouf-Costaz C, Froschauer A, Jaillon O, et al.

An active non-LTR retrotransposon with tandem structure in the compact genome of the pufferfish Tetraodon nigroviridis

GENOME RESEARCH. 2003 JUL; 13 (7): 1686-1695

1256

2630 Oliver C, Douady CJ, Carels N, Hughes S, Bucciarelli G, et al.

Using analytical ultracentrifugation to study compositional variation in vertebrate genomes

EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS. 2003 AUG; 32 (5): 418-426

1257

2641 Larkin DM, Everts-van der Wind A, Rebeiz M, Schweitzer PA, Bachman S, et al.

A cattle-human comparative map built with cattle BAC-ends and human genome sequence

GENOME RESEARCH. 2003 AUG; 13 (8): 1966-1972

1258

2656 Vienne A, Rasmussen J, Abi-Rached L, Pontarotti P, Gilles A

Systematic phylogenomic evidence of en bloc duplication of the ancestral 8p11.21-8p21.3-like region

MOLECULAR BIOLOGY AND EVOLUTION. 2003 AUG; 20 (8): 1290-1298

1259

2714 Huntley D, Hummerich H, Smedley D, Kittivoravitkul S, McCarthy M, et al.

GANESH: Software for customized annotation of genome regions

GENOME RESEARCH. 2003 SEP; 13 (9): 2195-2202

1260

2737 Ho, ehe MR

Haplotypes and the systematic analysis of genetic variation in genes and genomes

PHARMACOGENOMICS. 2003 SEP; 4 (5): 547-570

106

Date / Author / Journal

LCS

GCS

LCR

1261

2805 Ge H, Walhout AJM, Vidal M

Integrating 'omic' information: a bridge between genomics and systems biology

TRENDS IN GENETICS. 2003 OCT; 19 (10): 551-560

160

1262

2879 Wen SY, Zhang CT

Identification of isochore boundaries in the human genome using the technique of wavelet multiresolution analysis

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2003 NOV 7; 311 (1): 215-222

1263

2906 Carlton JM

Genome sequencing and comparative genomics of tropical disease pathogens

CELLULAR MICROBIOLOGY. 2003 DEC; 5 (12): 861-873

1264

2913 Swanson WJ

Adaptive evolution of genes and gene families

CURRENT OPINION IN GENETICS & DEVELOPMENT. 2003 DEC; 13 (6): 617-622

1265

2928 Xie T, Rowen L, Aguado B, Ahearn ME, Madan A, et al.

Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse

GENOME RESEARCH. 2003 DEC; 13 (12): 2621-2636

1266

2937 Cardazzo B, Bargelloni L, Toffolatti L, Patarnello T

Intervening sequences in paralogous genes: A comparative genomic approach to study the evolution of X chromosome introns

MOLECULAR BIOLOGY AND EVOLUTION. 2003 DEC; 20 (12): 2034-2041

1267

2950 Brown D, Superti-Furga G

Rediscovering the sweet spot in drug discovery

DRUG DISCOVERY TODAY. 2003 DEC 1; 8 (23): 1067-1077

1268

2999 Gladyshev VN, Kryukov GV, Fomenko DE, Hatfield DL

Identification of trace element - Containing proteins in genomic databases

ANNUAL REVIEW OF NUTRITION. 2004; 24: 579-596

1269

3009 Oiwa NN, Glazier JA

Self-similar mitochondrial DNA

CELL BIOCHEMISTRY AND BIOPHYSICS. 2004; 41 (1): 41-62

1270

3038 Bostanci A

Sequencing human genomes

FROM MOLECULAR GENETICS TO GENOMICS. 2004; 20: 158-179

Date / Author / Journal

LCS

GCS

LCR

1271

3046 Hillman RT, Green RE, Brenner SE

An unappreciated role for RNA surveillance

GENOME BIOLOGY. 2004; 5 (2): Art. No. R8

1272

3055 Huang H, Winter EE, Wang HJ, Weinstock KG, Xing HM, et al.

Evolutionary conservation and selection of human disease gene orthologs in the rat and mouse genomes

GENOME BIOLOGY. 2004; 5 (7): Art. No. R47

1273

3077 Druker R, Whitelaw E

Retrotransposon-derived elements in the mammalian genome: A potential source of disease

JOURNAL OF INHERITED METABOLIC DISEASE. 2004; 27 (3): 319-330

1274

3129 Jekosch K

The zebrafish genome project: Sequence analysis and annotation

ZEBRAFISH:2ND EDITION GENETICS GENOMICS AND INFORMATICS. 2004; 77: 225-239

1275

3138 Branda CS, Dymecki SM

Talking about a revolution: The impact of site-specific recombinases on genetic analyses in mice

DEVELOPMENTAL CELL. 2004 JAN; 6 (1): 7-28

208

198

1276

3181 Furano AV, Duvernell DD, Boissinot S

L1 (LINE-1) retrotransposon diversity differs dramatically between mammals and fish

TRENDS IN GENETICS. 2004 JAN; 20 (1): 9-14

1277

3190 Thanaraj TA, Stamm S, Clark F, Riethoven JJ, Le Texier V, et al.

ASD: the Alternative Splicing Database

NUCLEIC ACIDS RESEARCH. 2004 JAN 1; 32: D64-D69

109

1278

3194 Kikuno R, Nagase T, Nakayama M, Koga H, Okazaki N, et al.

HUGE: a database for human KIAA proteins, a 2004 update integrating HUGEppi and ROUGE

NUCLEIC ACIDS RESEARCH. 2004 JAN 1; 32: D502-D504

1279

3242 Hesse M, Zimek A, Weber K, Magin TM

Comprehensive analysis of keratin gene clusters in humans and rodents

EUROPEAN JOURNAL OF CELL BIOLOGY. 2004 FEB; 83 (1): 19-26

1280

3245 Chapman MA, Donaldson IJ, Gilbert J, Grafham D, Rogers J, et al.

Analysis of multiple genomic sequence alignments: A web resource, online tools, and lessons learned from analysis of mammalian SCL loci

GENOME RESEARCH. 2004 FEB; 14 (2): 313-318

Date / Author / Journal

1281

The role of emerging genomics and proteomics technologies in cancer drug target discovery

CURRENT CANCER DRUG TARGETS. 2004 MAR; 4 (2): 111-124

1282

3360 Wu JQ, Garcia AM, Hulyk S, Sneed A, Kowis C, et al.

Large-scale RT-PCR recovery of full-length cDNA clones

BIOTECHNIQUES. 2004 APR; 36 (4): 690-+

1283

3394 Bredel M, Jacoby E

Chemogenomics: An emerging strategy for rapid target and drug discovery

NATURE REVIEWS GENETICS. 2004 APR; 5 (4): 262-275

144

1284

3408 Hayashizaki Y, Kanamori M

Dynamic transcriptome of mice

TRENDS IN BIOTECHNOLOGY. 2004 APR; 22 (4): 161-167

1285

3423 Hui LJ, Zhang X, Wu X, Lin ZX, Wang QK, et al.

Identification of alternatively spliced mRNA variants related to cancers by genome-wide ESTs alignment

ONCOGENE. 2004 APR 15; 23 (17): 3013-3023

1286

3426 Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, et al.

A gene atlas of the mouse and human protein-encoding transcriptomes

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 APR 20; 101 (16): 6062-6067

820

1287

3433 Wang E, Ding YC, Flodman P, Kidd JR, Kidd KK, et al.

The genetic architecture of selection at the human dopamine receptor D4 (DRD4) gene locus

AMERICAN JOURNAL OF HUMAN GENETICS. 2004 MAY; 74 (5): 931-944

1288

3445 Dermitzakis ET, Kirkness E, Schwarz S, Birney E, Reymond A, et al.

Comparison of human chromosome 21 conserved nongenic sequences (CNGs) with the mouse and dog genomes shows that their selective constraint is independent of their genic environment

GENOME RESEARCH. 2004 MAY; 14 (5): 852-859

1289

3447 Searle SMJ, Gilbert J, Iyer V, Clamp M

The Otter annotation system

GENOME RESEARCH. 2004 MAY; 14 (5): 963-970

1290

3464 Tefferi A, Spelsberg TC

Primer on medical genomics - The end of the beginning

MAYO CLINIC PROCEEDINGS. 2004 MAY; 79 (5): 659-660

Date / Author / Journal

LCS

GCS

LCR

1291

3468 Borgono CA, Michael IP, Diamandis EP

Human tissue kallikreins: Physiologic roles and applications in cancer

MOLECULAR CANCER RESEARCH. 2004 MAY; 2 (5): 257-280

134

402

1292

3476 Pagani F, Baralle FE

Genomic variants in exons and introns: identifying the splicing spoilers

NATURE REVIEWS GENETICS. 2004 MAY; 5 (5): 389-U2

152

1293

3485 Galante PAF, Sakabe NJ, Kirschbaum-Slager N, De Souza SJ

Detection and evaluation of intron retention events in the human transcriptome

RNA-A PUBLICATION OF THE RNA SOCIETY. 2004 MAY; 10 (5): 757-765

1294

3574 Gibbons R, Dugaiczyk LJ, Girke T, Duistermars B, Zielinski R, et al.

Distinguishing humans from great apes with AluYb8 repeats

JOURNAL OF MOLECULAR BIOLOGY. 2004 JUN 11; 339 (4): 721-729

1295

3614 Kudla G, Helwak A, Lipinski L

Gene conversion and GC-content evolution in mammalian Hsp70

MOLECULAR BIOLOGY AND EVOLUTION. 2004 JUL; 21 (7): 1438-1444

1296

3616 Hughes AL, Friedman R

Pattern of divergence of amino acid sequences encoded by paralogous genes in human and pufferfish

MOLECULAR PHYLOGENETICS AND EVOLUTION. 2004 JUL; 32 (1): 337-343

1297

3633 Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, et al.

Genome evolution in yeasts

NATURE. 2004 JUL 1; 430 (6995): 35-44

428

1298

3667 Clark KJ, Geurts AM, Bell JB, Hackett PB

Transposon vectors for gene-trap insertional mutagenesis in vertebrates

GENESIS. 2004 AUG; 39 (4): 225-233

1299

3670 Emes RD, Riley MC, Laukaitis CM, Goodstadt L, Karn RC, et al.

Comparative evolutionary genomics of androgen-binding protein genes

GENOME RESEARCH. 2004 AUG; 14 (8): 1516-1529

1300

3704 Caenepeel S, Charydczak G, Sudarsanam S, Hunter T, Manning G

The mouse kinome: Discovery and comparative genomics of all mouse protein kinases

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2004 AUG 10; 101 (32): 11707-11712

Initial sequencing and analysis of the human genome (Lander) The papers citing Lander ES, et al. "Initial sequencing and analysis of the human genome." NATURE. 2001 FEB 15; 409 (6822): 860-921	Historiographs	Glossary HistCite Guide About Grand Totals: LCS 38623, GCS 253809, CR 422506 Collection span: 2000 - 2010
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