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Mon May 15 16:10:09 2006

Papers by DE Koshland
and the papers citing DE Koshland

Nodes: 18789, Authors: 32142, Journals: 2179, Outer References: 517928, Words: 22058
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Collection span: 1949 - 2006
View: Overview   Sorted by year, source, volume, issue, page.

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#LCRNCRNode / Date / Journal / AuthorLCSGCS
18601233918601 2005 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 102 (43): 15623-15628
Studdert CA; Parkinson JS
Insights into the organization and dynamics of bacterial chemoreceptor clusters through in vivo crosslinking studies
11
1860284118602 2005 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 102 (52): 18908-18913
Tobi D; Bahar I
Structural changes involved in protein binding correlate with intrinsic motions of proteins in the unbound state
01
1860367318603 2005 PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY 89 (1): 9-35
Ponstingl H; Thomas KB; Gorse D; Thornton JM
Morphological aspects of oligorneric protein structures
03
1860453318604 2005 PROTEIN ENGINEERING DESIGN & SELECTION 18 (8): 359-364
Ostermeier M
Engineering allosteric protein switches by domain insertion
03
18605273918605 2005 PROTEIN JOURNAL 24 (5): 259-266
Rodriguez-Arnedo A; Camacho M; Llorca F; Bonete MJ
Complete reversal of coenzyme specificity of isocitrate dehydrogenase from Haloferax volcanii
00
1860613718606 2005 PROTEIN JOURNAL 24 (7-8): 455-463
Wong DWS; Batt SB; Lee CC; Wagschal K; Robertson GH
Characterization of active Lentinula edodes glucoamylase expressed and secreted by Saccharomyces cerevisiae
00
1860743418607 2005 PROTEIN SCIENCE 14 (1): 81-88
Wildes D; Marqusee S
Hydrogen exchange and ligand binding: Ligand-dependent and ligand-independent protection in the Src SH3 domain
01
18608192718608 2005 PROTEIN SCIENCE 14 (1): 140-147
Kim TK; Colman RF
Ser(95), Asn(97), and Thr(78) are important for the catalytic function of porcine NADP-dependent isocitrate dehydrogenase
11
1860924818609 2005 PROTEIN SCIENCE 14 (6): 1485-1497
Couture JF; De Jesus-Tran KP; Roy AM; Cantin L; Cote PL; et al.
Comparison of crystal structures of human type 3 3 alpha-hydroxysteroid dehydrogenase reveals an "induced-fit" mechanism and a conserved basic motif involved in the binding of androgen
00
1861045618610 2005 PROTEIN SCIENCE 14 (8): 2059-2068
Jager M; Michalet X; Weiss S
Protein-protein interactions as a tool for site-specific labeling of proteins
12
#LCRNCRNode / Date / Journal / AuthorLCSGCS
1861175418611 2005 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 59 (1): 118-130
Bottoni A; Miscione GP; De Vivo M
A theoretical DFT investigation of the lysozyme mechanism: Computational evidence for a covalent intermediate pathway
00
1861212518612 2005 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 59 (3): 555-564
Dolk E; van Vliet C; Perez JMJ; Vriend G; Darbon H; et al.
Induced refolding of a temperature denatured llama heavy-chain antibody fragment by its antigen
02
1861383918613 2005 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 59 (4): 697-707
Ming DM; Wall ME
Quantifying allosteric effects in proteins
14
1861444518614 2005 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 61 (2): 227-238
Jedrzejas MJ; Stern R
Structures of vertebrate hyaluronidases and their unique enzymatic mechanism of hydrolysis
11
1861572418615 2005 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 61 (3): 590-596
Mulakala C; Reilly PJ
Force calculations in automated docking: Enzyme-substrate interactions in Fusarium oxysporum Cel7B
00
1861623918616 2005 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 61 (3): 642-648
Silva LP; Azevedo RB; Morais PC; Ventura MM; Freitas SM
Oligomerization states of Bowman-Birk inhibitor by atomic force microscopy and computational approaches
00
1861772318617 2005 PURE AND APPLIED CHEMISTRY 77 (11): 1873-1886
Menger FM
An alternative view of enzyme catalysis
00
1861847118618 2005 QUIMICA NOVA 28 (1): 95-102
Verli H; Barreiro EJ
A medicinal chemistry paradigm: Ligands and receptor flexibility.
00
1861922018619 2005 RADIATION RESEARCH 163 (3): 337-342
Miller JH; Zheng F; Jin S; Opresko LK; Wiley HS; et al.
A model of cytokine shedding induced by low doses of gamma radiation
01
18620216618620 2005 SCHIZOPHRENIA RESEARCH 78 (1): 69-86
Bernstein HG; Bogerts B; Keilhoff G
The many faces of nitric oxide in schizophrenia. A review
00
#LCRNCRNode / Date / Journal / AuthorLCSGCS
18621143218621 2005 SCIENCE 307 (5713): 1279-1282
Zhu GP; Golding GB; Dean AM
The selective cause of an ancient adaptation
38
1862282918622 2005 SCIENCE 307 (5717): 1962-1965
Rosenfeld N; Young JW; Alon U; Swain PS; Elowitz MB
Gene regulation at the single-cell level
237
1862371818623 2005 SCIENCE 307 (5717): 1965-1969
Pedraza JM; van Oudenaarden A
Noise propagation in gene networks
229
1862432318624 2005 SCIENCE 308 (5725): 1178-1180
Cochella L; Green R
An active role for tRNA in decoding beyond codon : anticodon pairing
011
18625143718625 2005 SCIENCE 308 (5727): 1424-1428
Changeux JP; Edelstein SJ
Allosteric mechanisms of signal transduction
113
1862652818626 2005 SCIENCE 310 (5747): 499-501
Lunzer M; Milter SP; Felsheim R; Dean AM
The biochemical architecture of an ancient adaptive landscape
03
1862751518627 2005 SEIKAGAKU 77 (7): 649-655
Yamashita A
Time-resolved X-ray crystallographic analysis on tropinone reductase-II using Laue diffraction method
00
1862825118628 2005 SENSORS AND ACTUATORS B-CHEMICAL 107 (1): 14-23
Dacres H; Narayanaswamy R
Sensitive optical NO sensor based on bis[(2,9-dimethyl-1,10-phenanthroline)] copper(II) complex
00
18629174318629 2005 SIAM JOURNAL ON APPLIED MATHEMATICS 65 (2): 361-391
Erban R; Othmer HG
From individual to collective behavior in bacterial chemotaxis
00
1863022318630 2005 SOUTHERN MEDICAL JOURNAL 98 (9): 946-949
Otrock ZK; Mahfouz RAR; Salem ZM
Four primary tumors of lung, bladder, prostate, and breast in a male patient
00
#LCRNCRNode / Date / Journal / AuthorLCSGCS
1863124718631 2005 STRUCTURE 13 (10): 1511-1520
Zheng JM; Singh VK; Jia ZC
Identification of an ITPase/XTPase in Escherichia coli by structural and biochemical analysis
01
1863243918632 2005 STRUCTURE 13 (11): 1715-1723
Banavali NK; Roux B
The N-terminal end of the catalytic domain of Src kinase Hck is a conformational switch implicated in long-range allosteric regulation
00
1863358318633 2005 SYSTEMS BIOLOGY 2 (1): 43-52
Mayya V; Loew LM
STAT module can function as a biphasic amplitude filter
00
1863433818634 2005 TETRAHEDRON 61 (24): 5849-5854
Kantevari S; Narasimahji CV; Mereyala HB
Bis(4,5-dimethoxy-2-nitrophenyl)ethylene glycol: a new and efficient photolabile protecting group for aldehydes and ketones
01
1863513718635 2005 TETRAHEDRON LETTERS 46 (32): 5293-5295
Acharya J; Gupta AK; Shakya PD; Kaushik MP
Trichloroisocyanuric acid: an efficient reagent for the synthesis of dialkyl chlorophosphates from dialkyl phosphites
00
1863622718636 2005 TETRAHEDRON-ASYMMETRY 16 (1): 25-32
Kuntz DA; Ghavami A; Johnston BD; Pinto BM; Rose DR
Crystallographic analysis of the interactions of Drosophila melanogaster Golgi alpha-mannosidase II with the naturally occurring glycomimetic salacinol and its analogues
06
1863774318637 2005 THERMOCHIMICA ACTA 431 (1-2): 9-20
Karim N; Okada H; Kidokoro S
Calorimetric evaluation of the activity and the mechanism of cellulases for the hydrolysis of cello-oligosaccharides accompanied by the mutarotation reaction of the hydrolyzed products
00
18638149718638 2005 TOXIN REVIEWS 24 (1): 15-41
Changeux JP
The visit of Professor Chen-Yuan Lee to the Pasteur Institute in 1970 and the use of a snake venom toxin to identify the acetylcholine receptor protein
00
18639115618639 2005 TRAFFIC 6 (11): 1036-1046
Sciambi CJ; Komma DJ; Skold HN; Hirose K; Endow SA
A bidirectional kinesin motor in live Drosophila embryos
00
1864035118640 2005 TRENDS IN BIOCHEMICAL SCIENCES 30 (4): 188-193
Agnati LF; Fuxe K; Ferre S
How receptor mosaics decode transmitter signals. Possible relevance of cooperativity
27
#LCRNCRNode / Date / Journal / AuthorLCSGCS
1864143918641 2005 TRENDS IN BIOCHEMICAL SCIENCES 30 (9): 490-497
Jaffe EK
Morpheeins - a new structural paradigm for allosteric regulation
01
1864253618642 2005 TRENDS IN BIOTECHNOLOGY 23 (5): 231-237
Morley KL; Kazlauskas RJ
Improving enzyme properties: when are closer mutations better?
06
1864341318643 2005 TRENDS IN GENETICS 21 (1): 33-35
Veitia RA
Gene dosage balance: deletions, duplications and dominance
03
18644146318644 2005 TRENDS IN MICROBIOLOGY 13 (4): 152-158
Hellingwerf KJ
Bacterial observations: a rudimentary form of intelligence?
03
18645127018645 2005 TRENDS IN MOLECULAR MEDICINE 11 (8): 382-389
Pages JM; Masi M; Barbe J
Inhibitors of efflux pumps in Gram-negative bacteria
24
18646115518646 2005 TRENDS IN PHARMACOLOGICAL SCIENCES 26 (4): 183-189
Klein-Seetharaman J
Dual role of interactions between membranous and soluble portions of helical membrane receptors for folding and signaling
13
18647031718647 2005 VITAMINS AND HORMONES - ADVANCES IN RESEARCH AND APPLICATIONS, VOL 71 71: 263-299
Lardy H; Marwah A; Marwah P
C-19-5-ene steroids in nature
00
1864819918648 2005 ZHURNAL VYSSHEI NERVNOI DEYATELNOSTI IMENI I P PAVLOVA 55 (6): 842-860
Alexandrov YI
Learning and memory: Traditional and systemic approach
00
18649153618649 2006 ACTA BIOCHIMICA ET BIOPHYSICA SINICA 38 (2): 79-88
Li ZH; Dong K; Sun JC; Yuan JP; Hu BY; et al.
Characterization of cheW genes of Leptospira interrogans and their effects in Escherichia coli
00
18650420318650 2006 ACTA BIOCHIMICA POLONICA 53 (1): 11-32
Ciesla J
Metabolic enzymes that bind RNA: yet another level of cellular regulatory network?
00
#LCRNCRNode / Date / Journal / AuthorLCSGCS
1865114218651 2006 ANALYTICAL BIOCHEMISTRY 349 (1): 148-155
Elphick LM; Meinander A; Mikhailov A; Richard M; Toms NJ; et al.
Live cell detection of caspase-3 activation by a Discosoma-red-fluorescent-protein-based fluorescence resonance energy transfer construct
00
1865223318652 2006 ANALYTICAL CHEMISTRY 78 (7): 2093-2099
Berthod A
Chiral recognition mechanisms
00
186532626118653 2006 ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 45 (15): 2348-2368
Kiessling LL; Gestwicki JE; Strong LE
Synthetic multivalent ligands as probes of signal transduction
00
1865413118654 2006 ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 45 (15): 2469-2472
Wombacher R; Keiper S; Suhm S; Serganov A; Patel DJ; et al.
Control of stereoselectivity in an enzymatic reaction by backdoor access
00
18655718518655 2006 ANNUAL REVIEW OF PHARMACOLOGY AND TOXICOLOGY 46: 481-519
Schwartz TW; Frimurer TM; Holst B; Rosenkilde MM; Elling CE
Molecular mechanism of 7TM receptor activation - A global toggle switch model
01
1865613618656 2006 APPLIED AND ENVIRONMENTAL MICROBIOLOGY 72 (4): 2322-2330
Frigon D; Muyzer G; van Loosdrecht M; Raskin L
rRNA and poly-beta-hydroxybutyrate dynamics in bioreactors subjected to feast and famine cycles
00
1865744918657 2006 ARCHIVES OF MICROBIOLOGY 185 (2): 136-146
Blencke HM; Reif I; Commichau FM; Detsch C; Wacker I; et al.
Regulation of citB expression in Bacillus subtilis: integration of multiple metabolic signals in the citrate pool and by the general nitrogen regulatory system
00
1865833618658 2006 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 342 (1): 86-91
Schubert D; Dargusch R; Raitano J; Chan SW
Cerium and yttrium oxide nanoparticles are neuroprotective
00
186591611418659 2006 BIOCHEMICAL PHARMACOLOGY 71 (7): 910-918
Lomovskaya O; Bostian KA
Practical applications and feasibility of efflux pump inhibitors in the clinic - A vision for applied use
00
1866027918660 2006 BIOCHEMICAL PHARMACOLOGY 71 (7): 1048-1056
Schmid MB
Crystallizing new approaches for antimicrobial drug discovery
00
#LCRNCRNode / Date / Journal / AuthorLCSGCS
18661103218661 2006 BIOCHEMISTRY 45 (2): 571-580
Yip VLY; Withers SG
Mechanistic analysis of the unusual redox-elimination sequence employed by Thermotoga maritima BgIT: A 6-phospho-beta-glucosidase from glycoside hydrolase family 4
00
1866265818662 2006 BIOCHEMISTRY 45 (7): 2114-2121
Fodor K; Harmat V; Neutze R; Szilagyi L; Graf L; et al.
Enzyme : Substrate hydrogen bond shortening during the acylation phase of serine protease catalysis
00
1866336318663 2006 BIOCHEMISTRY 45 (9): 3020-3032
Gatlik-Landwojtowicz E; Aanismaa P; Seelig A
Quantification and characterization of P-glycoprotein-substrate interactions
00
1866465918664 2006 BIOCHEMISTRY 45 (11): 3733-3739
Chefalo P; Pan YB; Nagy N; Guo ZW; Harding CV
Efficient metabolic engineering, of GM3 on tumor cells by N-phenylacetyl-D-mannosamine
00
1866545018665 2006 BIOCHEMISTRY 45 (13): 4173-4181
Zhang YH; Shin YK
Transmembrane organization of yeast syntaxin-analogue Sso1p
00
1866676218666 2006 BIOCHEMISTRY 45 (15): 4797-4807
De Vos D; Collins T; Nerinckx W; Savvides SN; Claeyssens M; et al.
Oligosaccharide binding in family 8 glycosidases: Crystal structures of active-site mutants of the beta-1,4-xylanase pXyl from Pseudoaltermonas haloplanktis TAH3a in complex with substrate and product
00
18667225918667 2006 BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 1764 (2): 199-210
MacLeod TJ; Lunn FA; Bearne SL
The role of lysine residues 297 and 306 in nucleoside triphosphate regulation of E-coli CTP synthase: Inactivation by 2 ',3 '-dialdehyde ATP and mutational analyses
00
1866834518668 2006 BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 1764 (2): 285-291
Fang YN; Tong GC; Means GE
Structural changes accompanying human serum albumin's binding of fatty acids are concerted
00
186697610518669 2006 BIOESSAYS 28 (1): 9-22
Baker MD; Wolanin PM; Stock JB
Signal transduction in bacterial chemotaxis
00
1867032418670 2006 BIOESSAYS 28 (3): 282-289
Veitia RA; Nijhout HF
The robustness of transcriptional response to alterations in morphogenetic gradients
00
#LCRNCRNode / Date / Journal / AuthorLCSGCS
1867133918671 2006 BIOINFORMATICS 22 (3): 346-353
Vallabhajosyula RR; Chickarmane V; Sauro HM
Conservation analysis of large biochemical networks
00
18672411118672 2006 BIOLOGICAL RESEARCH FOR NURSING 7 (4): 241-255
Choi J; Hoffman LA; Rodway GW; Sethi JM
Markers of lung disease in exhaled breath: Nitric oxide
00
1867388218673 2006 BIOPHYSICAL JOURNAL 90 (1): 42-56
Benitez BAS; Arora K; Schlick T
In silico studies of the African swine fever virus DNA polymerase X support an induced-fit mechanism
00
1867465018674 2006 BIOPHYSICAL JOURNAL 90 (1): 340-356
Hustedt EJ; Stein RA; Sethaphong L; Brandon S; Zhou Z; et al.
Dipolar coupling between nitroxide spin labels: The development and application of a tether-in-a-cone model
00
1867513518675 2006 BIOPHYSICAL JOURNAL 90 (4): 1396-1410
Swift JL; Heuff R; Cramb DT
A two-photon excitation fluorescence cross-correlation assay for a model ligand-receptor binding system using quantum dots
00
1867663618676 2006 BIOPHYSICAL JOURNAL 90 (9): 3315-3321
Le TT; Emonet T; Harlepp S; Guet CC; Cluzel P
Dynamical determinants of drug-inducible gene expression in a single bacterium
00
18677107418677 2006 BIOSYSTEMS 83 (2-3): 81-90
Hornberg JJ; Bruggeman FJ; Westerhoff HV; Lankelma J
Cancer: A systems biology disease
00
18678133618678 2006 BIOSYSTEMS 83 (2-3): 195-206
Salazar C; Hofer T
Kinetic models of phosphorylation cycles: A systematic approach using the rapid-equilibrium approximation for protein-protein interactions
00
1867966018679 2006 BIOTECHNOLOGY ADVANCES 24 (1): 80-85
Norouzian D; Akbarzadeh A; Scharer JM; Young MM
Fungal glucoamylases
00
18680184618680 2006 BIOTECHNOLOGY AND BIOENGINEERING 93 (3): 457-464
Law AMJ; Aitken MD
The effect of oxygen on chemotaxis to naphthalene by Pseudomonas putida G7
00
#LCRNCRNode / Date / Journal / AuthorLCSGCS
1868133718681 2006 BIOTECHNOLOGY PROGRESS 22 (1): 14-23
Doke AM; Sadana A
Detection of glucose and related analytes by biosensors: A fractal analysis
00
1868255118682 2006 BMC CELL BIOLOGY 7: Art. No. 11
Chang HH; Oh PY; Ingber DE; Huang S
Multistable and multistep dynamics in neutrophil differentiation
00
1868373518683 2006 BRITISH JOURNAL OF PHARMACOLOGY 147 (7): 808-814
Popa MO; Lerche H
Cu2+(1,10 phenanthroline)(3) is an open-channel blocker of the human skeletal muscle sodium channel
00
1868412618684 2006 CHEMICAL COMMUNICATIONS (6): 629-631
Chang KH; Lee L; Chen J; Li WS
Lithocholic acid analogues, new and potent alpha-2,3-sialyltransferase inhibitors
00
1868552918685 2006 CHEMICAL PHYSICS LETTERS 418 (4-6): 544-548
Wang J
Diffusion and single molecule dynamics on biomolecular interface binding energy landscape
00
186861015618686 2006 CHEMICAL REVIEWS 106 (3): 818-839
Stern R; Jedrzejas MJ
Hyaluronidases: Their genomics, structures, and mechanisms of action
00
18687228618687 2006 CHEMICO-BIOLOGICAL INTERACTIONS 160 (1): 1-40
Valko M; Rhodes CJ; Moncol J; Izakovic M; Mazur M
Free radicals, metals and antioxidants in oxidative stress-induced cancer
01
1868832618688 2006 CHEMISTRY & BIODIVERSITY 3 (3): 245-273
Bojarski AJ; Nowak M; Testa B
Conformational fluctuations versus constraints in amino acid side chains: The evolution of information content from free amino acids to proteins
00
18689321518689 2006 COGNITIVE SCIENCE 30 (1): 3-41
Hills TT
Animal foraging and the evolution of goal-directed cognition
00
1869082018690 2006 CURRENT BIOLOGY 16 (6): R214-R216
Cassimeris L
Mitosis: Riding the protofilament curl
00
#LCRNCRNode / Date / Journal / AuthorLCSGCS
1869192618691 2006 CURRENT MICROBIOLOGY 52 (1): 21-26
Jung IL; Kim SK; Kim IG
The RpoS-mediated regulation of isocitrate dehydrogenase gene expression in Escherichia coli
00
1869264918692 2006 CURRENT OPINION IN CHEMICAL BIOLOGY 10 (1): 81-87
Araujo RP; Liotta LA
A control theoretic paradigm for cell signaling networks: a simple complexity for a sensitive robustness
00
1869324318693 2006 CURRENT OPINION IN MICROBIOLOGY 9 (1): 117-122
Boyce JD; Adler B
How does Pasteurella multocida respond to the host environment?
00
18694811118694 2006 CURRENT PROTEIN & PEPTIDE SCIENCE 7 (1): 3-15
Agnati LF; Zunarelli E; Genedani S; Fuxe K
On the existence of a global molecular network enmeshing the whole central nervous system: Physiological and pathological implications
00
1869559418695 2006 DEVELOPMENT 133 (3): 385-394
Ashe HL; Briscoe J
The interpretation of morphogen gradients
00
1869621018696 2006 DNA REPAIR 5 (3): 291-293
Friedberg EC
Fraud in science - Reflections on some whys and wherefores
00
1869743318697 2006 ENZYME AND MICROBIAL TECHNOLOGY 38 (3-4): 512-520
Peng LF; Shimizu K
Effect of fadR gene knockout on the metabolism of Escherichia coli based on analyses of protein expressions, enzyme activities and intracellular metabolite concentrations
00
1869852718698 2006 ENZYME AND MICROBIAL TECHNOLOGY 38 (6): 795-802
Sacchi S; Boselli A; Job V; Pilone MS; Pollegioni L; et al.
The role of tyrosines 223 and 238 in Rhodotorula gracilis D-amino acid oxidase catalysis: Interpretation of double mutations
00
1869988318699 2006 EUROPEAN JOURNAL OF PHARMACEUTICAL SCIENCES 27 (5): 392-400
Ambudkar SV; Kim IW; Sauna ZE
The power of the pump: Mechanisms of action of P-glycoprotein (ABCB1)
00
1870011318700 2006 EXPERIMENTAL PARASITOLOGY 112 (3): 152-157
Barros VC; Oliveira JS; Melo MN; Gontijo NF
Leishmania amazonensis: Chemotaxic and osmotaxic responses in promastigotes and their probable role in development in the phlebotomine gut
00

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