Missing Links? Citation Matrix Graphs Glossary  HistCite Guide  About
Mon Apr 18 12:08:40 2005

Expression profiling reveals off-target gene regulation by RNAi
Jackson AL, Bartz SR, Schelter J, Kobayashi SV,
Burchard J, Mao M, Li B, Cavet G, Linsley PS
NATURE BIOTECHNOLOGY 21 (6): 635-637 JUN 2003
and the citing papers

Nodes: 206, Authors: 782, Journals: 102, Outer References: 5771, Words: 773
Collection span: 2003 - 2005
View: Overview. Sorted by year, source, volume, issue, page.
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
12711 2003 CELL 115 (2): 199-208
Schwarz DS; Hutvagner G; Du T; Xu ZS; Aronin N; et al.
Asymmetry in the assembly of the RNAi enzyme complex
54158
22292 2003 CELL 115 (2): 209-216
Khvorova A; Reynolds A; Jayasena SD
Functional siRNAs and rniRNAs exhibit strand bias
43123
31483 2003 CHEMBIOCHEM 4 (10): 928-935
Achenbach TV; Brunner B; Heermeier K
Oligonucleotide-based knockdown technologies: Antisense versus RNA interference
03
411054 2003 CHEMBIOCHEM 4 (10): 1033-1039
Conklin DS
RNA-interference-based silencing of mammalian gene expression
02
51595 2003 CHEMBIOCHEM 4 (11): 1129-1136
Arendt CW; Tang GL; Zilberstein A
Vector systems for the delivery of small interfering RNAs: Managing the RISC
00
61606 2003 CURRENT OPINION IN DRUG DISCOVERY & DEVELOPMENT 6 (4): 561-569
Lavery KS; King TH
Antisense and RNAi: Powerful tools in drug target discovery and validation
414
7187 2003 GENE THERAPY 10 (23): 1931-1932
Kolfschoten I; Agami R
RNA interference gene therapy - Allelic gene inactivation: pinpointing the problem
01
8148 2003 GENETIC ENGINEERING NEWS 23 (16): 32-32
Dorris D; Wardlaw S
Designing optimized small interfering RNAs - Assay tutorial: siRNA-Design algorithm determines susceptibility to RNA interference for target identification
00
91439 2003 JOURNAL OF BIOLOGICAL CHEMISTRY 278 (45): 44312-44319
Saxena S; Jonsson ZO; Dutta A
Small RNAs with imperfect match to endogenous mRNA repress translation - Implications for off-target activity of small inhibitory RNA in mammalian cells
1934
1015310 2003 JOURNAL OF BIOLOGICAL CHEMISTRY 278 (48): 47724-47730
Sommer U; Liu H; Doering TL
An alpha-1,3-mannosyltransferase of Cryptococcus neoformans
05
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
1117211 2003 JOURNAL OF BIOMEDICAL SCIENCE 10 (6): 607-616
Haasnoot J; Cupac D; Berkhout B
Inhibition of virus replication by RNA interference
14
1213812 2003 LANCET 362 (9393): 1401-1403
Wall NR; Shi Y
Small RNA: can RNA interference be exploited for therapy?
538
13117413 2003 LETTERS IN PEPTIDE SCIENCE 10 (3-4): 361-372
Azorsa DO; Mousses S; Caplen NJ
Gene silencing through RNA interference: Potential for therapeutics and functional genomics
00
1411214 2003 LETTERS IN PEPTIDE SCIENCE 10 (5-6): 437-445
Khanna S; Warnasuriya GD; Downward J; Naaby-Hansen S
RNAi and 2DE, a promising combination for analysis of phospho-signalling and substrate identification
00
1513515 2003 MOLECULAR CANCER RESEARCH 1 (12): 882-891
Michael MZ; O'Connor SM; Pellekaan NGV; Young GP; James RJ
Reduced accumulation of specific microRNAs in colorectal neoplasia
528
1616416 2003 MOLECULAR CELL 12 (3): 627-637
Aza-Blanc P; Cooper CL; Wagner K; Batalov S; Deveraux QL; et al.
Identification of modulators of TRAIL-induced apoptosis via RNAi-based phenotypic screening
1849
1711517 2003 NATURE 425 (6953): 10-12
Check E
Gene regulation: RNA to the rescue?
29
180818 2003 NATURE BIOTECHNOLOGY 21 (6): 635-637
Jackson AL; Bartz SR; Schelter J; Kobayashi SV; Burchard J; et al.
Expression profiling reveals off-target gene regulation by RNAi
205205
19310019 2003 NATURE BIOTECHNOLOGY 21 (12): 1457-1465
Scherer LJ; Rossi JJ
Approaches for the sequence-specific knockdown of mRNA
1143
2014120 2003 NATURE BIOTECHNOLOGY 21 (12): 1473-1479
Zeytun A; Jeromin A; Scalettar BA; Waldo GS; Bradbury ARM
Fluorobodies combine GFP fluorescence with the binding characteristics of antibodies
012
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
2117321 2003 NATURE REVIEWS CANCER 3 (10): 781-789
Brummelkamp TR; Bernards R
Innovation - New tools for functional mammalian cancer genetics
517
2216822 2003 NATURE REVIEWS DRUG DISCOVERY 2 (10): 831-838
Lindsay MA
Innovation - Target discovery
225
231223 2003 NATURE REVIEWS GENETICS 4 (7): 487-487
Flintoft L
A matter of trust
00
2412624 2003 NUCLEIC ACIDS RESEARCH 31 (22): 6444-6449
Pusch O; Boden D; Silbermann R; Lee F; Tucker L; et al.
Nucleotide sequence homology requirements of HIV-1-specific short hairpin RNA
610
2513325 2003 OLIGONUCLEOTIDES 13 (5): 313-324
Lou TF; Gray CW; Gray DM
The reduction of Raf-1 protein by phosphorothioate ODNs and siRNAs targeted to the same two mRNA sequences
01
2614326 2003 PLANT JOURNAL 36 (1): 114-121
Lawrence RJ; Pikaard CS
Transgene-induced RNA interference: a strategy for overcoming gene redundancy in polyploids to generate loss-of-function mutations
011
2718327 2003 PLANT JOURNAL 36 (6): 905-917
Ekengren SK; Liu YL; Schiff M; Dinesh-Kumar SP; Martin GB
Two MAPK cascades, NPR1, and TGA transcription factors play a role in Pto-mediated disease resistance in tomato
014
2819428 2003 TRENDS IN MOLECULAR MEDICINE 9 (9): 397-403
Lieberman J; Song E; Lee SK; Shankar P
Interfering with disease: opportunities and roadblocks to harnessing RNA interference
414
2957929 2004 ACTA BIOCHIMICA POLONICA 51 (2): 431-444
Nawrot B
Targeting BACE with small inhibitory nucleic acids - a future for Alzheimer's disease therapy?
00
3018230 2004 ANNALS OF HEMATOLOGY 83 (1): 1-8
Scherr M; Steinmann D; Eder M
RNA interference (RNAi) in hematology
01
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
31811731 2004 ANNALS OF MEDICINE 36 (7): 540-551
Barik S
Development of gene-specific double-stranded RNA drugs
00
3237932 2004 ARTHRITIS RESEARCH & THERAPY 6 (2): 78-85
Rutz S; Scheffold A
Towards in vivo application of RNA interference - new toys, old problems
01
3314133 2004 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 317 (4): 1037-1044
Chen SJ; Wang G; Makrigiorgos GM; Price BD
Stable siRNA-mediated silencing of ATM alters the transcriptional profile of HeLa cells
00
3413934 2004 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 318 (1): 289-296
Imamura T; Kanai F; Kawakami T; Amarsanaa J; Ijichi H; et al.
Proteomic analysis of the TGF-beta signaling pathway in pancreatic carcinoma cells using stable RNA interference to silence Smad4 expression
11
3544835 2004 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 319 (1): 256-263
Snove O; Holen T
Many commonly used siRNAs risk off-target activity
410
3654236 2004 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 319 (1): 264-274
Chalk AM; Wahlestedt C; Sonnhammer ELL
Improved and automated prediction of effective siRNA
36
3764037 2004 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 321 (1): 247-253
Saetrom P; Snove O
A comparison of SiRNA efficacy predictors
22
38124138 2004 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 325 (3): 769-773
Snove O; Nedland M; Fjeldstad SH; Humberset H; Birkeland OR; et al.
Designing effective siRNAs with off target control
00
3947239 2004 BIOCHEMICAL JOURNAL 380: 593-603
Medema RH
Optimizing RNA interference for application in mammalian cells
14
4013240 2004 BIOCHEMICAL JOURNAL 380: 611-616
Rangarajan S; Raj MLS; Hernandez JM; Grotewold E; Gopalan V
RNase P as a tool for disruption of gene expression in maize cells
01
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
4123941 2004 BIOCHEMISTRY 43 (7): 1921-1927
Liu YH; Braasch DA; Nulf CJ; Corey DR
Efficient and isoform-selective inhibition of cellular gene expression by peptide nucleic acids
17
421942 2004 BIOINFORMATICS 20 (3): 430-432
Levenkova N; Gu QJ; Rux JJ
Gene specific siRNA selector
33
4312343 2004 BIOLOGICAL PSYCHIATRY 55 (8): 785-788
Carter DA
Comprehensive strategies to study neuronal function in transgenic animal models
00
4412844 2004 BIOTECHNIQUES 36 (1): 74-+
Kojima SI; Vignjevic D; Borisy GG
Improved silencing vector co-expressing GFP and small hairpin RNA
02
4553445 2004 BIOTECHNIQUES 36 (4): 557-+
Scherer L; Rossi JJ
RNAi applications in mammalian cells
12
4625146 2004 BIOTECHNOLOGY AND BIOENGINEERING 88 (1): 121-132
Raab RM; Stephanopoulos G
Dynamics of gene silencing by RNA interference
00
4713347 2004 BIOTECHNOLOGY AND BIOENGINEERING 88 (7): 901-908
Mori K; Kuni-Karnochi R; Yarnane-Ohnuki N; Wakitani M; Yamano K; et al.
Engineering Chinese hamster ovary cells to maximize effector function of produced antibodies using FUT8 siRNA
00
4817448 2004 BLOOD 104 (4): 923-932
Ebert BL; Golub TR
Genomic approaches to hematologic malignancies
01
4915549 2004 BMC CANCER 4: Art. No. 44
Martinez N; Drescher B; Riehle H; Cullmann C; Vornlocher HP; et al.
The oncogenic fusion protein RUNX1-CBFA2T1 supports proliferation and inhibits senescence in t(8;21)-positive leukaemic cells
02
5023050 2004 BMC MOLECULAR BIOLOGY 5: Art. No. 9
Fish RJ; Kruithof EKO
Short-term cytotoxic effects and long-term instability of RNAi delivered using lentiviral vectors
01
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
5116551 2004 CANCER RESEARCH 64 (11): 3949-3957
Chen W; Lee JW; Cho SY; Fine HA
Proteasome-mediated destruction of the cyclin A/cyclin-dependent kinase 2 complex suppresses tumor cell growth in vitro and in vivo
03
52613252 2004 CELL 116 (2): 281-297
Bartel DP
MicroRNAs: Genomics, biogenesis, mechanism, and function
24213
5315353 2004 CELL DEATH AND DIFFERENTIATION 11 (8): 915-923
Chawla-Sarkar M; Bae SI; Reu FJ; Jacobs BS; Lindner DJ; et al.
Downregulation of Bcl-2, FLIP or IAPs (XIAP and survivin) by siRNAs sensitizes resistant melanoma cells to Apo2L/TRAIL-induced apoptosis
02
5444854 2004 CELLULAR AND MOLECULAR LIFE SCIENCES 61 (16): 2113-2124
Li Y; Wasser S; Lim SG; Tan TMC
Genome-wide expression profiling of RNA interference of hepatitis B virus gene expression and replication
00
5523855 2004 CLINICAL CANCER RESEARCH 10 (15): 4983-4990
Nosrati M; Li S; Bagheri S; Ginzinger D; Blackburn EH; et al.
Antitumor activity of systemically delivered ribozymes targeting murine telomerase RNA
02
5612956 2004 COMBINATORIAL CHEMISTRY & HIGH THROUGHPUT SCREENING 7 (7): 689-697
Zhang D; Baek SH; Ho A; Lee H; Jeong YS; et al.
Targeted degradation of proteins by small molecules: A novel tool for functional proteomics
00
5712457 2004 COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 75 (1): 67-73
Cui WW; Ning JC; Naik UP; Duncan MK
OptiRNAi, an RNAi design tool
11
58113758 2004 CURRENT MOLECULAR MEDICINE 4 (5): 507-517
Fuchs U; Damm-Welk C; Borkhardt A
Silencing of disease-related genes by small interfering RNAs
00
5936559 2004 CURRENT OPINION IN DRUG DISCOVERY & DEVELOPMENT 7 (2): 179-187
Kurreck J
Antisense and RNA interference approaches to target validation in pain research
01
6056460 2004 CURRENT OPINION IN GENETICS & DEVELOPMENT 14 (5): 470-476
Friedman A; Perrimon N
Genome-wide high-throughput screens in functional genomics
02
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
6138861 2004 CURRENT OPINION IN MOLECULAR THERAPEUTICS 6 (2): 129-135
Scherr M; Eder M
RNAi in functional genomics
11
6275862 2004 CURRENT OPINION IN MOLECULAR THERAPEUTICS 6 (2): 136-140
Nencioni A; Sandy P; Dillon C; Kissler S; Blume-Jensen P; et al.
RNA interference for the identification of disease-associated genes
02
6355863 2004 CURRENT OPINION IN MOLECULAR THERAPEUTICS 6 (2): 141-145
Berkhout B
RNA interference as an antiviral approach: Targeting HIV-1
04
6424164 2004 CURRENT OPINION IN MOLECULAR THERAPEUTICS 6 (4): 373-380
Boden D; Pusch O; Ramratnam B
HIV-1-specific RNA interference
00
6575265 2004 CURRENT OPINION IN MOLECULAR THERAPEUTICS 6 (5): 546-550
Jones SW; Lindsay MA
Overview of target validation and the impact of oligonucleotides
00
66116466 2004 CURRENT OPINION IN PHARMACOLOGY 4 (5): 522-527
Jones SW; de Souza PM; Lindsay MA
siRNA for gene silencing: a route to drug target discovery
01
6725767 2004 CURRENT PHARMACEUTICAL BIOTECHNOLOGY 5 (4): 349-354
Heidenreich O
Oncogene suppression by small interfering RNAs
11
68111468 2004 CURRENT PHARMACEUTICAL BIOTECHNOLOGY 5 (4): 361-368
Poliseno L; Mercatanti A; Citti L; Rainaldi G
RNA-based drugs: From RNA interference to short interfering RNAs
00
6919869 2004 CURRENT PHARMACEUTICAL BIOTECHNOLOGY 5 (5): 441-450
Banan M; Puri N
The ins and outs of RNAi in mammalian cells
00
7013170 2004 CYTOGENETIC AND GENOME RESEARCH 105 (2-4): 363-374
Zhu J; Lum PY; Lamb J; GuhaThakurta D; Edwards SW; et al.
An integrative genomics approach to the reconstruction of gene networks in segregating populations
01
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
7127871 2004 CYTOGENETIC AND GENOME RESEARCH 105 (2-4): 412-421
Prawitt D; Brixel L; Spangenberg C; Eshkind L; Heck R; et al.
RNAi knock-down mice: an emerging technology for post-genomic functional genetics
15
72310872 2004 CYTOGENETIC AND GENOME RESEARCH 105 (2-4): 422-434
Svoboda P
Long dsRNA and silent genes strike back : RNAi in mouse oocytes and early embryos
11
7342673 2004 DEVELOPMENTAL DYNAMICS 231 (3): 592-600
Rao M; Baraban JH; Rajaii F; Sockanathan S
In vivo comparative study of RNAi methodologies by in ovo electroporation in the chick embryo
00
7416174 2004 DRUG DISCOVERY TODAY 9 (22): 960-966
Stocks MR
Intrabodies: Production and promise
01
7567675 2004 DRUGS OF THE FUTURE 29 (7): 741-750
Sioud M
Therapeutic potential of small interfering RNAs
00
7613476 2004 EMBO REPORTS 5 (2): 183-188
Kong XC; Barzaghi P; Ruegg MA
Inhibition of synapse assembly in mammalian muscle in vivo by RNA interference
13
7742277 2004 ENVIRONMENTAL HEALTH PERSPECTIVES 112 (4): A210-A211
Stribinskis V; Ramos KS
Decoding the riddle: The dawn of RNAi for the study of gene-gene and gene-environment interactions
00
78515578 2004 EXPERIMENTAL GERONTOLOGY 39 (7): 985-998
Geley S; Muller C
RNAi: ancient mechanism with a promising future
00
79310079 2004 EXPERT OPINION ON BIOLOGICAL THERAPY 4 (3): 319-327
Devroe E; Silver PA
Therapeutic potential of retroviral RNAi vectors
16
8035780 2004 EXPERT OPINION ON BIOLOGICAL THERAPY 4 (4): 531-542
Ganju P; Hall J
Potential applications of siRNA for pain therapy
13
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
8147181 2004 EXPERT OPINION ON BIOLOGICAL THERAPY 4 (12): 1921-1929
Borkhardt A; Heidenreich O
RNA interference as a potential tool in the treatment of leukaemia
00
8215782 2004 FEBS LETTERS 560 (1-3): 210-214
Hung L; Kumar V
Specific inhibition of gene expression and transactivation functions of hepatitis B virus X protein and c-myc by small interfering RNAs
01
8368283 2004 GENE THERAPY 11 (16): 1241-1248
Caplen NJ
Gene therapy progress and prospects. Downregulating gene expression: the impact of RNA interference
03
8424484 2004 GENES & DEVELOPMENT 18 (9): 975-980
Martinez J; Tuschl T
RISC is a 5 ' phosphomonoester-producing RNA endonuclease
727
8527185 2004 GENES & DEVELOPMENT 18 (24): 3041-3054
Urist M; Tanaka T; Poyurovsky MV; Prives C
p73 induction after DNA damage is regulated by checkpoint kinases Chk1 and Chk2
00
8628986 2004 GENOME BIOLOGY 5 (1): Art. No. R1
Enright AJ; John B; Gaul U; Tuschl T; Sander C; et al.
MicroRNA targets in Drosophila
00
8763987 2004 GENOME BIOLOGY 5 (9): Art. No. 115
Lai EC
Predicting and validating microRNA targets
02
88416088 2004 HUMAN MOLECULAR GENETICS 13: R275-R288
Buckingham SD; Esmaeili B; Wood M; Sattelle DB
RNA interference: from model organisms towards therapy for neural and neuromuscular disorders
02
8916689 2004 INTERNATIONAL JOURNAL OF CANCER 112 (6): 994-1002
Wang XL; Wang MY; Amarzguioui M; Liu F; Fodstad O; et al.
Downregulation of tissue factor by RNA interference in human melanoma Lox-L cells reduces pulmonary metastasis in nude mice
00
9013190 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279 (16): 16657-16661
Huang FT; Khvorova A; Marshall W; Sorkin A
Analysis of clathrin-mediated endocytosis of epidermal growth factor receptor by RNA interference
013
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
9118691 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279 (40): 41975-41984
Chang TS; Cho CS; Park S; Yu SQ; Kang SW; et al.
Peroxiredoxin III, a mitochondrion-specific peroxidase, regulates apoptotic signaling by mitochondria
02
9223792 2004 JOURNAL OF CELL SCIENCE 117 (25): 6043-6051
Zhao XJ; McKillop-Smith S; Muller B
The human histone gene expression regulator HBP/SLBP is required for histone and DNA synthesis, cell cycle progression and cell proliferation in mitotic cells
00
9325793 2004 JOURNAL OF CLINICAL INVESTIGATION 114 (8): 1107-1116
Lee MD; She YH; Soskis MJ; Borella CP; Gardner JR; et al.
Human mitochondrial peptide deformylase, a new anticancer target of actinonin-based antibiotics
00
941116694 2004 JOURNAL OF DRUG TARGETING 12 (6): 315-340
Gilmore IR; Fox SP; Hollins AJ; Muhammad SB; Akhtar S
The design and exogenous delivery of siRNA for post-transcriptional gene silencing
00
9524195 2004 JOURNAL OF MOLECULAR BIOLOGY 342 (4): 1069-1076
Gibbons DL; Shashikant C; Hayday AC
A comparative analysis of RNA targeting strategies in the thymosin beta 4 gene
00
9632896 2004 JOURNAL OF MOLECULAR BIOLOGY 342 (4): 1077-1083
Zhang HF; Altman S
Inhibition of the expression of the human RNase P protein subunits Rpp21, Rpp25, Rpp29 by external guide sequences (EGSs) and siRNA
00
9766997 2004 JOURNAL OF MOLECULAR ENDOCRINOLOGY 33 (3): 545-557
Bantounas I; Phylactou LA; Uney JB
RNA interference and the use of small interfering RNA to study gene function in mammalian systems
00
9816698 2004 JOURNAL OF NEUROCHEMISTRY 88 (2): 257-265
Trulzsch B; Wood M
Applications of nucleic acid technology in the CNS
23
9914999 2004 JOURNAL OF THE NATIONAL CANCER INSTITUTE 96 (17): 1288-1299
Lovat PE; Di Sano F; Corazzari M; Fazi B; Donnorso RP; et al.
Gangliosides link the acidic sphingomyelinase-mediated induction of ceramide to 12-lipoxygenase-dependent apoptosis of neuroblastoma in response to fenretinide
02
100333100 2004 LANCET NEUROLOGY 3 (3): 145-149
Davidson BL; Paulson HL
Molecular medicine for the brain: silencing of disease genes with RNA interference
414
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
101237101 2004 MECHANISMS OF DEVELOPMENT 121 (9): 1137-1143
Nakamura H; Katahira T; Sato T; Watanabe Y; Funahashi J
Gain-and loss-of-function in chick embryos by electroporation
01
1027434102 2004 MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS 68 (3): 432-+
Wang QQ; Carmichael GG
Effects of length and location on the cellular response to double-stranded RNA
02
103299103 2004 MOLECULAR PHARMACOLOGY 66 (6): 1361-1371
Blancafort P; Segal DJ; Barbas CF
Designing transcription factor architectures for drug discovery
00
104150104 2004 MOLECULAR THERAPY 10 (1): 162-171
Uchida H; Tanaka T; Sasaki K; Kato K; Dehari H; et al.
Adenovirus-mediated transfer of siRNA against survivin induced apoptosis and attenuated tumor cell growth in vitro and in vivo
01
105130105 2004 NATURE 427 (6974): 541-544
Li T; Chang CY; Jin DY; Lin PJ; Khvorova A; et al.
Identification of the gene for vitamin K epoxide reductase
015
106210106 2004 NATURE 428 (6981): 375-+
Fraser A
RNA interference - Human genes hit the big screen
04
107330107 2004 NATURE 428 (6981): 431-437
Berns K; Hijmans EM; Mullenders J; Brummelkamp TR; Velds A; et al.
A large-scale RNAi screen in human cells identifies new components of the p53 pathway
2081
108130108 2004 NATURE 430 (6999): 569-573
Sayah DM; Sokolskaja E; Berthoux L; Luban J
Cyclophilin A retrotransposition into TRIM5 explains owl monkey resistance to HIV-1
011
10912101109 2004 NATURE 431 (7006): 371-378
Hannon GJ; Rossi JJ
Unlocking the potential of the human genome with RNA interference
422
11033110 2004 NATURE 432 (7014): 136-136
Check E
Hopes rise for RNA therapy as mouse study hits target
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
111222111 2004 NATURE 432 (7014): 173-178
Soutschek J; Akinc A; Bramlage B; Charisse K; Constien R; et al.
Therapeutic silencing of an endogenous gene by systemic administration of modified siRNAs
419
112330112 2004 NATURE 432 (7020): 1036-1040
Kittler R; Putz G; Pelletier L; Poser I; Heninger AK; et al.
An endoribonuclease-prepared siRNA screen in human cells identifies genes essential for cell division
12
113469113 2004 NATURE BIOTECHNOLOGY 22 (12): 1533-1537
Agrawal S; Kandimalla ER
Antisense and siRNA as agonists of Toll-like receptors
01
114130114 2004 NATURE BIOTECHNOLOGY 22 (12): 1579-1582
Heidel JD; Hu SW; Liu XF; Triche TJ; Davis ME
Lack of interferon response in animals to naked siRNAs
22
115128115 2004 NATURE GENETICS 36 (2): 183-189
Sen G; Wehrman TS; Myers JW; Blau HM
Restriction enzyme-generated siRNA (REGS) vectors and libraries
1218
11612196116 2004 NATURE REVIEWS DRUG DISCOVERY 3 (4): 318-329
Dorsett Y; Tuschl T
siRNAs: Applications in functional genomics and potential as therapeutics
935
1172102117 2004 NATURE REVIEWS GENETICS 5 (1): 11-22
Carpenter AE; Sabatini DM
Systematic genome-wide screens of gene function
621
1181102118 2004 NATURE REVIEWS GENETICS 5 (3): 190-201
Steinmetz LM; Davis RW
Maximizing the potential of functional genomics
09
1199127119 2004 NATURE REVIEWS GENETICS 5 (5): 355-365
Mittal V
Improving the efficiency of RNA interference in mammals
213
1201159120 2004 NATURE REVIEWS GENETICS 5 (7): 552-557
Hall J
Unravelling the general properties of siRNAs: strength in numbers and lessons from the past
15
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
121445121 2004 NATURE STRUCTURAL & MOLECULAR BIOLOGY 11 (7): 599-606
Haley B; Zamore PD
Kinetic analysis of the RNAi enzyme complex
518
122144122 2004 NEOPLASIA 6 (6): 786-795
Faltus T; Yuan JP; Zimmer B; Kramer A; Loibl S; et al.
Silencing of the HER2/neu gene by siRNA inhibits proliferation and induces apoptosis in HER2/neu-overexpressing breast cancer cells
00
123680123 2004 NEUROSCIENCE 126 (1): 1-7
Holen T; Mobbs CV
Lobotomy of genes: Use of RNA interference in neuroscience
02
124233124 2004 NUCLEIC ACIDS RESEARCH 32: W113-W120
Henschel A; Buchholz F; Habermann B
DEQOR: a web-based tool for the design and quality control of siRNAs
02
125421125 2004 NUCLEIC ACIDS RESEARCH 32: W124-W129
Naito Y; Yamada T; Ui-Tei K; Morishita S; Saigo K
siDirect: highly effective, target-specific siRNA design software for mammalian RNA interference
03
126120126 2004 NUCLEIC ACIDS RESEARCH 32 (1): Art. No. e3
Kohli M; Rago C; Lengauer C; Kinzler KW; Vogelstein B
Facile methods for generating human somatic cell gene knockouts using recombinant adeno-associated viruses
02
127125127 2004 NUCLEIC ACIDS RESEARCH 32 (3): 893-901
Hsieh AC; Bo RH; Manola J; Vazquez F; Bare O; et al.
A library of siRNA duplexes targeting the phosphoinositide 3-kinase pathway: determinants of gene silencing for use in cell-based screens
1520
128145128 2004 NUCLEIC ACIDS RESEARCH 32 (9): 2740-2750
Tanaka T; Tomaru Y; Nomura Y; Miura H; Suzuki M; et al.
Comprehensive search for HNF-1 beta-regulated genes in mouse hepatoma cells perturbed by transcription regulatory factor-targeted RNAi
01
129114129 2004 NUCLEIC ACIDS RESEARCH 32 (12): Art. No. e102
Mangeot PE; Cosset FL; Colas P; Mikaelian I
A universal transgene silencing method based on RNA interference
00
130347130 2004 NUCLEIC ACIDS RESEARCH 32 (15): 4609-4617
Hu XY; Hipolito S; Lynn R; Abraham V; Ramos S; et al.
Relative gene-silencing efficiencies of small interfering RNAs targeting sense and antisense transcripts from the same genetic locus
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
1311140131 2004 OLIGONUCLEOTIDES 14 (1): 49-64
Ravichandran LV; Dean NM; Marcusson EG
Use of antisense oligonucleotides in functional genomics and target validation
04
1321106132 2004 OLIGONUCLEOTIDES 14 (2): 130-146
Jepsen JS; Sorensen MD; Wengel J
Locked nucleic acid: A potent nucleic acid analog in therapeutics and biotechnology
05
133142133 2004 ONCOGENE 23 (49): 8158-8170
Gelman MS; Ye XK; Stull R; Suhy D; Jin L; et al.
Identification of cell surface and secreted proteins essential for tumor cell survival using a genetic suppressor element screen
00
134737134 2004 ONCOGENE 23 (51): 8376-8383
Downward J
Use of RNA interference libraries to investigate oncogenic signalling in mammalian cells
01
135832135 2004 ONCOGENE 23 (51): 8384-8391
Sachse C; Echeverri CJ
Oncology studies using siRNA libraries: the dawn of RNAi-based genomics
01
136962136 2004 ONCOGENE 23 (51): 8392-8400
Willingham AT; Deveraux QL; Hampton GM; Aza-Blanc P
RNAi and HTS: exploring cancer by systematic loss-of-function
01
137245137 2004 ONCOGENE 23 (52): 8464-8474
Xu XM; Wang D; Shen Q; Chen YQ; Wang MH
RNA-mediated gene silencing of the RON receptor tyrosine kinase alters oncogenic phenotypes of human colorectal carcinoma cells
00
138150138 2004 PHARMACEUTICAL RESEARCH 21 (1): 1-7
Schiffelers RM; Woodle MC; Scaria P
Pharmaceutical prospects for RNA interference
24
139213139 2004 PHARMACOGENOMICS 5 (3): 239-242
Jain KK
RNAi and siRNA
00
140124140 2004 PLANT PHYSIOLOGY 135 (2): 630-636
Henikoff S; Till BJ; Comai L
TILLING. Traditional mutagenesis meets functional genomics
09
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
1416127141 2004 PLOS BIOLOGY 2 (11): 1862-1879
John B; Enright AJ; Aravin A; Tuschl T; Sander C; et al.
Human MicroRNA targets
00
142134142 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101 (1): 245-250
Radu CG; Yang LV; Riedinger M; Au M; Witte ON
T cell chemotaxis to lysophosphatidylcholine through the G2A receptor
111
143137143 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101 (5): 1141-1146
Narasimhan S; Montgomery RR; DePonte K; Tschudi C; Marcantonio N; et al.
Disruption of Ixodes scapularis anticoagulation by using RNA interference
16
144129144 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101 (7): 1892-1897
Scacheri PC; Rozenblatt-Rosen O; Caplen NJ; Wolfsberg TG; Umayam L; et al.
Short interfering RNAs can induce unexpected and divergent changes in the levels of untargeted proteins in mammalian cells
2145
145420145 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101 (15): 5313-5314
Singer O; Yanai A; Verma IM
Silence of the genes
02
146156146 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101 (25): 9441-9446
Zhang Q; Fukuda M; Van Bockstaele E; Pascual O; Haydon PG
Synaptotagmin IV regulates glial glutamate release
07
147145147 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101 (26): 9774-9779
Wang N; Lan DB; Chen WG; Matsuura F; Tall AR
ATP-binding cassette transporters G1 and G4 mediate cellular cholesterol efflux to high-density lipoproteins
015
148132148 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101 (27): 9982-9987
Marks KM; Braun PD; Nolan GP
A general approach for chemical labeling and rapid, spatially controlled protein inactivation
05
149218149 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101 (41): 14883-14888
Hamar P; Song EW; Kokeny G; Chen A; Ouyang NT; et al.
Small interfering RNA targeting Fas protects mice against renal ischemia-reperfusion injury
14
1501228150 2004 PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY 84 (2-3): 151-182
Sharman G; Ghorbel M; Leroux M; Beaucourt S; Wong LF; et al.
Deciphering the mechanisms of homeostatic plasticity in the hypothalamo-neurohypophyseal system - genomic and gene transfer strategies
01
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
151151151 2004 REGULATORS OF G-PROTEIN SIGNALING, PART A 389: 244-265
Wang Q; Liu M; Kozasa T; Rothestein JD; Sternweis PC; et al.
Ribozyme-and siRNA-mediated suppression of RGS-containing RhoGEF proteins
00
152122152 2004 RNA-A PUBLICATION OF THE RNA SOCIETY 10 (1): 12-18
Persengiev SP; Zhu XC; Green MR
Nonspecific, concentration-dependent stimulation and repression of mammalian gene expression by small interfering RNAs (siRNAs)
3047
153375153 2004 RNA-A PUBLICATION OF THE RNA SOCIETY 10 (3): 544-550
Meister G; Landthaler M; Dorsett Y; Tuschl T
Sequence-specific inhibition of microRNA-and siRNA-induced RNA silencing
317
154224154 2004 SCIENCE 304 (5670): 594-596
Yekta S; Shih IH; Bartel DP
MicroRNA-directed cleavage of HOXB8 mRNA
757
155215155 2004 SCIENTIST 18 (6): 32-35
Adams A
RNAi inches toward the clinic
00
156334156 2004 TRENDS IN BIOTECHNOLOGY 22 (8): 390-394
Paroo Z; Corey DR
Challenges for RNAi in vivo
12
157216157 2004 TRENDS IN BIOTECHNOLOGY 22 (9): 451-454
Gong DQ; Ferrell JE
Picking a winner: new mechanistic insights into the design of effective siRNAs
12
158614158 2004 TRENDS IN GENETICS 20 (11): 521-524
Jackson AL; Linsley PS
Noise amidst the silence: off-target effects of siRNAs?
36
159861159 2004 TRENDS IN GENETICS 20 (12): 617-624
Xu PZ; Guo M; Hay BA
MicroRNAs and the regulation of cell death
01
160165160 2004 TRENDS IN PHARMACOLOGICAL SCIENCES 25 (1): 22-28
Sioud M
Therapeutic siRNAs
414
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
161275161 2004 VIROLOGY 323 (2): 173-181
Radhakrishnan SK; Layden TJ; Gartel AL
RNA interference as a new strategy against viral hepatitis
07
162131162 2004 VIROLOGY 325 (1): 18-23
Karlas A; Kurth R; Denner J
Inhibition of porcine endogenous retroviruses by RNA interference: increasing the safety of xenotransplantation
02
163160163 2004 VIRUS RESEARCH 102 (1): 27-35
Barik S
Control of nonsegmented negative-strand RNA virus replication by siRNA
23
16412114164 2005 ANNUAL REVIEW OF MEDICINE 56: 401-423
Dykxhoorn DM; Lieberman J
The silent revolution: RNA interference as basic biology, research tool, and therapeutic
01
165131165 2005 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 328 (4): 1034-1042
Mise-Omata S; Obata Y; Iwase S; Mise N; Doi TS
Transient strong reduction of PTEN expression by specific RNAi induces loss of adhesion of the cells
00
166219166 2005 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 329 (3): 1026-1030
Li ZY; Mao HB; Kallick DA; Gorenstein DG
The effects of thiophosphate substitutions on native siRNA gene silencing
00
167138167 2005 BIOINFORMATICS 21 (6): 765-773
Rice JJ; Tu Y; Stolovitzky G
Reconstructing biological networks using conditional correlation analysis
00
168255168 2005 BLOOD 105 (3): 1127-1134
Yang LV; Radu CG; Wang L; Riedinger M; Witte ON
G(i)-independent macrophage chemotaxis to lysophosphatidylcholine via the immunoregulatory GPCR G2A
00
169276169 2005 BMC BIOTECHNOLOGY 5: Art. No. 6
Rusconi F; Durand-Dubief M; Bastin P
Functional complementation of RNA interference mutants in trypanosomes
00
170142170 2005 CANCER RESEARCH 65 (6): 2353-2363
Purow BW; Haque RM; Noel MW; Su Q; Burdick MJ; et al.
Expression of Notch-1 and its ligands, Delta-like-1 and Jagged-1, is critical for glioma cell survival and proliferation
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
171868171 2005 CHEMBIOCHEM 6 (2): 441-443
Westhof E; Filipowicz W
From RNAi to epigenomes: How RNA rules the world
00
172419172 2005 CHEMISTRY & INDUSTRY (4): 16-18
Suhy D; Ammini C; Cunningham S
Breakthrough for therapeutics
00
173382173 2005 CURRENT DRUG TARGETS 6 (1): 21-29
Forte A; Cipollaro M; Cascino A; Galderisi U
Small interfering RNAs and antisense oligonucleotides for treatment of neurological diseases
00
1748109174 2005 CURRENT OPINION IN DRUG DISCOVERY & DEVELOPMENT 8 (2): 262-269
Scherr M; Eder M
Modulation of gene expression by siRNA in hematopoietic cells
00
175260175 2005 DRUG DISCOVERY TODAY 10 (1): 53-60
Jackson RD; Harrington JI
High-throughput target discovery using cell-based genetics
00
176683176 2005 DRUG DISCOVERY TODAY 10 (3): 205-212
Vanhecke D; Janitz M
Functional genomics using high-throughput RNA interference
00
177182177 2005 EXPERIMENTAL GERONTOLOGY 40 (1-2): 17-26
Davis T; Skinner JW; Faragher RGA; Jones CJ; Kipling D
Replicative senescence in sheep fibroblasts is a p53 dependent process
00
178229178 2005 FEBS LETTERS 579 (1): 173-178
Rippmann JF; Schnapp A; Weith A; Hobbie S
Gene silencing with STAT6 specific siRNAs blocks eotaxin release in IL-4/TNF alpha stimulated human epithelial cells
00
179385179 2005 GENE THERAPY 12 (1): 5-11
Ryther RCC; Flynt AS; Phillips JA; Patton JG
siRNA therapeutics: Big potential from small RNAs
01
180245180 2005 GENE THERAPY 12 (3): 246-251
Golzio M; Mazzolini L; Moller P; Rols MP; Teissie J
Inhibition of gene expression in mice muscle by in vivo electrically mediated siRNA delivery
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
1819185181 2005 GENES & DEVELOPMENT 19 (5): 517-529
Tomari Y; Zamore PD
Perspective: machines for RNAi
00
182132182 2005 JOURNAL OF BIOLOGICAL CHEMISTRY 280 (1): 826-831
Futami T; Miyagishi M; Taira K
Identification of a network involved in thapsigargin-induced apoptosis using a library of small interfering RNA expression vectors
00
183159183 2005 JOURNAL OF BIOLOGICAL CHEMISTRY 280 (9): 7519-7529
Rubin BB; Downey GP; Koh A; Degousee N; Ghomashchi F; et al.
Cytosolic phospholipase A2-alpha is necessary for platelet-activating factor biosynthesis, efficient neutrophil-mediated bacterial killing, and the innate immune response to pulmonary infection - Cpla2-alpha does not regulate neutrophil NADPH oxidase activity
00
184164184 2005 JOURNAL OF CELL SCIENCE 118 (2): 397-408
Feijoo C; Campbell DG; Jakes R; Goedert M; Cuenda A
Evidence that phosphorylation of the microtubule-associated protein Tau by SAPK4/p38 delta at Thr50 promotes microtubule assembly
00
185236185 2005 JOURNAL OF GENE MEDICINE 7 (2): 198-207
Hassani Z; Lemkine GF; Erbacher P; Palmier K; Alfama G; et al.
Lipid-mediated siRNA delivery down-regulates exogenous gene expression in the mouse brain at picomolar levels
00
186243186 2005 JOURNAL OF NEUROCHEMISTRY 92 (2): 362-367
Xia XG; Zhou HX; Zhou S; Yu YP; Wu R; et al.
An RNAi strategy for treatment of amyotrophic lateral sclerosis caused by mutant Cu,Zn superoxide dismutase
01
187356187 2005 JOURNAL OF NEUROCHEMISTRY 92 (5): 1243-1255
Bahi A; Boyer F; Kolira M; Dreyer JL
In vivo gene silencing of CD81 by lentiviral expression of small interference RNAs suppresses cocaine-induced behaviour
00
188336188 2005 JOURNAL OF NEUROSCIENCE RESEARCH 79 (5): 661-669
Bantounas I; Glover CP; Kelly S; Iseki S; Phylactou LA; et al.
Assessing adenoviral hammerhead ribozyme and small hairpin RNA cassettes in neurons: Inhibition of endogenous caspase-3 activity and protection from apoptotic cell death
00
189539189 2005 JOURNAL OF VIROLOGY 79 (2): 1027-1035
Gitlin L; Stone JK; Andino R
Poliovirus escape from RNA interference: Short interfering RNA-target recognition and implications for therapeutic approaches
00
190339190 2005 LIVER INTERNATIONAL 25 (1): 9-15
Arbuthnot P; Carmona S; Ely A
Exploiting the RNA interference pathway to counter hepatitis B virus replication
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
191335191 2005 MOLECULAR & CELLULAR PROTEOMICS 4 (1): 44-55
Machuy N; Thiede B; Rajalingam K; Dimmler C; Thieck O; et al.
A global approach combining proteome analysis and phenotypic screening with RNA interference yields novel apoptosis regulators
00
1921056192 2005 MOLECULAR CELL 17 (1): 1-10
Huppi K; Martin SE; Caplen NJ
Defining and assaying RNAi in mammalian cells
00
193730193 2005 NATURE 433 (7027): 769-773
Lim LP; Lau NC; Garrett-Engele P; Grimson A; Schelter JM; et al.
Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs
01
194328194 2005 NATURE BIOTECHNOLOGY 23 (2): 222-226
Kim DH; Behlke MA; Rose SD; Chang MS; Choi S; et al.
Synthetic dsRNA Dicer substrates enhance RNAi potency and efficacy
03
195430195 2005 NATURE BIOTECHNOLOGY 23 (2): 227-231
Siolas D; Lerner C; Burchard J; Ge W; Linsley PS; et al.
Synthetic shRNAs as potent RNAi triggers
02
196445196 2005 NATURE MEDICINE 11 (1): 50-55
Bitko V; Musiyenko A; Shulyayeva O; Barik S
Inhibition of respiratory viruses by nasally administered siRNA
02
19734197 2005 NATURE METHODS 2 (4): 241-241
Fedorov Y; King A; Anderson E; Karpilow J; Ilsley D; et al.
Different delivery methods - different expression profiles
00
198617198 2005 NUCLEIC ACIDS RESEARCH 33: D108-D111
Truss M; Swat M; Kielbasa SM; Schafer R; Herzel H; et al.
HuSiDa-the human siRNA database: an open-access database for published functional siRNA sequences and technical details of efficient transfer into recipient cells
00
199432199 2005 NUCLEIC ACIDS RESEARCH 33 (1): 439-447
Elmen J; Thonberg H; Ljungberg K; Frieden M; Westergaard M; et al.
Locked nucleic acid (LNA) mediated improvements in siRNA stability and functionality
00
200236200 2005 ONCOGENE 24 (4): 662-671
Jazag A; Ijichi H; Kanai F; Imamura T; Guleng B; et al.
Smad4 silencing in pancreatic cancer cell lines using stable RNA interference and gene expression profiles induced by transforming growth factor-beta
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
201411201 2005 PHARMACOGENOMICS 6 (1): 1-4
Samarsky DA; Welch PJ
RNAi specificity: how big of an issue is it?
00
202422202 2005 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 102 (7): 2356-2361
Chen MH; Zhang LS; Zhang HY; Xiong XH; Wang B; et al.
A universal plasmid library encoding all permutations of small interfering RNA
00
203741203 2005 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 102 (7): 2396-2401
Kittler R; Pelletier L; Ma CL; Poser I; Fischer S; et al.
RNA interference rescue by bacterial artificial chromosome transgenesis in mammalian tissue culture cells
00
20427204 2005 SCIENTIST 19 (1): 28-29
Adams A
RNA therapeutics enter clinical trials
01
205127205 2005 TRENDS IN IMMUNOLOGY 26 (2): 65-68
Grubman MJ; de los Santos T
Rapid control of foot-and-mouth disease outbreaks: is RNAi a possible solution?
00
206369206 2005 TRENDS IN MOLECULAR MEDICINE 11 (3): 104-113
Lu PY; Xie FY; Woodle MC
Modulation of angiogenesis with siRNA inhibitors for novel therapeutics
00

Generated by: HistCite 2005.04.07