Record 3003   View: Standard Glossary  HistCite Guide
Author(s): Kitano H
Title: Biological robustness
Source: NATURE REVIEWS GENETICS 5 (11): 826-837
Date: 2004 NOV
Document Type: Journal : Review
DOI:  
Language: English
Comment:  
Address: Sony Comp Sci Labs Inc, Shinagawa Ku, Tokyo 1410022, Japan.
Syst Biol Inst, Tokyo 1500001, Japan.
Reprint: Kitano, H, Sony Comp Sci Labs Inc, Shinagawa Ku, 3-14-13 Higashi
Gotanda, Tokyo 1410022, Japan.
E-mail: kitano@csl.sony.co.jp
Author Keywords:  
KeyWords Plus: PROTEIN-COUPLED RECEPTORS; P53-MDM2 FEEDBACK LOOP; GENETIC ROBUSTNESS; SACCHAROMYCES-CEREVISIAE; BACTERIAL CHEMOTAXIS; BIOCHEMICAL NETWORKS; MOLECULAR EVOLUTION; GENOME DUPLICATION; SIGNALING PATHWAYS; METABOLIC NETWORKS
Abstract: Robustness is a ubiquitously observed property of biological systems. It is considered to be a fundamental feature of complex evolvable systems. It is attained by several underlying principles that are universal to both biological organisms and sophisticated engineering systems. Robustness facilitates evolvability and robust traits are often selected by evolution. Such a mutually beneficial process is made possible by specific architectural features observed in robust systems. But there are trade-offs between robustness, fragility, performance and resource demands, which explain system behaviour, including the patterns of failure. Insights into inherent properties of robust systems will provide us with a better understanding of complex diseases and a guiding principle for therapy design.
Cited References:
AGRAWAL AA, 2001, SCIENCE, V294, P321
ALBERT R, 2000, NATURE, V406, P378
ALON U, 1999, NATURE, V397, P168
AO P, 2004, J PHYS A-MATH GEN, V37, PL25
ARKIN A, 1998, GENETICS, V149, P1633
ASHBURNER M, 2000, NAT GENET, V25, P25
BAGOWSKI CP, 2003, CURR BIOL, V13, P315
BAK P, 1988, PHYS REV A, V38, P364
BALDWIN C, 2000, DESIGN RULES, V1
BARABASI AL, 1999, SCIENCE, V286, P509
BARABASI AL, 2004, NAT REV GENET, V5, P101
BARKAI N, 1997, NATURE, V387, P913
BARKAI N, 2002, CURR BIOL, V12, PR493
BAROR RL, 2000, P NATL ACAD SCI USA, V97, P11250
BERG J, 2002, BIOCHEMISTRY
BERGMAN A, 2003, NATURE, V424, P549
BHALLA US, 2001, CHAOS, V11, P221
BINGLE L, 2002, J PATHOL, V196, P254
BORISUK MT, 1998, J THEOR BIOL, V195, P69
BRODER A, 2000, 9 INT WORLD WID WEB, P309
CARLSON JM, 1999, PHYS REV E A, V60, P1412
CARLSON JM, 2002, P NATL ACAD SCI U S1, V99, P2538
CARROLL S, 2001, DNA DIVERSITY MOL GE
CARROLL SB, 2001, NATURE, V409, P1102
CASSEL D, 1978, P NATL ACAD SCI USA, V75, P2669
CHEN KC, 2004, MOL BIOL CELL, V15, P3841
CONANT GC, 2003, NAT GENET, V34, P264
CSETE M, 2004, TRENDS BIOTECHNOL, V22, P446
CSETE ME, 2002, SCIENCE, V295, P1664
DERISI JL, 1997, SCIENCE, V278, P680
DEVISSER JAGM, 2003, EVOLUTION, V57, P1959
DOYLE JC, 1989, IEEE T AUTOMAT CONTR, V34, P831
DROPULIC B, 1996, P NATL ACAD SCI USA, V93, P11103
EDWARDS JS, 2000, BIOTECHNOL PROGR, V16, P927
EDWARDS JS, 2001, NAT BIOTECHNOL, V19, P125
ELDAR A, 2002, NATURE, V419, P304
FERRELL JE, 2002, CURR OPIN CELL BIOL, V14, P140
FREEMAN M, 2000, NATURE, V408, P313
GEHRING WJ, 1998, MASTER CONTROL GENES
GERHART J, 1997, CELLS EMBRYOS EVOLUT
GU X, 2003, TRENDS GENET, V19, P354
GU ZL, 2003, NATURE, V421, P63
HAKEN H, 1978, SYNERGETICS INTRO
HALDER G, 1995, SCIENCE, V267, P1788
HARRIS AL, 2002, NAT REV CANCER, V2, P38
HARTMAN JL, 2001, SCIENCE, V291, P1001
HARTWELL LH, 1999, NATURE, V402, P47
HASTY J, 2002, NATURE, V420, P224
HERMANS E, 2003, PHARMACOL THERAPEUT, V99, P25
HOUCHMANDZADEH B, 2002, NATURE, V415, P798
INGOLIA NT, 2004, PLOS BIOL, V2, P805, ARE123
JEONG H, 2000, NATURE, V407, P651
JORDAN JD, 1998, BIOCHEM PHARMACOL, V55, P1347
JORDAN JD, 2000, CELL, V103, P193
KAUFMAN T, 1990, ADV GENET, V27, P309
KELLIS M, 2004, NATURE, V428, P617
KIMURA M, 1977, NATURE, V267, P275
KIMURA M, 1979, SCI AM, V241, P102
KIMURA M, 1979, SCI AM, V241, P108
KIMURA M, 1979, SCI AM, V241, P98
KIRSCHNER M, 1998, P NATL ACAD SCI USA, V95, P8420
KITAMI T, 2002, NAT GENET, V32, P191
KITANO H, 2002, NATURE, V420, P206
KITANO H, 2002, SCIENCE, V295, P1662
KITANO H, 2003, NATURE, V426, P125
KITANO H, 2004, DIABETES S3, V53, P1
KITANO H, 2004, NAT REV CANCER, V4, P227
LAHAV G, 2004, NAT GENET, V36, P147
LAMPORT L, 1982, ACM T PROGR LANG SYS, V4, P382
LANGKJAER RB, 2003, NATURE, V421, P848
LEWIS EB, 1978, NATURE, V276, P565
LITTLE JW, 1999, EMBO J, V18, P4299
MA HW, 2003, BIOINFORMATICS, V19, P1423
MA L, 2002, BMC BIOINFORMATICS, V3, AR38
MARTINS NC, 2004, 42 ANN ALL C COMM CO
MARTINS NC, IEEE C DEC CONTR IEE
MATTICK JS, 2001, EMBO REP, V2, P986
MATTICK JS, 2003, BIOESSAYS, V25, P930
MATTICK JS, 2004, NAT REV GENET, V5, P316
MAUTINO MR, 2002, AIDS PATIENT CARE ST, V16, P11
MCADAMS HH, 1995, SCIENCE, V269, P650
MCADAMS HH, 1997, P NATL ACAD SCI USA, V94, P814
MCADAMS HH, 1999, TRENDS GENET, V15, P65
MCADAMS HH, 2004, NAT REV GENET, V5, P169
MCCUNE JM, 2001, NATURE, V410, P974
MCMICHAEL AJ, 2001, NATURE, V410, P980
MOROHASHI M, 2002, J THEOR BIOL, V216, P19
MOSS J, 1989, J LAB CLIN MED, V113, P258
NICOLIS G, 1977, SELF ORG NONEQUILIBR
NIEUWKOOP PD, 1963, DEV BIOL, V7, P255
NIEUWKOOP PD, 1985, J EMBRYOL EXP MORPH, V89, P333
NOWAK MA, 1997, NATURE, V388, P167
OHNO S, 1970, EVOLUTION GENE DUPLI
PIRESDASILVA A, 2003, NAT REV GENET, V4, P39
POMERANTZ RJ, 2002, NATURE, V418, P594
PRAJNA S, 2002, IEEE DECIS CONTR P, P741
PRAJNA S, 2003, P AMER CONTR CONF, P2779
PRIGOGINE I, 1954, CHEM THERMODYNAMICS
PRIGOGINE I, 1969, NATURE, V223, P913
PRIGOGINE I, 1974, ANN NY ACAD SCI, V231, P99
PTASHNE MA, 1987, GENETIC SWITCH GENE
QUEITSCH C, 2002, NATURE, V417, P618
RAO CV, 2002, NATURE, V420, P231
RAO CV, 2004, PLOS BIOL, V2, P239
RICHMAN DD, 2001, NATURE, V410, P995
RUTHERFORD SL, 1998, NATURE, V396, P336
RUTHERFORD SL, 2003, NAT REV GENET, V4, P263
SANTILLAN M, 2004, BIOPHYS J 1, V86, P75
SCHLICHTING C, 1998, PHENOTYPIC EVOLUTION
SCHLOSSER G, 2004, MODULARITY DEV EVOLU
SCHREIBER SL, 2002, CELL, V111, P771
SCHWOB E, 1993, GENE DEV, V7, P1160
SIEGAL ML, 2002, P NATL ACAD SCI USA, V99, P10528
SIMON H, 1996, SCI ARTIFICIAL
SPIRIN V, 2003, P NATL ACAD SCI USA, V100, P12123
STRUHL G, 1981, NATURE, V292, P635
TANIGUCHI T, 2001, NAT REV MOL CELL BIO, V2, P378
TEICHMANN SA, 2004, NAT GENET, V36, P492
TYSON JJ, 2001, NAT REV MOL CELL BIO, V2, P908
VANNIMWEGEN E, 2003, TRENDS GENET, V19, P479
VANNIMWEGEN E, IN PRESS POWER LAWS
VASSILATIS DK, 2003, P NATL ACAD SCI USA, V100, P4903
VONBERTALANFFY L, 1976, GEN SYSTEM THEORY FD
VONDASSOW G, 2000, NATURE, V406, P188
WADDINGTON CH, 1957, STRATEGY GENES DISCU
WAGNER GP, 1996, EVOLUTION, V50, P967
WAGNER GP, 2003, P NATL ACAD SCI USA, V100, P14603
WEINBERGER LS, 2003, J VIROL, V77, P10028
WERRY TD, 2003, BIOCHEM J 2, V374, P281
WESTEBERHARD MJ, 2003, DEV PLASTICITY EVOLU
WIENER N, 1948, CYBERNETICS CONTROL
YI TM, 2000, P NATL ACAD SCI USA, V97, P4649
ZHU XM, 2004, FUNCT INTEGR GENOMIC, V4, P188