Cited nodes	Nodes / Authors	GCS	LCS
1	101 2001 NATURE 411(6841):1003-1006 Strobel SA Biological catalysis - Repopulating the RNA world	0	0
2	102 2001 NATURE 413(6857):695-696 Newman A Molecular biology - RNA enzymes for RNA splicing	1	0
8	103 2001 NATURE 413(6858):814-821 Schlunzen F; Zarivach R; Harms R; Bashan A; Tocilj A; Albrecht R; Yonath A; Franceschi F Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria	27	16
8	104 2001 NATURE REVIEWS MOLECULAR CELL BIOLOGY 2(7):514-520 Lafontaine DLJ; Tollervey D The function and synthesis of ribosomes	8	0
2	105 2001 NATURE STRUCTURAL BIOLOGY 8(1):11-13 Sontheimer EJ The spliceosome shows its metal	1	0
1	106 2001 NATURE STRUCTURAL BIOLOGY 8(12):1074-1082 Truscott KN; Kovermann P; Geissler A; Merlin A; Meijer M; Driessen AJM; Rassow J; Pfanner N; Wagner R A presequence- and voltage-sensitive channel of the mitochondrial preprotein translocase formed by Tim23	8	0
1	107 2001 NUCLEIC ACIDS RESEARCH 29(1):214-218 Bhat TN; Bourne P; Feng ZK; Gilliland G; Jain S; Ravichandran V; Schneider B; Schneider K; Thanki N; Weissig H; Westbrook J; Berman HM The PDB data uniformity project	10	0
1	108 2001 NUCLEIC ACIDS RESEARCH 29(7):1565-1573 Lee SE; Sidorov A; Gourlain T; Mignet N; Thorpe SJ; Brazier JA; Dickman MJ; Hornby DP; Grasby JA; Williams DM Enhancing the catalytic repertoire of nucleic acids: a systematic study of linker length and rigidity	7	1
2	109 2001 NUCLEIC ACIDS RESEARCH 29(8):1703-1714 Grishin NV Treble clef finger - a functionally diverse zinc-binding structural motif	4	0
3	110 2001 NUCLEIC ACIDS RESEARCH 29(9):1815-1834 Takagi Y; Warashina M; Stec WJ; Yoshinari K; Taira K Recent advances in the elucidation of the mechanisms of action of ribozymes	17	3
2	111 2001 NUCLEIC ACIDS RESEARCH 29(16):3394-3403 Schaferkordt J; Wagner R Effects of base change mutations within an Escherichia coli ribosomal RNA leader region on rRNA maturation and ribosome formation	0	0
2	112 2001 NUCLEIC ACIDS RESEARCH 29(18):3705-3727 Pingoud A; Jeltsch A Structure and function of type II restriction endonucleases	23	0
1	113 2001 NUCLEIC ACIDS RESEARCH 29(19):3982-3987 Seit-Nebi A; Frolova L; Justesen J; Kisselev L Class-1 translation termination factors: invariant GGQ minidomain is essential for release activity and ribosome binding but not for stop codon recognition	9	0
2	114 2001 NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 20(4-7):383-384 Trung NQN; Strazewski P; Olsson M; Ehrenberg M The conformational space of nascent peptide-accepting 3 '- aminoacyl ribonucleos(t)ides: H-1 NMR data and ab initio calculations of puromycin and some synthetic analogs	0	0
1	115 2001 NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 20(9):1723-1734 Carrasco N; Ginsburg D; Du Q; Huang Z Synthesis of selenium-derivatized nucleosides and oligonucleotides for X-ray crystallography	1	0
2	116 2001 ORIGINS OF LIFE AND EVOLUTION OF THE BIOSPHERE 31(6):511-526 Larkin DC; Martinis SA; Roberts DJ; Fox GE Ala-His mediated peptide bond formation revisited	0	0
2	117 2001 PEPTIDES 22(10):1661-1668 Tenson T; Mankin AS Short peptides conferring resistance to macrolide antibiotics	1	1
1	118 2001 PLANT MOLECULAR BIOLOGY 46(6):673-682 McIntosh KB; Bonham-Smith PC Establishment of Arabidopsis thaliana ribosomal protein RPL23A- 1 as a functional homologue of Saccharomyces cerevisiae ribosomal protein L25	0	0
5	119 2001 POLISH JOURNAL OF CHEMISTRY 75(12):1807-1816 Giel-Pietraszuk M; Barciszewski J The ribosome and the spliceosome are the true ribozymes	0	0
3	120 2001 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(4):1393-1397 Tamura K; Schimmel P Oligonucleotide-directed peptide synthesis in a ribosome- and ribozyme-free system	6	3
3	121 2001 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(4):1489-1494 Shih I; Been MD Involvement of a cytosine side chain in proton transfer in the rate-determining step of ribozyme self-cleavage	16	10
2	122 2001 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(7):3726-3731 Belova L; Tenson T; Xiong LQ; McNicholas PM; Mankin AS A novel site of antibiotic action in the ribosome: Interaction of evernimicin with the large ribosomal subunit	7	4
2	123 2001 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(8):4355-4360 Fang XW; Golden BL; Littrell K; Shelton V; Thiyagarajan P; Pan T; Sosnick TR The thermodynamic origin of the stability of a thermophilic ribozyme	3	0
2	124 2001 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(9):4899-4903 Nissen P; Ippolito JA; Ban N; Moore PB; Steitz TA RNA tertiary interactions in the large ribosomal subunit: The A-minor motif	24	8
4	125 2001 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(16):9002-9007 Thompson J; Kim DF; O'Connor M; Lieberman KR; Bayfield MA; Gregory ST; Green R; Noller HF; Dahlberg AE Analysis of mutations at residues A2451 and G2447 of 23S rRNA in the peptidyltransferase active site of the 50S ribosomal subunit	28	24
1	126 2001 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(17):9465-9467 Stormo GD; Ji YM Do mRNAs act as direct sensors of small molecules to control their expression?	1	0
1	127 2001 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(17):9517-9520 Yu EW; Koshland DE Propagating conformational changes over long (and short) distances in proteins	4	1
2	128 2001 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(18):10037-10041 Baker NA; Sept D; Joseph S; Holst MJ; McCammon JA Electrostatics of nanosystems: Application to microtubules and the ribosome	12	2
5	129 2001 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 98(18):10096-10101 Bayfield MA; Dahlberg AE; Schulmeister U; Dorner S; Barta A A conformational change in the ribosomal peptidyl transferase center upon active/inactive transition	16	15
4	130 2001 PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY 75(1-2):75-120 Lahav N; Nir S; Elitzur AC The emergence of life on Earth	0	0
6	131 2001 PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY 75(3):121-164 Ruprecht J; Nield J Determining the structure of biological macromolecules by transmission electron microscopy, single particle analysis and 3D reconstruction	2	0
4	132 2001 PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 70 70():291-334 Vortler S; Putz J; Giege R Manipulation of tRNA properties by structure-based and combinatorial in vitro approaches	0	0
2	133 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(4):499-512 Leontis NB; Westhof E Geometric nomenclature and classification of RNA base pairs	10	3
2	134 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(4):537-545 O'Rear JL; Wang SL; Feig AL; Beigelman L; Uhlenbeck OC; Herschlag D Comparison of the hammerhead cleavage reactions stimulated by monovalent and divalent cations	22	0
3	135 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(4):546-552 Curtis EA; Bartel DP The hammerhead cleavage reaction in monovalent cations	21	4
2	136 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(5):661-670 Beales LP; Rowlands DJ; Holzenburg A The internal ribosome entry site (IRES) of hepatitis C virus visualized by electron microscopy	5	0
2	137 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(5):692-701 Nakashima T; Yao M; Kawamura S; Iwasaki K; Kimura M; Tanaka I Ribosomal protein L5 has a highly twisted concave surface and flexible arms responsible for rRNA binding	4	3
2	138 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(5):702-709 Tsu CA; Kossen K; Uhlenbeck OC The Escherichia coli DEAD protein DbpA recognizes a small RNA hairpin in 23S rRNA	4	0
3	139 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(8):1055-1067 Woese CR Translation: In retrospect and prospect	4	1
2	140 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(8):1173-1179 La Teana A; Gualerzi CO; Dahlberg AE Initiation factor IF 2 binds to the alpha-sarcin loop and helix 89 of Escherichia coli 23S ribosomal RNA	4	0
2	141 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(9):1317-1334 Daugeron MC; Kressler D; Linder P Dbp9p, a putative ATP-dependent RNA helicase involved in 60S- ribosomal-subunit biogenesis, functionally interacts with Dbp6p	2	0
5	142 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(10):1365-1369 Xiong LQ; Polacek N; Sander P; Bottger EC; Mankin A pKa of adenine 2451 in the ribosomal peptidyl transferase center remains elusive	7	7
6	143 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(10):1403-1415 Muth GW; Chen L; Kosek AB; Strobel SA pH-dependent conformational flexibility within the ribosomal peptidyl transferase center	8	7
2	144 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(11):1603-1615 Del Campo M; Kaya Y; Ofengand J Identification and site of action of the remaining four putative pseudouridine synthases in Escherichia coli	4	0
3	145 2001 RNA-A PUBLICATION OF THE RNA SOCIETY 7(12):1708-1716 de la Cruz J; Vioque A Increased sensitivity to protein synthesis inhibitors in cells lacking tmRNA	2	0
4	146 2001 RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY 27(5):352-355 Berlin YA Ribosome swaps a root	0	0
2	147 2001 SCIENCE 292(5518):883-896 Yusupov MM; Yusupova GZ; Baucom A; Lieberman K; Earnest TN; Cate JHD; Noller HF Crystal structure of the ribosome at 5.5 angstrom resolution	135	41
1	148 2001 SCIENCE 294(5545):1334-1336 Tomita K; Weiner AM Collaboration between CC- and A-adding enzymes to build and repair the 3 '-terminal CCA of tRNA in Aquifex aeolicus	1	0
3	149 2001 SCIENTIST 15(22):24-25 Russo E Hot papers - The ribosomal function comes into view - Comment	0	0
2	150 2001 STEM CELLS 19(1):92-93 Goodsell DS The molecular perspective: The ribosome	0	0
6	151 2001 STRUCTURE 9(9):751-758 Culver GM Meanderings of the mRNA through the ribosome	0	0
1	152 2001 TRENDS IN BIOCHEMICAL SCIENCES 26(2):93-99 Stubbe J; Ge J; Yee CS The evolution of ribonucleotide reduction revisited	9	1
2	153 2001 TRENDS IN BIOCHEMICAL SCIENCES 26(2):124-130 Rodnina MV; Wintermeyer W Ribosome fidelity: tRNA discrimination, proofreading and induced fit	3	2
8	154 2001 TRENDS IN BIOCHEMICAL SCIENCES 26(11):653-656 Brosius J tRNAs in the spotlight during protein biosynthesis	1	1
2	155 2002 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 58():1039-1041 Kristensen O; Laurberg M Expression, refolding and crystallization of Aquifex aeolicus elongation factor P	0	0
11	156 2002 ANNUAL REVIEW OF BIOCHEMISTRY 71():887-917 Shih IH; Been MD Catalytic strategies of the hepatitis delta virus ribozymes	1	1
7	157 2002 ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE 31():257-273 Yonath A The search and its outcome: High-resolution structures of ribosomal particles from mesophilic, thermophilic, and halophilic bacteria at various functional states	1	1
2	158 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(1):55-61 Bacchi CJ; Weiss LM; Lane S; Frydman B; Valasinas A; Reddy V; Sun JS; Marton LJ; Khan IA; Moretto M; Yarlett N; Wittner M Novel synthetic polyamines are effective in the treatment of experimental microsporidiosis, an opportunistic AIDS-Associated infection	0	0
2	159 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(1):125-131 Canu A; Malbruny B; Coquemont M; Davies TA; Appelbaum PC; Leclercq R Diversity of ribosomal mutations conferring resistance to macrolides, clindamycin, streptogramin, and telithromycin in Streptococcus pneumoniae	10	3
1	160 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(4):1080-1085 Aoki H; Ke LZ; Poppe SM; Poel TJ; Weaver EA; Gadwood RC; Thomas RC; Shinabarger DL; Ganoza MC Oxazolidinone antibiotics target the P site on Escherichia coli ribosomes	0	0
4	161 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(7):2200-2207 Malbruny B; Canu A; Bozdogan B; Fantin B; Zarrouk V; Dutka-Malen S; Feger C; Leclercq R Resistance to quinupristin-dalfopristin due to mutation of L22 ribosomal protein in Staphylococcus aureus	1	0
5	162 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(9):2727-2734 Leclercq R; Courvalin P Resistance to macrolides and related antibiotics in Streptococcus pneumoniae	0	0
1	163 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(9):2914-2919 Lazaro E; Sanz E; Remacha M; Ballesta JPG Characterization of sparsomycin resistance in Streptomyces sparsogenes	0	0
3	164 2002 ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 403(1):63-70 Kramer G; Ramachandiran V; Horowitz PM; Hardesty B The molecular chaperone DnaK is not recruited to translating ribosomes that lack trigger factor	0	0
2	165 2002 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 290(1):339-348 Kanesaki Y; Suzuki I; Allakhverdiev SI; Mikami K; Murata N Salt stress and hyperosmotic stress regulate the expression of different sets of genes in Synechocystis sp PCC 6803	0	0
2	166 2002 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 293(1):537-541 Cortazzo P; Cervenansky C; Marin M; Reiss C; Ehrlich R; Deana A Silent mutations affect in vivo protein folding in Escherichia coli	0	0
2	167 2002 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 294(1):145-148 Mielcarek M; Barciszewska MZ; Salanski P; Stobiecki M; Jurczak J; Barciszewski J Native transfer RNA catalyzes Diels-Alder reaction	0	0
2	168 2002 BIOCHEMISTRY 41(8):2492-2499 Roychowdhury-Saha M; Lato SM; Shank ED; Burke DH Flavin recognition by an RNA aptamer targeted toward FAD	0	0
3	169 2002 BIOCHEMISTRY 41(8):2516-2525 Szewczak AA; Kosek AB; Piccirilli JA; Strobel SA Identification of an active site ligand for a group I ribozyme catalytic metal ion	1	1
5	170 2002 BIOCHEMISTRY 41(11):3667-3675 Oyelere AK; Kardon JR; Strobel SA pKa perturbation in genomic hepatitis delta virus ribozyme catalysis evidenced by nucleotide analogue interference mapping	3	2
3	171 2002 BIOCHEMISTRY 41(33):10426-10438 Soukup JK; Minakawa N; Matsuda A; Strobel SA Identification of A-minor tertiary interactions within a bacterial group I intron active site by 3-deazaadenosine interference mapping	0	0
12	172 2002 BIOCHEMISTRY 41(39):11602-11610 Polacek N; Swaney S; Shinabarger D; Mankin AS SPARK - A novel method to monitor ribosomal peptidyl transferase activity	0	0
10	173 2002 BIOCHEMISTRY 41(40):12051-12061 Harris DA; Rueda D; Walter NG Local conformational changes in the catalytic core of the trans-acting hepatitis delta virus ribozyme accompany satalys	0	0
3	174 2002 BIOCHEMISTRY 41(40):12062-12075 Proctor DJ; Schaak JE; Bevilacqua JM; Falzone CJ; Bevilacqua PC Isolation and characterization of a family of stable RNA tetraloops with the motif YNMG that participate in tertiary interactions	0	0
8	175 2002 BIOCHEMISTRY-MOSCOW 67(3):372-382 Kopylov AM X-ray analysis of ribosomes: the static of the dynamic	0	0
6	176 2002 BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1577(1):53-62 Larsson SL; Sloma MS; Nygard O Conformational changes in the structure of domains II and V of 28S rRNA in ribosomes treated with the translational inhibitors ricin or alpha-sarcin	0	0
5	177 2002 BIOMACROMOLECULES 3(1):69-83 He QC; Zhou JM; Zhou DM; Nakamatsu Y; Baba T; Taira K Comparison of metal-ion-dependent cleavages of RNA by a DNA enzyme and a hammerhead ribozyme	0	0
2	178 2002 BIOPHYSICAL JOURNAL 82(1):2491- Moore PB; Hansen J; Klein DJ; Schmeing TM; Steitz TA Structure and function in the large ribosomal subunit	0	0
3	179 2002 BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY 66(1):103-109 Iwasaki K; Kikukawa S; Kawamura S; Kouzuma Y; Tanaka I; Kimura M On the interaction of ribosomal protein L5 with 5S rRNA	0	0
5	180 2002 BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY 66(3):682-684 Hayashi T; Tahara M; Iwasaki K; Kouzuma Y; Kimura M Requirement for C-terminal extension to the RNA binding domain for efficient RNA binding by ribosomal protein l2	0	0
13	181 2002 CELL 108(4):557-572 Ramakrishnan V Ribosome structure and the mechanism of translation	10	5
10	182 2002 CELL 108(5):591-594 Tenson T; Ehrenberg M Regulatory nascent peptides in the ribosomal tunnel	2	1
4	183 2002 CELL 108(5):629-636 Nakatogawa H; Ito K The ribosomal exit tunnel functions as a discriminating gate	6	3
7	184 2002 CELL 110(6):665-668 Green R; Lorsch JR The path to perdition is paved with protons	0	0
3	185 2002 CELLULAR AND MOLECULAR LIFE SCIENCES 59(4):596-607 Emilsson GM; Breaker RR Deoxyribozymes: new activities and new applications	1	0
5	186 2002 CHEMBIOCHEM 3(8):691-700 Hammann C; Lilley DMJ Folding and activity of the hammerhead ribozyme	0	0
6	187 2002 CHEMISTRY & BIOLOGY 9(4):465-473 Lebruska LL; Kuzmine II; Fedor MJ Rescue of an abasic hairpin ribozyme by cationic nucleobases: Evidence for a novel mechanism of RNA catalysis	1	1
8	188 2002 CHEMISTRY & BIOLOGY 9(9):961-969 DeRose VJ Two decades of RNA catalysis	0	0
2	189 2002 CHEMISTRY-A EUROPEAN JOURNAL 8(1):118-129 Castellano RK; Gramlich V; Diederich F Rebek imides and their adenine complexes: Preferences for Hoogsteen binding in the solid state and in solution	1	0
2	190 2002 CURRENT GENETICS 40(6):405-409 Mollier P; Hoffmann B; Debast C; Small I The gene encoding Arabidopsis thaliana mitochondrial ribosomal protein S13 is a recent duplication of the gene encoding plastid S13	0	0
2	191 2002 CURRENT OPINION IN CHEMICAL BIOLOGY 6(3):367-374 Bittker JA; Phillips KJ; Liu DR Recent advances in the in vitro evolution of nucleic acids	1	0
5	192 2002 CURRENT OPINION IN PHARMACOLOGY 2(5):493-500 Nilius AM; Ma ZK Ketolides: the future of the macrolides?	0	0
13	193 2002 CURRENT OPINION IN PHARMACOLOGY 2(5):501-506 Knowles DJC; Foloppe N; Matassova NB; Murchie AIH The bacterial ribosome, a promising focus for structure-based drug design	0	0
15	194 2002 CURRENT PROTEIN & PEPTIDE SCIENCE 3(1):1-53 Wilson DN; Blaha G; Connell SR; Ivanov PV; Jenke H; Stelzl U; Teraoka Y; Nierhaus KH Protein synthesis at atomic resolution: Mechanistics of translation in the light of highly resolved structures for the ribosome	1	0
10	195 2002 CURRENT PROTEIN & PEPTIDE SCIENCE 3(1):67-78 Yonath A High-resolution structures of large ribosomal subunits from mesophilic eubacteria and halophilic archaea at various functional states	0	0
4	196 2002 CURRENT PROTEIN & PEPTIDE SCIENCE 3(1):79-91 Stark H Three-dimensional electron cryomicroscopy of ribosomes	0	0
4	197 2002 CURRENT PROTEIN & PEPTIDE SCIENCE 3(1):93-106 Wahl MC; Moller W Structure and function of the acidic ribosomal stalk proteins	0	0
2	198 2002 EMBO JOURNAL 21(5):1139-1147 Pintard L; Bujnicki JM; Lapeyre B; Bonnerot C MRM2 encodes a novel yeast mitochondrial 21S rRNA methyltransferase	2	0
2	199 2002 EMBO JOURNAL 21(10):2461-2471 Lafontaine DA; Norman DG; Lilley DMJ The global structure of the VS ribozyme	0	0
1	200 2002 FEBS LETTERS 512(1-3):209-212 Ramachandiran V; Kramer G; Horowitz PM; Hardesty B Single synonymous codon substitution eliminates pausing during chloramphenicol acetyl transferase synthesis on Escherichia coli ribosomes in vitro	0	0

Cited nodes	Nodes / Authors	GCS	LCS
2	201 2002 FEBS LETTERS 514(1):90-95 Szkaradkiewicz K; Nanninga M; Nesper-Brock M; Gerrits M; Erdmann VA; Sprinzl M RNA aptamers directed against release factor 1 from Thermus thermophilus	0	0
1	202 2002 GENES & DEVELOPMENT 16(19):2497-2508 Ishizuka A; Siomi MC; Siomi H A Drosophila fragile X protein interacts with components of RNAi and ribosomal proteins	0	0
2	203 2002 INDIAN JOURNAL OF CHEMISTRY SECTION A-INORGANIC BIO-INORGANIC PHYSICAL THEORETICAL & ANALYTICAL CHEMISTRY 41(1):54-64 Sosnick T; Pan T; Fang XW; Shelton V; Thiyagarajan P; Littrel K Metal ions and the thermodynamics and kinetics of tertiary RNA folding	0	0
1	204 2002 INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY 34(2):116-129 Conrad C; Rauhut R Ribonuclease III: new sense from nuisance	1	0
7	205 2002 IUBMB LIFE 53(2):85-98 Harris TK; Turner GJ Structural basis of perturbed pK(a) values of catalytic groups in enzyme active sites	0	0
3	206 2002 JOURNAL OF BACTERIOLOGY 184(18):5052-5057 Arkov AL; Hedenstierna KOF; Murgola EJ Mutational evidence for a functional connection between two domains of 23S rRNA in translation termination	0	0
5	207 2002 JOURNAL OF BACTERIOLOGY 184(20):5733-5745 Ma J; Campbell A; Karlin S Correlations between Shine-Dalgarno sequences and gene features such as predicted expression levels and operon structures	0	0
6	208 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(21):19095-19105 Schafer MA; Tastan AO; Patzke S; Blaha G; Spahn CMT; Wilson DN; Nierhaus KH Codon-anticodon interaction at the P site is a prerequisite for tRNA interaction with the small ribosomal subunit	0	0
2	209 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(27):24128-24134 Virumae K; Saarma U; Horowitz J; Remme J Functional importance of the 3 '-terminal adenosine of tRNA in ribosomal translation	0	0
2	210 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(39):35847-35852 Hirohawa G; Kiel MC; Muto A; Kawai G; Igarashi K; Kaji H; Kaji A Binding of ribosome recycling factor to ribosomes, comparison with tRNA	0	0
2	211 2002 JOURNAL OF CELL BIOLOGY 156(2):261-270 Haigh NG; Johnson AE A new role for BiP: closing the aqueous translocon pore during protein integration into the ER membrane	2	0
6	212 2002 JOURNAL OF MOLECULAR BIOLOGY 321(2):215-234 Mears JA; Cannone JJ; Stagg SM; Gutell RR; Agrawal RK; Harvey SC Modeling a minimal ribosome based on comparative sequence analysis	0	0
3	213 2002 JOURNAL OF MOLECULAR EVOLUTION 55(4):460-469 Misof B; Anderson CL; Buckley TR; Erpenbeck D; Rickert A; Misof K An empirical analysis of mt 16S rRNA covarion-like evolution in insects: Site-specific rate variation is clustered and frequently detected	0	0
2	214 2002 JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM 580():1-8 Ferreira R Molecular chirality and the constitution of our biota	0	0
1	215 2002 JOURNAL OF ORGANIC CHEMISTRY 67(6):1852-1865 Acharya P; Chattopadhyaya J The hydrogen bonding and hydration of 2 ' OH in adenosine and adenosine 3 '-ethyl phosphate	0	0
2	216 2002 JOURNAL OF PHARMACY AND PHARMACOLOGY 54(8):1019-1031 Maurel MC; Biard B; Moulinier C; Braz D; Nugier J; Chaumas I; Reboud-Ravaux M; Decout JL RNA-acting antibiotics: in-vitro selection of RNA aptamers for the design of new bioactive molecules less susceptible to bacterial resistance	0	0
4	217 2002 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 124(17):4617-4622 Morii T; Hagihara M; Sato SI; Makino K In vitro selection of ATP-binding receptors using a ribonucleopeptide complex	0	0
3	218 2002 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 124(30):8949-8957 Boero M; Terakura K; Tateno M Catalytic role of metal ion in the selection of competing reaction paths: A first principles molecular dynamics study of the enzymatic reaction in ribozyme	0	0
4	219 2002 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 124(38):11307-11314 Kumar JK; Oliver JS Proximity effects in monolayer films: Kinetic analysis of amide bond formation at the air-water interface using H-1 NMR spectroscopy	0	0
1	220 2002 JOURNAL OF THEORETICAL BIOLOGY 217(2):235-253 Stevenson DS Co-evolution of the genetic code and ribozyme replication	0	0
6	221 2002 MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS 66(3):460-+ Ganoza MC; Kiel MC; Aoki H Evolutionary conservation of reactions in translation	0	0
7	222 2002 MOLECULAR CELL 10(1):117-128 Hansen JL; Ippolito JA; Ban N; Nissen P; Moore PB; Steitz TA The structures of four macrolide antibiotics bound to the large ribosomal subunit	0	0
9	223 2002 MOLECULAR CELL 10(2):339-346 Katunin VI; Muth GW; Strobel SA; Wintermeyer W; Rodnina MV Important contribution to catalysis of peptide bond formation by a single ionizing group within the ribosome	1	1
1	224 2002 MOLECULAR MICROBIOLOGY 43(5):1309-1318 Camps M; Arrizabalaga G; Boothroyd J An rRNA mutation identifies the apicoplast as the target for clindamycin in Toxoplasma gondii	1	0
5	225 2002 NATURE 418(6894):214-221 Joyce GF The antiquity of RNA-based evolution	1	0
9	226 2002 NATURE 418(6894):222-228 Doudna JA; Cech TR The chemical repertoire of natural ribozymes	2	1
14	227 2002 NATURE 418(6894):229-235 Moore PB; Steitz TA The involvement of RNA in ribosome function	0	0
4	228 2002 NATURE 419(6903):171-174 Kramer G; Rauch T; Rist W; Vorderwulbecke S; Patzelt H; Schulze-Specking A; Ban N; Deuerling E; Bukau B L23 protein functions as a chaperone docking site on the ribosome	1	1
1	229 2002 NATURE BIOTECHNOLOGY 20(7):717-722 Hartig JS; Najafi-Shoushtari SH; Grune I; Yan A; Ellington AD; Famulok M Protein-dependent ribozymes report molecular interactions in real time	2	0
7	230 2002 NATURE STRUCTURAL BIOLOGY 9(3):225-230 Schmeing TM; Seila AC; Hansen JL; Freeborn B; Soukup JK; Scaringe SA; Strobel SA; Moore PB; Steitz TA A pre-translocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits	8	7
9	231 2002 NATURE STRUCTURAL BIOLOGY 9(10):716-718 Albanese V; Frydman J Where chaperones and nascent polypeptides meet	0	0
3	232 2002 NUCLEIC ACIDS RESEARCH 30(1):176-178 Szymanski M; Barciszewska MZ; Erdmann VA; Barciszewski J 5S ribosomal RNA database	1	0
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2	234 2002 NUCLEIC ACIDS RESEARCH 30(10):2162-2171 Ramaswamy K; Wei K; Suga H Minihelix-loop RNAs: minimal structures for aminoacylation catalysts	0	0
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3	236 2002 NUCLEIC ACIDS RESEARCH 30(11):2390-2397 Sanyal SC; Pal S; Chaudhuri S; DasGupta C 23S rRNA assisted folding of cytoplasmic malate dehydrogenase is distinctly different from its self-folding	0	0
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6	238 2002 NUCLEIC ACIDS RESEARCH 30(13):2950-2960 Fraternali F; Cavallo L Parameter optimized surfaces (POPS): analysis of key interactions and conformational changes in the ribosome	0	0
3	239 2002 NUCLEIC ACIDS RESEARCH 30(13):2961-2971 Zhang Y; Li ZJ; Pilch DS; Leibowitz MJ Pentamidine inhibits catalytic activity of group I intron Ca.LSU by altering RNA folding	0	0
4	240 2002 ORGANIC LETTERS 4(6):987-990 Ma ZK; Li LP; Rupp M; Zhang SM; Zhang XL Regioselective synthesis of bifunctional macrolides for probing ribosomal binding	0	0
1	241 2002 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 99(9):5942-5947 Lee SW; Berger SJ; Martinovic S; Pasa-Tolic L; Anderson GA; Shen YF; Zhao R; Smith RD Direct mass spectrometric analysis of intact proteins of the yeast large ribosomal subunit using capillary LC/FTICR	0	0
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12	245 2002 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 99(18):11670-11675 Hansen JL; Schmeing TM; Moore PB; Steitz TA Structural insights into peptide bond formation	0	0
3	246 2002 PROGRESS IN CHEMISTRY 14(4):263-272 Jiang M; Shen T; Xu HB; Liu CL The influences of metal ions on protein folding, recognition, self-assembly and biological functions	0	0
3	247 2002 PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 72 72():223-268 Cristofari G; Darlix JL The ubiquitous nature of RNA chaperone proteins	1	0
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5	250 2002 RNA-A PUBLICATION OF THE RNA SOCIETY 8(4):401-411 Semrad K; Green R Osmolytes stimulate the reconstitution of functional 50S ribosomes from in vitro transcripts of Escherichia coli 23S rRNA	0	0
1	251 2002 RNA-A PUBLICATION OF THE RNA SOCIETY 8(7):890-903 Starck SR; Roberts RW Puromycin oligonucleotides reveal steric restrictions for ribosome entry and multiple modes of translation inhibition	0	0
2	252 2002 SCIENCE 295(5561):1852-1858 Hartl FU; Hayer-Hartl M Protein folding - Molecular chaperones in the cytosol: from nascent chain to folded protein	16	2
3	253 2002 SCIENCE 296(5572):1473-1476 Zhuang XW; Kim H; Pereira MJB; Babcock HP; Walter NG; Chu S Correlating structural dynamics and function in single ribozyme molecules	2	2
5	254 2002 SCIENCE 297(5585):1345-1348 Pool MR; Stumm J; Fulga TA; Sinning I; Dobberstein B Distinct modes of signal recognition particle interaction with the ribosome	1	1
5	255 2002 SCIENCE 297(5588):1820-1821 Sachs MS; Geballe AP Sense and sensitivity - Controlling the ribosome	0	0
1	256 2002 SCIENCES DES ALIMENTS 22(1-2):5-21 Tailliez P; Beaud D; Ogier JC Molecular approaches for microbioal classification and ecology.	0	0
9	257 2002 TRENDS IN BIOCHEMICAL SCIENCES 27(7):344-351 Decatur WA; Fournier MJ rRNA modifications and ribosome function	0	0
5	258 2002 TRENDS IN BIOCHEMICAL SCIENCES 27(9):448-454 Harger JW; Meskauskas A; Dinman JD An 'integrated model' of programmed ribosomal frameshifting	0	0

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