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Mon Oct 16 13:32:02 2006
RD Kornberg
Papers by RD Kornberg
and the papers citing RD Kornberg
Nodes: 12675, Authors: 23227, Journals: 1244, Cited References: 249813, Words: 13582, Tags: 1
Yearly outputDocument TypeLanguageInstitutionInstitution with SubdivisionCountry
Collection span: 1965 - 2006
View: Overview   Sorted by LCR.

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#LCRNCRNode / Date / Author / JournalLCSGCS
101651048186 1998 Wu SY; Kershnar E; Chiang CM
TAF(II)-independent activation mediated by human TBP in the presence of the positive cofactor PC4
EMBO JOURNAL 17 (15): 4478-4490
2437
10264826320 1995 Planta RJ; Goncalves PM; Mager WH
Global regulators of ribosome biosynthesis in yeast
BIOCHEMISTRY AND CELL BIOLOGY-BIOCHIMIE ET BIOLOGIE CELLULAIRE 73 (11-12): 825-834
1028
10364998847 1999 Wu SY; Thomas MC; Hou SY; Likhite V; Chiang CM
Isolation of mouse TFIID and functional characterization of TBP and TFIID in mediating estrogen receptor and chromatin transcription
JOURNAL OF BIOLOGICAL CHEMISTRY 274 (33): 23480-23490
825
1046416510772 2003 Shilatifard A; Conaway RC; Conaway JW
The RNA polymerase II elongation complex
ANNUAL REVIEW OF BIOCHEMISTRY 72: 693-715
3469
105631274867 1992 KORNBERG RD; LORCH Y
CHROMATIN STRUCTURE AND TRANSCRIPTION
ANNUAL REVIEW OF CELL BIOLOGY 8: 563-687
176176
106631506869 1996 Burley SK; Roeder RG
Biochemistry and structural biology of transcription factor IID (TFIID)
ANNUAL REVIEW OF BIOCHEMISTRY 65: 769-799
168440
107631658227 1998 Lee TI; Young RA
Regulation of gene expression by TBP-associated proteins
GENES & DEVELOPMENT 12 (10): 1398-1408
50126
108631828741 1999 Thoma F
Light and dark in chromatin repair: repair of UV-induced DNA lesions by photolyase and nucleotide excision repair
EMBO JOURNAL 18 (23): 6585-6598
20103
109631118885 1999 Muchardt C; Yaniv M
ATP-dependent chromatin remodelling: SWI/SNF and Co. are on the job
JOURNAL OF MOLECULAR BIOLOGY 293 (2): 187-198
3391
11063889116 2000 Myers LC; Kornberg RD
Mediator of transcriptional regulation
ANNUAL REVIEW OF BIOCHEMISTRY 69: 729-749
172172
#LCRNCRNode / Date / Author / JournalLCSGCS
1116324410771 2003 Rusche LN; Kirchmaier AL; Rine J
The establishment, inheritance, and function of silenced chromatin in Saccharomyces cerevisiae
ANNUAL REVIEW OF BIOCHEMISTRY 72: 481-516
17128
1126336812373 2006 Gillet LCJ; Scharer OD
Molecular mechanisms of mammalian global genome nucleotide excision repair
CHEMICAL REVIEWS 106 (2): 253-276
01
113621181230 1978 FELSENFELD G
CHROMATIN
NATURE 271 (5641): 115-122
406646
114621158140 1998 Shen WC; Apone LM; Virbasius CMA; Li XY; Monsalve M; et al.
Functional analysis of TFIID components
COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY 63: 219-227
12
115626418398 1998 Mendenhall MD; Hodge AE
Regulation of cdc28 cyclin-dependent protein kinase activity during the cell cycle of the yeast Saccharomyces cerevisiae
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS 62 (4): 1191-+
8116
116622259272 2000 Annunziato AT; Hansen JC
Role of histone acetylation in the assembly and modulation of chromatin structures
GENE EXPRESSION 9 (1-2): 37-61
955
1176215010137 2001 Urnov FD; Wolffe AP
Chromatin remodeling and transcriptional activation: the cast (in order of appearance)
ONCOGENE 20 (24): 2991-3006
1472
1186217112315 2005 Aoyagi S; Trotter KW; Archer TK
ATP-dependent chromatin remodeling complexes and their role in nuclear receptor-dependent transcription in vivo
VITAMINS AND HORMONES 70: 281-307
13
1196112410925 2003 Mangus DA; Evans MC; Jacobson A
Poly(A)-binding proteins: multifunctional scaffolds for the post-transcriptional control of gene expression
GENOME BIOLOGY 4 (7): Art. No. 223
1458
120618411292 2004 Nedialkov YA; Triezenberg SJ
Quantitative assessment of in vitro interactions implicates TATA-binding protein as a target of the VP16C transcriptional activation region
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 425 (1): 77-86
39
#LCRNCRNode / Date / Author / JournalLCSGCS
1216111611320 2004 Svejstrup JQ
The RNA polymerase II transcription cycle: cycling through chromatin
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1677 (1-3): 64-73
821
122619811709 2004 Lusser A; Kadonaga JT
Strategies for the reconstitution of chromatin
NATURE METHODS 1 (1): 19-26
05
1236111612159 2005 Studitsky VM
Chromatin remodeling by RNA-polymerase II
MOLECULAR BIOLOGY 39 (4): 639-654
00
1246110412443 2006 Singh H; Erkine AM; Kremer SB; Duttweiler HM; Davis DA; et al.
A functional module of yeast mediator that governs the dynamic range of heat-shock gene expression
GENETICS 172 (4): 2169-2184
00
125601107721 1997 Wu C
Chromatin remodeling and the control of gene expression
JOURNAL OF BIOLOGICAL CHEMISTRY 272 (45): 28171-28174
39133
126601338055 1998 Widom J
Structure, dynamics, and function of chromatin in vitro
ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE 27: 285-327
48128
12760798712 1999 Hampsey M; Reinberg D
RNA polymerase II as a control panel for multiple coactivator complexes
CURRENT OPINION IN GENETICS & DEVELOPMENT 9 (2): 132-139
62114
128602148777 1999 de Laat WL; Jaspers NGJ; Hoeijmakers JHJ
Molecular mechanism of nucleotide excision repair
GENES & DEVELOPMENT 13 (7): 768-785
55354
1296022810209 2001 Urnov FD; Wolffe AP; Guschin D
Molecular mechanisms of corepressor function
TRANSCRIPTIONAL COREPRESSORS: MEDIATORS OF EUKARYOTIC GENE REPRESSION 254: 1-33
212
130608112304 2005 Malik S; Roeder RG
Dynamic regulation of pol II transcription by the mammalian Mediator complex
TRENDS IN BIOCHEMICAL SCIENCES 30 (5): 256-263
1824
#LCRNCRNode / Date / Author / JournalLCSGCS
13159962065 1981 ERENPREISS JG; ZIRNE RA; DEMIDENKO OJ
ULTRASTRUCTURAL-STUDY OF CHROMATIN FIBRILS IN THIN-SECTIONS OF ISOLATED-NUCLEI
FOLIA HISTOCHEMICA ET CYTOCHEMICA 19 (4): 217-&
12
132594733505 1988 GROSS DS; GARRARD WT
NUCLEASE HYPERSENSITIVE SITES IN CHROMATIN
ANNUAL REVIEW OF BIOCHEMISTRY 57: 159-197
157719
133592914433 1990 VERDIER JM
REGULATORY DNA-BINDING PROTEINS IN YEAST - AN OVERVIEW
YEAST 6 (4): 271-297
1665
134591107889 1997 Kurumizaka H; Wolffe AP
Sin mutations of histone H3: Influence on nucleosome core structure and function
MOLECULAR AND CELLULAR BIOLOGY 17 (12): 6953-6969
1728
13559808387 1998 Imbalzano AN
SWI/SNF complexes and facilitation of TATA binding protein : nucleosome interactions
METHODS 15 (4): 303-314
68
136591658918 1999 Coulombre B; Burton ZF
DNA bending and wrapping around RNA polymerase: A "revolutionary" model describing transcriptional mechanisms
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS 63 (2): 457-+
3257
1375915010237 2002 Olave IA; Reck-Peterson SL; Crabtree GR
Nuclear actin and actin-related proteins in chromatin remodeling
ANNUAL REVIEW OF BIOCHEMISTRY 71: 755-781
30118
1385912611322 2004 Belotserkovskaya R; Saunders A; Lis JT; Reinberg D
Transcription through chromatin: understanding a complex FACT
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1677 (1-3): 87-99
316
139581063784 1989 WIDOM J
TOWARD A UNIFIED MODEL OF CHROMATIN FOLDING
ANNUAL REVIEW OF BIOPHYSICS AND BIOPHYSICAL CHEMISTRY 18: 365-395
51148
140582255943 1994 FELDHERR CM; AKIN D
ROLE OF NUCLEAR TRAFFICKING IN REGULATING CELLULAR-ACTIVITY
INTERNATIONAL REVIEW OF CYTOLOGY - A SURVEY OF CELL BIOLOGY, VOL 151 151: 183-228
436
#LCRNCRNode / Date / Author / JournalLCSGCS
141581576323 1995 DIMITROV S; WOLFFE AP
CHROMATIN AND NUCLEAR ASSEMBLY - EXPERIMENTAL APPROACHES TOWARDS THE RECONSTITUTION OF TRANSCRIPTIONALLY ACTIVE AND SILENT STATES
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1260 (1): 1-13
1025
142585126327 1995 Csermely P; Schnaider T; Szanto I
Signalling and transport through the nuclear membrane
BIOCHIMICA ET BIOPHYSICA ACTA-REVIEWS ON BIOMEMBRANES 1241 (3): 425-451
142
143581896863 1996 Friedberg EC
Relationships between DNA repair and transcription
ANNUAL REVIEW OF BIOCHEMISTRY 65: 15-42
40174
144581197168 1996 Aso T; Shilatifard A; Conaway JW; Conaway RC
Transcription syndromes and the role of RNA polymerase II general transcription factors in human disease
JOURNAL OF CLINICAL INVESTIGATION 97 (7): 1561-1569
310
145581339263 2000 Albright SR; Tjian R
TAFs revisited: more data reveal new twists and confirm old ideas
GENE 242 (1-2): 1-13
39153
146581049927 2001 Mizuguchi G; Vassilev A; Tsukiyama T; Nakatani Y; Wu C
ATP-dependent nucleosome remodeling and histone hyperacetylation synergistically facilitate transcription of chromatin
JOURNAL OF BIOLOGICAL CHEMISTRY 276 (18): 14773-14783
1233
14757787953 1997 Chang MP; Jaehning JA
A multiplicity of mediators: alternative forms of transcription complexes communicate with transcriptional regulators
NUCLEIC ACIDS RESEARCH 25 (24): 4861-4865
3352
14857809673 2000 Sudarsanam P; Winston F
The Swi/Snf family - nucleosome-remodeling complexes and transcriptional control
TRENDS IN GENETICS 16 (8): 345-351
57137
149571179770 2001 Fry CJ; Peterson CL
Chromatin remodeling enzymes: who's on first?
CURRENT BIOLOGY 11 (5): R185-R197
2565
150571759795 2001 Ansari AZ
Regulating gene expression: The design of synthetic transcriptional regulators
CURRENT ORGANIC CHEMISTRY 5 (8): 903-921
12
#LCRNCRNode / Date / Author / JournalLCSGCS
1515713710270 2002 Hartzog GA; Speer JL; Lindstrom DL
Transcript elongation on a nucleoprotein template
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1577 (2): 276-286
1132
1525715711487 2004 Malagon F; Tong AH; Shafer BK; Strathern JN
Genetic interactions of DST1 in Saccharomyces cerevisiae suggest a role of TFIIS in the initiation-elongation transition
GENETICS 166 (3): 1215-1227
813
1535729512284 2005 Reardon JT; Sancar A
Nucleotide excision repair
PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 79 79: 183-235
08
154561057448 1997 Carlson M
Genetics of transcriptional regulation in yeast: Connections to the RNA polymerase II CTD
ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY 13: 1-23
99136
155561277995 1997 Hoffmann A; Oelgeschlager T; Roeder RG
Considerations of transcriptional control mechanisms: Do TFIID-core promoter complexes recapitulate nucleosome-like functions?
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 94 (17): 8928-8935
2158
156565278399 1998 Gustin MC; Albertyn J; Alexander M; Davenport K
MAP kinase pathways in the yeast Saccharomyces cerevisiae
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS 62 (4): 1264-+
14376
15756948416 1998 Drysdale CM; Jackson BM; McVeigh R; Klebanow ER; Bai Y; et al.
The Gcn4p activation domain interacts specifically in vitro with RNA polymerase II holoenzyme, TFIID, and the Adap-Gcn5p coactivator complex
MOLECULAR AND CELLULAR BIOLOGY 18 (3): 1711-1724
3465
158569010023 2001 Ellis MJ; Hebert H
Structure analysis of soluble proteins using electron crystallography
MICRON 32 (5): 541-550
210
159568910032 2001 Kraemer SM; Ranallo RT; Ogg RC; Stargell LA
TFIIA interacts with TFIID via association with TATA-binding protein and TAF40
MOLECULAR AND CELLULAR BIOLOGY 21 (5): 1737-1746
412
160568810300 2002 Narlikar GJ; Fan HY; Kingston RE
Cooperation between complexes that regulate chromatin structure and transcription
CELL 108 (4): 475-487
139489
#LCRNCRNode / Date / Author / JournalLCSGCS
1615611110668 2002 Tsukiyama T
The in vivo functions of ATP-dependent chromatin-remodelling factors
NATURE REVIEWS MOLECULAR CELL BIOLOGY 3 (6): 422-429
2457
1625623110770 2003 Smale ST; Kadonaga JT
The RNA polymerase II core promoter
ANNUAL REVIEW OF BIOCHEMISTRY 72: 449-479
18105
16355854278 1990 BAVYKIN SG; USACHENKO SI; ZALENSKY AO; MIRZABEKOV AD
STRUCTURE OF NUCLEOSOMES AND ORGANIZATION OF INTERNUCLEOSOMAL DNA IN CHROMATIN
JOURNAL OF MOLECULAR BIOLOGY 212 (3): 495-511
2467
1645529196859 1996 Zhimolev IF
Morphology and structure of polytene chromosomes
ADVANCES IN GENETICS, VOL 34 34: 1-490
119
165551028662 1999 Kornberg RD; Lorch YL
Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome
CELL 98 (3): 285-294
402402
166551049481 2000 Tsukihashi Y; Miyake T; Kawaichi M; Kokubo T
Impaired core promoter recognition caused by novel yeast TAF145 mutations can be restored by creating a canonical TATA element within the promoter region of the TUB2 gene
MOLECULAR AND CELLULAR BIOLOGY 20 (7): 2385-2399
1121
1675536211938 2005 Brock HW; Fisher CL
Maintenance of gene expression patterns
DEVELOPMENTAL DYNAMICS 232 (3): 633-655
212
1685511612073 2005 Fisher RP
Secrets of a double agent: CDK7 in cell-cycle control and transcription
JOURNAL OF CELL SCIENCE 118 (22): 5171-5180
14
169542272318 1982 WALKER JM; GOODWIN GH; SMITH BJ; JOHNS EW
THE CHROMOSOMAL-PROTEINS
COMPREHENSIVE BIOCHEMISTRY 19B: 507-573
06
170541903378 1987 COLE RD
MICROHETEROGENEITY IN H-1 HISTONES AND ITS CONSEQUENCES
INTERNATIONAL JOURNAL OF PEPTIDE AND PROTEIN RESEARCH 30 (4): 433-449
12135
#LCRNCRNode / Date / Author / JournalLCSGCS
171545674804 1991 MILLER M; PARK MK; HANOVER JA
NUCLEAR-PORE COMPLEX - STRUCTURE, FUNCTION, AND REGULATION
PHYSIOLOGICAL REVIEWS 71 (3): 909-949
981
172541148197 1998 Gregory PD; Horz W
Chromatin and transcription - How transcription factors battle with a repressive chromatin environment
EUROPEAN JOURNAL OF BIOCHEMISTRY 251 (1-2): 9-18
835
173545218917 1999 Zhao J; Hyman L; Moore C
Formation of mRNA 3 ' ends in eukaryotes: Mechanism, regulation, and interrelationships with other steps in mRNA synthesis
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS 63 (2): 405-+
27324
174541049194 2000 Roberts SGE
Mechanisms of action of transcription activation and repression domains
CELLULAR AND MOLECULAR LIFE SCIENCES 57 (8-9): 1149-1160
423
1755416410097 2001 Urnov FD; Wolffe AP
A necessary good: Nuclear hormone receptors and their chromatin templates
MOLECULAR ENDOCRINOLOGY 15 (1): 1-16
735
176549511712 2004 Taatjes DJ; Marr MT; Tjian R
Opinion - Regulatory diversity among metazoan co-activator complexes
NATURE REVIEWS MOLECULAR CELL BIOLOGY 5 (5): 403-410
1528
1775415712349 2006 Ataian Y; Krebs JE
Five repair pathways in one context: chromatin modification during DNA repair
BIOCHEMISTRY AND CELL BIOLOGY-BIOCHIMIE ET BIOLOGIE CELLULAIRE 84 (4): 490-504
00
178538211224 2003 Ito T
Nucleosome assembly and remodeling
PROTEIN COMPLEXES THAT MODIFY CHROMATIN 274: 1-22
49
1795311812347 2006 Morillon A
Is histone loss a common feature of DNA metabolism regulation?
BIOCHEMISTRY AND CELL BIOLOGY-BIOCHIMIE ET BIOLOGIE CELLULAIRE 84 (4): 450-462
00
18052681857 1980 KLUG A; RHODES D; SMITH J; FINCH JT; THOMAS JO
A LOW RESOLUTION STRUCTURE FOR THE HISTONE CORE OF THE NUCLEOSOME
NATURE 287 (5782): 509-516
149261
#LCRNCRNode / Date / Author / JournalLCSGCS
181521284825 1991 SIMPSON RT
NUCLEOSOME POSITIONING - OCCURRENCE, MECHANISMS, AND FUNCTIONAL CONSEQUENCES
PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY 40: 143-184
103191
182522275684 1993 DHAWALE SS; LANE AC
COMPILATION OF SEQUENCE-SPECIFIC DNA-BINDING PROTEINS IMPLICATED IN TRANSCRIPTIONAL CONTROL IN FUNGI
NUCLEIC ACIDS RESEARCH 21 (24): 5537-5546
745
183522355721 1993 DEWINDE JH; GRIVELL LA
GLOBAL REGULATION OF MITOCHONDRIAL BIOGENESIS IN SACCHAROMYCES-CEREVISIAE
PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 46 46: 51-91
674
18452987646 1997 Roberts SM; Winston F
Essential functional interactions of SAGA, a Saccharomyces cerevisiae complex of Spt, Ada, and Gcn5 proteins, with the Snf/Swi and Srb/mediator complexes
GENETICS 147 (2): 451-465
94186
185523248156 1998 Muniyappa K; Kironmai KM
Telomere structure, replication and length maintenance
CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY 33 (4): 297-336
122
18652778315 1998 Kershnar E; Wu SY; Chiang CM
Immunoaffinity purification and functional characterization of human transcription factor IIH and RNA polymerase II from clonal cell lines that conditionally express epitope-tagged subunits of the multiprotein complexes
JOURNAL OF BIOLOGICAL CHEMISTRY 273 (51): 34444-34453
614
187527610299 2002 Woychik NA; Hampsey M
The RNA polymerase II machinery: Structure illuminates function
CELL 108 (4): 453-463
67105
188527810909 2003 Sharma VM; Li B; Reese JC
SWI/SNF-dependent chromatin remodeling of RNR3 requires TAF(II)s and the general transcription machinery
GENES & DEVELOPMENT 17 (4): 502-515
1018
189528511087 2003 Kou HP; Irvin JD; Huisinga KL; Mitra M; Pugh BF
Structural and functional analysis of mutations along the crystallographic dimer interface of the yeast TATA binding protein
MOLECULAR AND CELLULAR BIOLOGY 23 (9): 3186-3201
67
190526511219 2003 Cantin GT; Stevens JL; Berk AJ
Activation domain-mediator interactions promote transcription preinitiation complex assembly on promoter DNA
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100 (21): 12003-12008
1419
#LCRNCRNode / Date / Author / JournalLCSGCS
1915290011604 2004 Borkovich KA; Alex LA; Yarden O; Freitag M; Turner GE; et al.
Lessons from the genome sequence of Neurospora crassa: Tracing the path from genomic blueprint to multicellular organism
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS 68 (1): 1-+
271
19251681268 1978 OUDET P; GERMOND JE; BELLARD M; SPADAFORA C; CHAMBON P
NUCLEOSOME STRUCTURE
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES B- BIOLOGICAL SCIENCES 283 (997): 241-&
2634
193511177532 1997 Ramakrishnan V
Histone H1 and chromatin higher-order structure
CRITICAL REVIEWS IN EUKARYOTIC GENE EXPRESSION 7 (3): 215-230
1958
19451758660 1999 Hamiche A; Sandaltzopoulos R; Gdula DA; Wu C
ATP-dependent histone octamer sliding mediated by the chromatin remodeling complex NURF
CELL 97 (7): 833-842
110169
1955110010267 2002 Dvir A
Promoter escape by RNA polymerase II
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1577 (2): 208-223
1222
196519210798 2003 Morse RH
Getting into chromatin: how do transcription factors get past the histones?
BIOCHEMISTRY AND CELL BIOLOGY-BIOCHIMIE ET BIOLOGIE CELLULAIRE 81 (3): 101-112
46
1975121211318 2004 Kinyamu HK; Archer TK
Modifying chromatin to permit steroid hormone receptor-dependent transcription
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1677 (1-3): 30-45
218
1985132812019 2005 Gilbert N; Gilchrist S; Bickmore WA
Chromatin organization in the mammalian nucleus
INTERNATIONAL REVIEW OF CYTOLOGY - A SURVEY OF CELL BIOLOGY, VOL. 242 242: 283-+
011
199516612020 2005 Sampath V; Sadhale P
Rpb4 and Rpb7: A sub-complex integral to multi-subunit RNA polymerases performs a multitude of functions
IUBMB LIFE 57 (2): 93-102
01
200501381225 1978 GEORGIEV GP; BAKAEV VV
3 LEVELS OF STRUCTURAL ORGANIZATION OF EUKARYOTE CHROMOSOMES
MOLECULAR BIOLOGY 12 (6): 925-946
22

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