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Mon Mar 14 15:18:10 2005
The genome sequence of the SARS-associated coronavirus
MARRA MA, JONES SJM, ASTELL CR, et al.
SCIENCE 300: 1399-1404 2003
and the citing papers

Nodes: 371, Authors: 2137, Journals: 149, Outer References: 6663, Words: 1027
Collection span: 2003 - 2005
View: Overview. Sorted by LCR.
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#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
301231196 2004 INTERNATIONAL JOURNAL OF OCCUPATIONAL AND ENVIRONMENTAL HEALTH 10(4):421-427
Chan-Yeung M
Severe acute respiratory syndrome (SARS) and Healthcare workers
01
302259198 2004 JOHNS HOPKINS APL TECHNICAL DIGEST 25(1):27-37
Demirev PA; Feldman AB; Lin JS
Bioinformatics-based strategies for rapid microorganism identification by mass spectrometry
01
303224199 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(3):1637-1642
Fan KQ; Wei P; Feng Q; Chen SD; Huang CK; et al.
Biosynthesis, purification, and substrate specificity of severe acute respiratory syndrome coronavirus 3C-like proteinase
1218
304234201 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(11):10136-10141
Prentice E; Jerome WG; Yoshimori T; Mizushima N; Denison MR
Coronavirus replication complex formation utilizes components of cellular autophagy
02
305254205 2004 JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS 22(1):65-77
Liu HL; Lin JC; Ho Y; Hsieh WC; Chen CW; et al.
Molecular dynamics simulations of various coronavirus main proteinases
00
306228216 2004 JOURNAL OF CLINICAL PATHOLOGY 57(3):260-265
Tse GMK; To KF; Chan PKS; Lo AWI; Ng KC; et al.
Pulmonary pathological features in coronavirus associated severe acute respiratory syndrome (SARS)
410
30727219 2004 JOURNAL OF CLINICAL VIROLOGY 31(1):66-68
Shi YL; Wan ZY; Li LH; Li P; Li CF; et al.
Antibody responses against SARS-coronavirus and its nucleocaspid in SARS patients
12
308228223 2004 JOURNAL OF INFECTIOUS DISEASES 189(4):648-651
Li TS; Qiu ZF; Zhang LQ; Han Y; He W; et al.
Significant changes of peripheral T lymphocyte subsets in patients with severe acute respiratory syndrome
24
309223227 2004 JOURNAL OF INFECTIOUS DISEASES 190(2):379-386
Leung DTM; Tam FCH; Ma CH; Chan PKS; Cheung JLK; et al.
Antibody response of patients with severe acute respiratory syndrome (SARS) targets the viral nucleocapsid
34
310231235 2004 JOURNAL OF MOLECULAR BIOLOGY 341(3):769-779
Arbely E; Khattari Z; Brotons G; Akkawi M; Salditt T; et al.
A highly unusual palindromic transmembrane helical hairpin formed by SARS coronavirus E protein
02
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
311223237 2004 JOURNAL OF PATHOLOGY 202(2):157-163
To K; Tong JHM; Chan PKS; Au FWL; Chim SSC; et al.
Tissue and cellular tropism of the coronavirus associated with severe acute respiratory syndrome: an in-situ hybridization study of fatal cases
614
312257242 2004 JOURNAL OF THE CHINESE CHEMICAL SOCIETY 51(5A):889-900
Liu HL; Lin JC; Ho Y; Hsieh WC; Chen CW; et al.
Homology models and molecular dynamics simulations of main proteinase from coronavirus associated with severe acute respiratory syndrome (SARS)
00
313211243 2004 JOURNAL OF VIROLOGICAL METHODS 119(1):17-23
Wu QF; Xu ZY; Wei T; Zeng HP; Li JX; et al.
Development of taqman RT-nested PCR system for clinical SARS-CoV detection
00
314224244 2004 JOURNAL OF VIROLOGICAL METHODS 119(2):57-64
Escors D; Capiscol C; Enjuanes L
Immunopurification applied to the study of virus protein composition and encapsidation
11
315238249 2004 JOURNAL OF VIROLOGY 78(9):4638-4645
Kim TW; Lee JH; Hung CF; Peng SW; Roden R; et al.
Generation and characterization of DNA vaccines targeting the nucleocapsid protein of severe acute respiratory syndrome coronavirus
913
316231250 2004 JOURNAL OF VIROLOGY 78(11):5612-5618
Wang YD; Sin WYF; Xu GB; Yang HH; Wong TY; et al.
T-cell epitopes in Severe acute respiratory syndrome (SARS) coronavirus spike protein elicit a specific T-cell immune response in patients who recover from SARS
13
317282253 2004 JOURNAL OF VIROLOGY 78(11):5891-5899
Neuman BW; Stein DA; Kroeker AD; Paulino AD; Moulton HM; et al.
Antisense morpholino-oligomers directed against the 5 ' end of the genome inhibit coronavirus proliferation and growth
02
31827268 2004 JOURNAL OF VIROLOGY 78(20):11401-11404
Rowe T; Gao GP; Hogan RJ; Crystal RG; Voss TG; et al.
Macaque model for severe acute respiratory syndrome
00
319229285 2004 NATURE MEDICINE 10(3):290-293
Haagmans BL; Kuiken T; Martina BE; Fouchier RAM; Rimmelzwaan GF; et al.
Pegylated interferon-alpha protects type 1 pneumocytes against SARS coronavirus infection in macaques
728
320224291 2004 NATURE STRUCTURAL & MOLECULAR BIOLOGY 11(4):293-295
Stevens RC
Long live structural biology
02
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
321221292 2004 NEW ENGLAND JOURNAL OF MEDICINE 350(23):2352-2361
Svoboda T; Henry B; Shulman L; Kennedy E; Rea E; et al.
Public health measures to control the spread of the severe acute respiratory syndrome during the outbreak in Toronto
18
32229312 2004 PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS 31(3):249-254
Chen SH; Zhang ML; Huang J; Ding Y; Bo XC; et al.
Development of real time RT-PCR assay for the quantitation of SARS-associated coronavirus
00
323221313 2004 PROTEIN EXPRESSION AND PURIFICATION 38(1):116-122
Xu YH; Cole DK; Lou ZY; Liu YW; Lan Q; et al.
Construct design, biophysical, and biochemical characterization of the fusion core from mouse hepatitis virus (a coronavirus) spike protein
00
324212320 2004 TERAPEVTICHESKII ARKHIV 76(4):25-30
Shipulin GA; Yatsyshina SB; Chulanov VP; Markelov MY; Shipulina OY; et al.
Development and evaluation of the kit for detection of SARS-associated coronavirus RNA
00
325236321 2004 THORAX 59(5):414-420
Sung JJY; Wu A; Joynt GM; Yuen KY; Lee N; et al.
Severe acute respiratory syndrome: report of treatment and outcome after a major outbreak
310
326231323 2004 TRANSFUSION 44(4):470-475
Schmidt M; Brixner V; Ruster B; Hourfar MK; Drosten C; et al.
NAT screening of blood donors for severe acute respiratory syndrome coronavirus can potentially prevent transfusion associated transmissions
01
327237325 2004 TRENDS IN MICROBIOLOGY 12(3):106-111
Lio P; Goldman N
Phylogenomics and bioinformatics of SARS-CoV
22
328255331 2004 VIRUS RESEARCH 100(2):191-198
Brooks JE; Rainer AC; Parr RL; Woolcock P; Hoeff F; et al.
Comparisons of envelope through 5B sequences of infectious bronchitis coronaviruses indicates recombination occurs in the envelope and membrane genes
01
329241332 2004 VIRUS RESEARCH 101(2):155-161
Gu WJ; Zhou T; Ma JM; Sun X; Lu ZH
Analysis of synonymous codon usage in SARS Coronavirus and other viruses in the Nidovirales
01
330216333 2004 VIRUS RESEARCH 105(2):121-125
He RT; Leeson A; Ballantine M; Andonov A; Baker L; et al.
Characterization of protein-protein interactions between the nucleocapsid protein and membrane protein of the SARS coronavirus
11
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
331212335 2005 ANTIVIRAL RESEARCH 65(1):45-48
Wu CJ; Huang HW; Liu CY; Hong CF; Chan YL
Inhibition of SARS-CoV replication by siRNA
00
332210337 2005 APPLIED MATHEMATICS AND COMPUTATION 162(2):909-924
Zhang J; Lou H; Ma Z; Wu JH
A compartmental model for the analysis of SARS transmission patterns and outbreak control measures in China
00
333225344 2005 CHEMICAL PHYSICS LETTERS 401(1-3):24-29
Liu HL; Lin JC; Ho Y; Chen CW
Homology models of main proteinase from coronavirus associated with SARS
00
334218346 2005 CLINICAL AND LABORATORY HAEMATOLOGY 27(1):15-20
Chng J; Lai HC; Earnest A; Kuperan P
Haematological parameters in severe acute respiratory syndrome
00
335242348 2005 DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY 29(2):153-160
Pei JW; Collisson EW
Specific antibody secreting cells from chickens can be detected by three days and memory B cells by three weeks post-infection with the avian respiratory coronavirus
00
336236352 2005 JOURNAL OF INFECTIOUS DISEASES 191(5):755-760
Chen ZN; Mi L; Xu J; Yu JY; Wang XH; et al.
Function of HAb18G/CD147 in invasion of host cells by severe acute respiratory syndrome coronavirus
00
337284356 2005 JOURNAL OF VIROLOGY 79(2):1164-1179
Chen HY; Gill A; Dove BK; Emmett SR; Kemp CF; et al.
Mass spectroscopic characterization of the coronavirus infectious bronchitis virus nucleoprotein and elucidation of the role of phosphorylation in RNA binding by using surface plasmon resonance
00
338256369 2005 VIROLOGY 331(1):136-143
Han LY; Cai CZ; Ji ZL; Chen YZ
Prediction of functional class of novel viral proteins by a statistical learning method irrespective of sequence similarity
00
339242370 2005 VIROLOGY 332(2):498-510
Baranov PV; Henderson CM; Anderson CB; Gesteland RF; Atkins JF; et al.
Programmed ribosomal frameshifting in decoding the SARS-CoV genome
00
3401132 2003 ACTA BIOCHIMICA ET BIOPHYSICA SINICA 35(12):1140-1144
Zhang XL; Wang JR; Zhang Y; Chen ML; Zhang W; et al.
Expression, purification and identification of recombinant SARS coronavirus membrane protein
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
3411178 2003 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 307(2):382-388
Chen LL; Ou HY; Zhang R; Zhang CT
ZCURVE_CoV: a new system to recognize protein coding genes in coronavirus genomes, and its applications in analyzing SARS-CoV genomes
58
34211014 2003 BIOORGANIC & MEDICINAL CHEMISTRY LETTERS 13(22):3989-3992
Jenwitheesuk E; Samudrala R
Identifying inhibitors of the SARS coronavirus proteinase
36
34311518 2003 CELL RESEARCH 13(3):141-145
Lin Y; Shen X; Yang RF; Li YX; Ji YY; et al.
Identification of an epitope of SARS-coronavirus nucleocapsid protein
711
34411219 2003 CHEMICAL JOURNAL OF CHINESE UNIVERSITIES-CHINESE 24(8):1406-1409
Chen YT; Luo ZL; Ding JD
Preliminary computer simulation of spatial structure of SARS coronavirus E-protein
00
3451526 2003 CLINICAL AND INVESTIGATIVE MEDICINE-MEDECINE CLINIQUE ET EXPERIMENTALE 26(6):273-274
Bevan D
SARS 3: Are we ready?
00
34613833 2003 ENVIRONMENTAL HEALTH PERSPECTIVES 111(10):A506-A507
Epstein PR; Chivian E; Frith K
Emerging diseases threaten conservation
02
34719534 2003 EXPERT OPINION ON BIOLOGICAL THERAPY 3(8):1279-1289
Ackley CJ; Greene NR; Lowrey CH
Defensive applications of gene transfer technology in the face of bioterrorism: DNA-based vaccines and immune targeting
00
3481340 2003 JAPANESE JOURNAL OF INFECTIOUS DISEASES 56(3):139-141
Nakajima N; Asahi-Ozaki Y; Nagata N; Sato Y; Dizon F; et al.
SARS coronavirus-infected cells in lung detected by new in situ hybridization technique
59
3491544 2003 JOURNAL OF CLINICAL MICROBIOLOGY 41(12):5781-5782
Shi YL; Yi YP; Li P; Kuang TJ; Li LH; et al.
Diagnosis of severe acute respiratory syndrome (SARS) by detection of SARS coronavirus nucleocapsid antibodies in an antigen-capturing enzyme-linked immunosorbent assay
1016
35014752 2003 JOURNAL OF VIROLOGY 77(19):10515-10527
Brockway SM; Clay CT; Lu XT; Denison MR
Characterization of the expression, intracellular localization, and replication complex association of the putative mouse hepatitis virus RNA-dependent RNA polymerase
68
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
35112054 2003 LANCET 362(9393):1353-1358
Zhong NS; Zheng BJ; Li YM; Poon LLM; Xie ZH; et al.
Epidemiology and cause of severe acute respiratory syndrome (SARS) in Guangdong, People's Republic of China, in February, 2003
2747
35212256 2003 M S-MEDECINE SCIENCES 19(8-9):885-891
Tratner I
SARS-CoV: 1. The virus
00
3531760 2003 MOLECULAR BIOTECHNOLOGY 25(2):107-112
Zhang L; Meng B; Liao DF; Zhou LY; Zhang X; et al.
De novo synthesis of PCR templates for the development of SARS diagnostic assay
02
35413866 2003 NUCLEIC ACIDS RESEARCH 31(23):7041-7055
Mills R; Rozanov M; Lomsadze A; Tatusova T; Borodovsky M
Improving gene annotation of complete viral genomes
03
35512380 2003 SCIENCE 300(5624):1394-1399
Rota PA; Oberste MS; Monroe SS; Nix WA; Campagnoli R; et al.
Characterization of a novel coronavirus associated with severe acute respiratory syndrome
309406
35613281 2003 SCIENCE 300(5624):1399-1404
Marra MA; Jones SJM; Astell CR; Holt RA; Brooks-Wilson A; et al.
The genome sequence of the SARS-associated coronavirus
370370
35711282 2003 SCIENCE 300(5627):1961-1966
Riley S; Fraser C; Donnelly CA; Ghani AC; Abu-Raddad LJ; et al.
Transmission dynamics of the etiological agent of SARS in Hong Kong: Impact of public health interventions
2094
3581883 2003 SCIENCE 302(5643):276-278
Guan Y; Zheng BJ; He YQ; Liu XL; Zhuang ZX; et al.
Isolation and characterization of viruses related to the SARS coronavirus from animals in Southern China
80162
35916128 2004 BIOINFORMATICS 20(16):2863-2864
Lee WH; Vega VB
Heterogeneity detector: finding heterogeneous positions in Phred/Phrap assemblies
00
360146138 2004 CANADIAN MEDICAL ASSOCIATION JOURNAL 171(10):1203-1208
Slutsky AS; Jha P; Aslanyan G; Bergeron MG; Brown D; et al.
Health and economic benefits of an accelerated program of research to combat global infectious diseases
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
361110171 2004 EMERGING INFECTIOUS DISEASES 10(2):317-319
Hensley LE; Fritz EA; Jahrling PB; Karp CL; Huggins JW; et al.
Interferon-beta 1a and SARS coronavirus replication
19
362133182 2004 FEBS LETTERS 560(1-3):141-146
Zhang YJ; Li TS; Fu L; Yu CM; Li YH; et al.
Silencing SARS-CoV Spike protein expression in cultured cells by RNA interference
25
363127187 2004 GENOME RESEARCH 14(3):398-405
Wong CW; Albert TJ; Vega VB; Norton JE; Cutler DJ; et al.
Tracking the evolution of the SARS coronavirus using high-throughput, high-density resequencing arrays
02
364124188 2004 GENOME RESEARCH 14(5):956-962
Montgomery SB; Astakhova T; Bilenky M; Birney E; Fu T; et al.
Sockeye: A 3D environment for comparative genomics
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365110206 2004 JOURNAL OF CLINICAL MICROBIOLOGY 42(1):347-350
Ng LFP; Wong M; Koh S; Ooi EE; Tang KF; et al.
Detection of severe acute respiratory syndrome coronavirus in blood of infected patients
38
36618241 2004 JOURNAL OF PROTEOME RESEARCH 3(6):1292-1295
Wisz MS; Suarez MK; Holmes MR; Giddings MC
GFSWeb: A web tool for genome-based identification of proteins from mass spectrometric samples
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3671140293 2004 OLIGONUCLEOTIDES 14(1):49-64
Ravichandran LV; Dean NM; Marcusson EG
Use of antisense oligonucleotides in functional genomics and target validation
04
368132306 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(22):8449-8454
Hoffmaster AR; Ravel J; Rasko DA; Chapman GD; Chute MD; et al.
Identification of anthrax toxin genes in a Bacillus cereus associated with an illness resembling inhalation anthrax
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3691103316 2004 PROTEOMICS IN NEPHROLOGY 141:59-78
Sechi S
Mass spectrometric approaches to quantitative proteomics
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370127322 2004 TISSUE ANTIGENS 63(5):395-400
Sylvester-Hvid C; Nielsen M; Lamberth K; Roder G; Justesen S; et al.
SARS CTL vaccine candidates; HLA supertype-, genome-wide scanning and biochemical validation
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371156353 2005 JOURNAL OF THEORETICAL BIOLOGY 232(1):71-81
Meyers LA; Pourbohloul B; Newman MEJ; Skowronski DM; Brunham RC
Network theory and SARS: predicting outbreak diversity
00

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