| # | Cited
nodes | Nodes / Authors | GCS | LCS |
| 1 | 2 | 1 2002 ACTA BIOCHIMICA ET BIOPHYSICA SINICA 34(5):544-546
Zhang XM; Wei KH; Yang SC
Application of bio-mass spectrometry in cellular signal transduction | 0 | 0
|
| 2 | 1 | 2 2002 ACTA PHYSICA POLONICA A 101(5):635-646
Wilmanns M
Structural genomics in Europe and beyond - Shifting scientific directions at EMBL Hamburg | 0 | 0
|
| 3 | 1 | 3 2002 ANALYTICAL CHEMISTRY 74(15):413A-419A
Figeys D
Proteomics approaches in drug discovery | 0 | 0
|
| 4 | 1 | 4 2002 ANALYTICAL CHEMISTRY 74(18):4725-4733
Natsume T; Yamauchi Y; Nakayama H; Shinkawa T; Yanagida M; Takahashi N; Isobe T
A direct nanoflow liquid chromatography - Tandem system for interaction proteomics | 2 | 0
|
| 5 | 1 | 5 2002 ANALYTICAL CHEMISTRY 74(20):5383-5392
Keller A; Nesvizhskii AI; Kolker E; Aebersold R
Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search | 7 | 2
|
| 6 | 1 | 6 2002 ANNUAL REPORTS IN MEDICINAL CHEMISTRY, VOL 37 37():187-196
Weir MP; Overington JP; Schwarz M
Expanding and exploring cellular pathways for novel drug targets | 0 | 0
|
| 7 | 1 | 7 2002 ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS 3():153-178
Reinke V; White KP
Developmental genomic approaches in model organisms | 1 | 0
|
| 8 | 1 | 8 2002 APPLIED SPECTROSCOPY REVIEWS 37(3):275-303
Stump MJ; Fleming RC; Gong WH; Jaber AJ; Jones JJ; Surber CW; Wilkins CL
Matrix-assisted laser desorption mass spectrometry | 0 | 0
|
| 9 | 1 | 9 2002 ARBOR-CIENCIA PENSAMIENTO Y CULTURA 172(677):167-218
Sandin M
Towards a new biology | 0 | 0
|
| 10 | 1 | 10 2002 BIOCHEMICAL PHARMACOLOGY 64(5-6):919-923
Urnov FD; Rebar EJ
Designed transcription factors as tools for therapeutics and functional genomics | 2 | 0
|
| 11 | 1 | 11 2002 BIOCHEMISTRY 41(42):12729-12738
Fujiwara K; Poikonen K; Aleman L; Valtavaara M; Saksela K; Mayer BJ
A single-chain antibody/epitope system for functional analysis of protein-protein interactions | 0 | 0
|
| 12 | 1 | 12 2002 BIOFUTUR ():28-38
Garin J
Proteomic analysis, cell exploration and annotation | 0 | 0
|
| 13 | 2 | 13 2002 BIOTECHNIQUES 33(6):1308-1316
Michaud GA; Snyder M
Proteomic approaches for the global analysis of proteins | 0 | 0
|
| 14 | 2 | 14 2002 BMC BIOINFORMATICS 3():art. no.-34
Steffen M; Petti A; Aach J; D'haeseleer P; Church G
Automated modelling of signal transduction networks | 1 | 0
|
| 15 | 3 | 15 2002 BMC BIOINFORMATICS 3():art. no.-35
Robinson MD; Grigull J; Mohammad N; Hughes TR
FunSpec: a web-based cluster interpreter for yeast | 0 | 0
|
| 16 | 1 | 16 2002 BMC GENOMICS 3():art. no.-18
Garbarino JE; Gibbons IR
Expression and genomic analysis of midasin, a novel and highly conserved AAA protein distantly related to dynein | 1 | 0
|
| 17 | 1 | 17 2002 CELL 109(5):563-573
Saitoh S; Chabes A; McDonald WH; Thelander L; Yates JR; Russell P
Cid13 is a cytoplasmic poly(A) polymerase that regulates ribonucleotide reductase mRNA | 9 | 0
|
| 18 | 1 | 18 2002 CELL 110(2):261-271
Lomvardas S; Thanos D
Modifying gene expression programs by altering core promoter chromatin architecture | 7 | 0
|
| 19 | 1 | 19 2002 CELL 111(1):17-28
Rutter J; Probst BL; McKnight SL
Coordinate regulation of sugar flux and translation by PAS kinase | 4 | 0
|
| 20 | 1 | 20 2002 CELL MOTILITY AND THE CYTOSKELETON 52(3):161-173
Valouev IA; Kushnirov VV; Ter-Avanesyan MD
Yeast polypeptide chain release factors eRF1 and eRF3 are involved in cytoskeleton organization and cell cycle regulation | 1 | 0
|
| 21 | 1 | 21 2002 CELLULAR AND MOLECULAR BIOLOGY 48(6):593-599
Christen Y; Olano-Martin E; Packer L
EGb 761 in the postgenomic era: New tools from molecular biology for the study of complex products such as Ginkgo biloba extract | 1 | 0
|
| 22 | 1 | 22 2002 CHEMBIOCHEM 3(11):1135-1137
Chin JW; Schultz PG
In vivo photocrosslinking with unnatural amino acid mutagenesis | 1 | 0
|
| 23 | 2 | 23 2002 CHEMISTRY & BIOLOGY 9(11):1167-1173
Bernstein BE; Schreiber SL
Global approaches to chromatin | 0 | 0
|
| 24 | 1 | 24 2002 CHEMISTRY IN BRITAIN 38(3):24-25
Gross M
Fishing for protein swarms | 0 | 0
|
| 25 | 2 | 25 2002 COMPARATIVE AND FUNCTIONAL GENOMICS 3(3):221-225
[Anon]
Upstream - news in genomics | 0 | 0
|
| 26 | 1 | 26 2002 COMPARATIVE AND FUNCTIONAL GENOMICS 3(3):270-276
Russell R
Meeting review: Bioinformatics and medicine - From molecules to humans, virtual and real - Hinxton Hall Conference Centre, Genome Campus, Hinxton, Cambridge, UK - April 5th-7th | 0 | 0
|
| 27 | 2 | 27 2002 CURRENT BIOLOGY 12(23):1992-2001
Zhang J; Schneider C; Ottmers L; Rodriguez R; Day A; Markwardt J; Schneider BL
Genomic scale mutant hunt identifies cell size homeostasis genes in S-cerevisiae | 0 | 0
|
| 28 | 1 | 28 2002 CURRENT BIOLOGY 12(24):2098-2110
Seshan A; Bardin AJ; Amon A
Control of Lte1 localization by cell polarity determinants and Cdc14 | 1 | 0
|
| 29 | 2 | 29 2002 CURRENT GENETICS 42(2):73-84
Sunnerhagen P
Prospects for functional genomics in Schizosaccharomyces pombe | 0 | 0
|
| 30 | 1 | 30 2002 CURRENT OPINION IN CELL BIOLOGY 14(2):173-179
Zhu H; Snyder M
'Omic' approaches for unraveling signaling networks | 7 | 1
|
| 31 | 1 | 31 2002 CURRENT OPINION IN CELL BIOLOGY 14(3):313-318
Fatica A; Tollervey D
Making ribosomes | 15 | 4
|
| 32 | 1 | 32 2002 CURRENT OPINION IN CHEMICAL BIOLOGY 6(4):418-426
Quinn-Senger KE; Ramachandran R; Rininger JA; Kelly KM; Lewin DA
Staking out novelty on the genomic frontier | 0 | 0
|
| 33 | 2 | 33 2002 CURRENT OPINION IN CHEMICAL BIOLOGY 6(5):666-675
Mo WJ; Karger BL
Analytical aspects of mass spectrometry and proteomics | 0 | 0
|
| 34 | 1 | 34 2002 CURRENT OPINION IN DRUG DISCOVERY & DEVELOPMENT 5(2):225-244
Singh SB; Lingham RB
Current progress on farnesyl protein transferase inhibitors | 3 | 0
|
| 35 | 1 | 35 2002 CURRENT OPINION IN DRUG DISCOVERY & DEVELOPMENT 5(5):683-689
DeFife KM; Wong-Staal F
Integrated approaches to therapeutic target gene discovery | 0 | 0
|
| 36 | 1 | 36 2002 CURRENT OPINION IN GENETICS & DEVELOPMENT 12(2):127-129
Elgin SCR; Workman JL
A year dominated by histone modifications, transitory and remembered - Editorial overview | 1 | 0
|
| 37 | 1 | 37 2002 CURRENT OPINION IN MICROBIOLOGY 5(5):466-471
Jiang B; Bussey H; Roemer T
Novel strategies in antifungal lead discovery | 1 | 0
|
| 38 | 1 | 38 2002 CURRENT OPINION IN MOLECULAR THERAPEUTICS 4(3):210-215
Figeys D
Functional proteomics: Mapping protein-protein interactions and pathways | 3 | 2
|
| 39 | 1 | 39 2002 CURRENT OPINION IN MOLECULAR THERAPEUTICS 4(3):251-258
Rohlff C; Southan C
Proteomic approaches to central nervous system disorders | 0 | 0
|
| 40 | 3 | 40 2002 CURRENT OPINION IN MOLECULAR THERAPEUTICS 4(6):594-600
Strosberg AD
Protein interaction mapping for target validation: The need for an integrated combinatory process involving complementary approaches | 0 | 0
|
| 41 | 2 | 41 2002 CURRENT OPINION IN STRUCTURAL BIOLOGY 12(3):368-373
Valencia A; Pazos F
Computational methods for the prediction of protein interactions | 1 | 0
|
| 42 | 1 | 42 2002 CURRENT OPINION IN STRUCTURAL BIOLOGY 12(6):729-734
Sobott F; Robinson CV
Protein complexes gain momentum | 0 | 0
|
| 43 | 1 | 43 2002 DEVELOPMENTAL CELL 3(6):825-837
Shintani T; Huang WP; Stromhaug PE; Klionsky DJ
Mechanism of cargo selection in the cytoplasm to vacuole targeting pathway | 2 | 0
|
| 44 | 1 | 44 2002 DISEASE MARKERS 18(2):99-105
McDonald WH; Yates JR
Shotgun proteomics and biomarker discovery | 2 | 0
|
| 45 | 1 | 45 2002 DRUG DISCOVERY TODAY 7(11):S48-S54
Schachter V
Protein-interaction networks: from experiments to analysis | 1 | 0
|
| 46 | 1 | 46 2002 DRUG DISCOVERY TODAY 7(18):S125-S130
Tucker CL
High-throughput cell-based assays in yeast | 0 | 0
|
| 47 | 1 | 47 2002 EMBO JOURNAL 21(10):2496-2506
Sironi L; Mapelli M; Knapp S; De Antoni A; Jeang KT; Musacchio A
Crystal structure of the tetrameric Mad1-Mad2 core complex: implications of 'safety belt' binding mechanism for the spindle checkpoint | 7 | 0
|
| 48 | 1 | 48 2002 EMBO JOURNAL 21(13):3516-3525
Ustrell V; Hoffman L; Pratt G; Rechsteiner M
PA200, a nuclear proteasome activator involved in DNA repair | 1 | 0
|
| 49 | 1 | 49 2002 EMBO JOURNAL 21(13):3526-3535
Jimeno S; Rondon AG; Luna R; Aguilera A
The yeast THO complex and mRNA export factors link RNA metabolism with transcription and genome instability | 6 | 0
|
| 50 | 1 | 50 2002 EMBO JOURNAL 21(20):5577-5585
Constantinou A; Chen XB; McGowan CH; West SC
Holliday junction resolution in human cells: two junction endonucleases with distinct substrate specificities | 3 | 0
|
| 51 | 1 | 51 2002 EUKARYOTIC CELL 1(5):673-686
Kohler T; Wesche S; Taheri N; Braus GH; Mosch HU
Dual role of the Saccharomyces cerevisiae TEA/ATTS family transcription factor Tec1p in regulation of gene expression and cellular development | 0 | 0
|
| 52 | 1 | 52 2002 EUROPEAN CYTOKINE NETWORK 13(3):276-284
Eyckerman S; Tavernier J
Methods to map protein interactions in mammalian cells: different tools to address different questions | 0 | 0
|
| 53 | 1 | 53 2002 FEBS LETTERS 527(1-3):186-192
Collister M; Didmon MP; MacIsaac F; Stark MJ; MacDonald NQ; Keyse SM
YIL113w encodes a functional dual-specificity protein phosphatase which specifically interacts with and inactivates the Slt2/Mpk1p MAP kinase in S-cerevisiae | 0 | 0
|
| 54 | 1 | 54 2002 FEBS LETTERS 529(1):11-16
Valpuesta JM; Martin-Benito J; Gomez-Puertas P; Carrascosa JL; Willison KR
Structure and function of a protein folding machine: the eukaryotic cytosolic chaperonin CCT | 2 | 1
|
| 55 | 1 | 55 2002 FEBS LETTERS 530(1-3):253-254
Aloy P; Russell RB
Potential artefacts in protein-interaction networks | 3 | 2
|
| 56 | 1 | 56 2002 FREE RADICAL BIOLOGY AND MEDICINE 33(1):15-28
Mitra S; Izumi T; Boldogh I; Bhakat KK; Hill JW; Hazra TK
Choreography of oxidative damage repair in mammalian genomes | 2 | 0
|
| 57 | 1 | 57 2002 GENE 288(1-2):19-27
West RW; Milgrom E
DEAD-box RNA helicase Sub2 is required for expression of lacZ fusions in Saccharomyces cerevisiae and is a dosage-dependent suppressor of RLR1 (THO2) | 0 | 0
|
| 58 | 1 | 58 2002 GENES & DEVELOPMENT 16(6):707-719
Kumar A; Agarwal S; Heyman JA; Matson S; Heidtman M; Piccirillo S; Umansky L; Drawid A; Jansen R; Liu Y; Cheung KH; Miller P; Gerstein M; Roeder GS; Snyder M
Subcellular localization of the yeast proteome | 35 | 17
|
| 59 | 1 | 59 2002 GENETICS 160(4):1423-1437
Williams-Hart T; Wu XL; Tatchell K
Protein phosphatase type 1 regulates ion homeostasis in Saccharomyces cerevisiae | 0 | 0
|
| 60 | 1 | 60 2002 GENETICS 162(3):1091-1099
Jorgensen P; Nelson B; Robinson MD; Chen YQ; Andrews B; Tyers M; Boone C
High-resolution genetic mapping with ordered arrays of Saccharomyces cerevisiae deletion mutants | 0 | 0
|
| 61 | 1 | 61 2002 GENOME RESEARCH 12(8):1231-1245
Rappsilber J; Ryder U; Lamond AI; Mann M
Large-scale proteomic analysis of the human splicesome | 15 | 3
|
| 62 | 1 | 62 2002 INTERNATIONAL JOURNAL OF GYNECOLOGICAL CANCER 12(5):409-423
Wu W; Hu W; Kavanagh JJ
Proteomics in cancer research | 1 | 0
|
| 63 | 1 | 63 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(22):19783-19791
Lalioti VS; Vergarajauregui S; Pulido D; Sandoval IV
The insulin-sensitive glucose transporter, GLUT4, interacts physically with Daxx - Two proteins with capacity to bind Ubc9 and conjugated to SUMO1 | 1 | 0
|
| 64 | 1 | 64 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(25):22156-22167
Burchett SA; Flanary P; Aston C; Jiang LX; Young KH; Uetz P; Fields S; Dohlman HG
Regulation of stress response signaling by the N-terminal disshevelled/EGL-10/pleckstrin domain of Sst2, a regulator of G protein signaling in Saccharomyces cerevisiae | 2 | 0
|
| 65 | 1 | 65 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(29):26444-26451
Yamazaki K; Guo LM; Sugahara K; Zhang C; Enzan H; Nakabeppu Y; Kitajima S; Aso T
Identification and biochemical characterization of a novel transcription elongation factor, Elongin A3 | 1 | 0
|
| 66 | 1 | 66 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(47):45235-45242
Yang PK; Rotondo G; Porras T; Legrain P; Chanfreau G
The Shq1p center dot Naf1p complex is required for box H/ACA small nucleolar ribonucleoprotein particle biogenesis | 0 | 0
|
| 67 | 1 | 67 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(50):48002-48008
Chang JS; Henry K; Wolf BL; Geli M; Lemmon SK
Protein phosphatase-1 binding to Scd5p is important for regulation of actin organization and endocytosis in yeast | 0 | 0
|
| 68 | 1 | 68 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(51):50015-50021
Sahara T; Goda T; Ohgiya S
Comprehensive expression analysis of time-dependent genetic responses in yeast cells to low temperature | 0 | 0
|
| 69 | 1 | 69 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(52):50403-50408
Nath N; McCartney RR; Schmidt MC
Purification and characterization of Snf1 kinase complexes containing a defined beta subunit composition | 1 | 0
|
| 70 | 1 | 70 2002 JOURNAL OF CELL SCIENCE 115(20):3873-3878
Pinna LA
Protein kinase CK2: a challenge to canons | 8 | 0
|
| 71 | 1 | 71 2002 JOURNAL OF CHROMATOGRAPHY B 771(1-2):33-48
Wasinger VC; Corthals GL
Proteomic tools for biomedicine | 1 | 0
|
| 72 | 1 | 72 2002 JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES 782(1-2):151-163
Steinmetz LM; Deutschbauer AM
Gene function on a genomic scale | 0 | 0
|
| 73 | 1 | 73 2002 JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES 782(1-2):165-181
Hunter TC; Andon NL; Koller A; Yates JR; Haynes PA
The functional proteomics toolbox: methods and applications | 0 | 0
|
| 74 | 1 | 74 2002 JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES 782(1-2):385-392
Ruotolo BT; Gillig KJ; Stone EG; Russell DH
Peak capacity of ion mobility mass spectrometry: Separation of peptides in helium buffer gas | 0 | 0
|
| 75 | 1 | 75 2002 JOURNAL OF MOLECULAR BIOLOGY 324(1):177-192
Goh CS; Cohen FE
Co-evolutionary analysis reveals insights into protein-protein interactions | 1 | 0
|
| 76 | 3 | 76 2002 JOURNAL OF MOLECULAR BIOLOGY 324(3):399-407
Teichmann SA
The constraints protein-protein interactions place on sequence divergence | 0 | 0
|
| 77 | 2 | 77 2002 JOURNAL OF PEPTIDE RESEARCH 61(4):163-176
Gururaja TL; Li W; Payan DG; Anderson DC
Utility of peptide-protein affinity complexes in proteomics: identification of interaction partners of a tumor suppressor p21([141-160])(cipi/wafi) peptide | 0 | 0
|
| 78 | 1 | 78 2002 JOURNAL OF PROTEOME RESEARCH 1(1):15-19
Hunt DF
Personal commentary on proteomics | 1 | 0
|
| 79 | 1 | 79 2002 JOURNAL OF PROTEOME RESEARCH 1(2):181-187
Geoghegan KF; Hoth LR; Tan DH; Borzillerl KA; Withka JM; Boyd JG
Cyclization of N-terminal S-carbamoylmethylcysteine causing loss of 17 Da from peptides and extra peaks in peptide maps | 0 | 0
|
| 80 | 1 | 80 2002 JOURNAL OF PROTEOME RESEARCH 1(3):253-261
Gururaja T; Li WQ; Bernstein J; Payan DG; Anderson DC
Use of MEDUSA-based data analysis and capillary HPLC-ion-trap mass spectrometry to examine complex immunoaffinity extracts of RbAp48 | 2 | 2
|
| 81 | 1 | 81 2002 JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY 13(5):1398-1408
Knepper MA
Proteomics and the kidney | 4 | 0
|
| 82 | 2 | 82 2002 MASS SPECTROMETRY REVIEWS 21(5):305-348
Rusconi F; Guillonneau F; Praseuth D
Contributions of mass spectrometry in the study of nucleic acid-binding proteins and of nucleic acid-protein interactions | 0 | 0
|
| 83 | 1 | 83 2002 MOLECULAR & CELLULAR PROTEOMICS 1(6):421-433
Edmondson RD; Vondriska TM; Biederman KJ; Jun Z; Jones RC; Zheng YT; Allen DL; Xiu JX; Cardwell EM; Pisano MR; Ping PP
Protein kinase C epsilon signaling complexes include metabolism- and transcription/translation-related proteins - Complimentary separation techniques with LC/MS/MS | 0 | 0
|
| 84 | 1 | 84 2002 MOLECULAR & CELLULAR PROTEOMICS 1(6):434-450
Huang L; Baldwin MA; Maltby DA; Medzihradszky KF; Baker PR; Allen N; Rexach M; Edmondson RD; Campbell J; Juhasz P; Martin SA; Vestal ML; Burlingame AL
The identification of protein-protein interactions of the nuclear pore complex of Saccharomyces cerevisiae using high throughput matrix-assisted laser desorption ionization time-of- flight tandem mass spectrometry | 1 | 0
|
| 85 | 2 | 85 2002 MOLECULAR & CELLULAR PROTEOMICS 1(8):561-566
Ito T; Ota K; Kubota H; Yamaguchi Y; Chiba T; Sakuraba K; Yoshida M
Roles for the two-hybrid system in exploration of the yeast protein interactome | 1 | 1
|
| 86 | 1 | 86 2002 MOLECULAR AND CELLULAR BIOLOGY 22(13):4723-4738
Sanders SL; Jennings J; Canutescu A; Link AJ; Weil PA
Proteomics of the eukaryotic transcription machinery: Identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry | 17 | 5
|
| 87 | 1 | 87 2002 MOLECULAR AND CELLULAR BIOLOGY 22(14):5248-5256
Kufel J; Allmang C; Verdone L; Beggs JD; Tollervey D
Lsm proteins are required for normal processing of pre-tRNAs and their efficient association with La-homologous protein Lhp1p | 4 | 1
|
| 88 | 1 | 88 2002 MOLECULAR AND CELLULAR BIOLOGY 22(20):7053-7065
Dez C; Noaillac-Depeyre J; Caizergues-Ferrer M; Henry Y
Naf1p, an essential nucleoplasmic factor specifically required for acculmulation of box H/ACA small nucleolar RNPs | 0 | 0
|
| 89 | 2 | 89 2002 MOLECULAR AND CELLULAR BIOLOGY 22(23):8241-8253
Zenklusen D; Vinciguerra P; Wyss JC; Stutz F
Stable mRNP formation and export require cotranscriptional recruitment of the mRNA export factors Yra1p and Sub2p by Hpr1p | 2 | 1
|
| 90 | 2 | 90 2002 MOLECULAR AND CELLULAR BIOLOGY 22(23):8254-8266
Libri D; Dower K; Boulay J; Thomsen R; Rosbash M; Jensen TH
Interactions between mRNA export commitment, 3 '-end quality control, and nuclear degradation | 1 | 1
|
| 91 | 2 | 91 2002 MOLECULAR BIOLOGY REPORTS 29(3):265-280
Forst CV
Network genomics - A novel approach for the analysis of biological systems in the post-genomic era | 0 | 0
|
| 92 | 1 | 92 2002 MOLECULAR CANCER RESEARCH 1(2):103-112
Begley TJ; Rosenbach AS; Ideker T; Samson LD
Damage recovery pathways in Saccharomyces cerevisiae revealed by genomic phenotyping and interactome mapping | 0 | 0
|
| 93 | 1 | 93 2002 MOLECULAR CELL 9(5):1133-1143
Kemmeren P; van Berkum NL; Vilo J; Bijma T; Donders R; Brazma A; Holstege FCP
Protein interaction verification and functional annotation by integrated analysis of genome-scale data | 12 | 9
|
| 94 | 1 | 94 2002 MOLECULAR CELL 10(3):495-507
Leggett DS; Hanna J; Borodovsky A; Crosas B; Schmidt M; Baker RT; Walz T; Ploegh H; Finley D
Multiple associated proteins regulate proteasome structure and function | 4 | 0
|
| 95 | 1 | 95 2002 MOLECULAR CELL 10(5):1007-1017
Douangamath A; Filipp FV; Klein ATJ; Barnett P; Zou PJ; Voorn-Brouwer T; Vega MC; Mayans OM; Sattler M; Distel B; Wilmanns M
Topography for independent binding of alpha-helical and PPII- helical ligands to a peroxisomal SH3 domain | 0 | 0
|
| 96 | 1 | 96 2002 MOLECULAR CELL 10(6):1489-1494
Upadhya R; Lee JH; Willis IM
Maf1 is an essential mediator of diverse signals that repress RNA polymerase III transcription | 0 | 0
|
| 97 | 1 | 97 2002 NACHRICHTEN AUS DER CHEMIE 50(3):312-326
Cramer P; Rappsilber J; Mann M; Kroll W; Hartwig W; Schultz C
Biochemistry and molecular genetics 2001 | 0 | 0
|
| 98 | 1 | 98 2002 NACHRICHTEN AUS DER CHEMIE 50(9):990-993
Linscheid M
Mass spectrometry of biomolecules | 0 | 0
|
| 99 | 1 | 99 2002 NATURE 415(6868):123-124
Kumar A; Snyder M
Protein complexes take the bait | 10 | 7
|
| 100 | 0 | 100 2002 NATURE 415(6868):180-183
Ho Y; Gruhler A; Heilbut A; Bader GD; Moore L; Adams SL; Millar A; Taylor P; Bennett K; Boutilier K; Yang LY; Wolting C; Donaldson I; Schandorff S; Shewnarane J; Vo M; Taggart J; Goudreault M; Muskat B; Alfarano C; Dewar D; Lin Z; Michalickova K; Willems AR; Sassi H; Nielsen PA; Rasmussen KJ; Andersen JR; Johansen LE; Hansen LH; Jespersen H; Podtelejnikov A; Nielsen E; Crawford J; Poulsen V; Sorensen BD; Matthiesen J; Hendrickson RC; Gleeson F; Pawson T; Moran MF; Durocher D; Mann M; Hogue CWV; Figeys D; Tyers M
Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry | 217 | 217
|
| # | Cited
nodes | Nodes / Authors | GCS | LCS |
| 101 | 2 | 101 2002 NATURE 417(6887):399-403
von Mering C; Krause R; Snel B; Cornell M; Oliver SG; Fields S; Bork P
Comparative assessment of large-scale data sets of protein- protein interactions | 50 | 0
|
| 102 | 1 | 102 2002 NATURE 417(6892):894-896
Abbott A
Proteomics: The society of proteins | 3 | 2
|
| 103 | 1 | 103 2002 NATURE BIOTECHNOLOGY 20(2):128-129
Legrain P
Protein domain networking | 1 | 0
|
| 104 | 1 | 104 2002 NATURE BIOTECHNOLOGY 20(7):651-651
Aebersold R; Watts JD
The need for national centers for proteomics | 3 | 1
|
| 105 | 1 | 105 2002 NATURE BIOTECHNOLOGY 20(10):991-997
Bader GD; Hogue CWV
Analyzing yeast protein-protein interaction data obtained from different sources | 5 | 4
|
| 106 | 1 | 106 2002 NATURE CELL BIOLOGY 4(8):E203-E206
Bauman AL; Scott JD
Kinase- and phosphatase-anchoring proteins: harnessing the dynamic duo | 3 | 0
|
| 107 | 1 | 107 2002 NATURE GENETICS 32():526-532
MacBeath G
Protein microarrays and proteomics | 5 | 0
|
| 108 | 2 | 108 2002 NATURE REVIEWS GENETICS 3(2):86-87
Alfred J
... a complex web of interactions | 0 | 0
|
| 109 | 2 | 109 2002 NATURE REVIEWS GENETICS 3(9):653-661
Grunenfelder B; Winzeler EA
Treasures and traps in genome-wide data sets: Case examples from yeast | 4 | 1
|
| 110 | 1 | 110 2002 NATURE REVIEWS GENETICS 3(10):779-789
Badano JL; Katsanis N
Beyond Mendel: An evolving view of human genetic disease transmission | 3 | 0
|
| 111 | 1 | 111 2002 NATURE REVIEWS MOLECULAR CELL BIOLOGY 3(7):475-486
Kullander K; Klein R
Mechanisms and functions of EPH and ephrin signalling | 8 | 0
|
| 112 | 1 | 112 2002 NATURE STRUCTURAL BIOLOGY 9(3):153-153
[Anon]
Proteomics in a small world | 0 | 0
|
| 113 | 1 | 113 2002 NATURE STRUCTURAL BIOLOGY 9(10):719-724
Leung GC; Hudson JW; Kozarova A; Davidson A; Dennis JW; Sicheri F
The Sak polo-box comprises a structural domain sufficient for mitotic subcellular localization | 2 | 0
|
| 114 | 1 | 114 2002 NUCLEIC ACIDS RESEARCH 30(20):4361-4370
Dahan O; Kupiec M
Mutations in genes of Saccharomyces cerevisiae encoding pre- mRNA splicing factors cause cell cycle arrest through activation of the spindle checkpoint | 0 | 0
|
| 115 | 1 | 115 2002 PLANT MOLECULAR BIOLOGY 50(6):819-821
Roberts M; Denecke J; Collinge D
Untitled - Foreword | 0 | 0
|
| 116 | 2 | 116 2002 PROCEEDINGS OF THE IEEE 90(12):1848-1858
Lan N; Jansen R; Gerstein M
Toward a systematic definition of protein function that scales to the genome level: Defining function in terms of interactions | 0 | 0
|
| 117 | 1 | 117 2002 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 99(6):3746-3751
Zhao XL; Rothstein R
The Dun1 checkpoint kinase phosphorylates and regulates the ribonucleotide reductase inhibitor SmI1 | 8 | 2
|
| 118 | 1 | 118 2002 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 99(26):16513-16515
Michnick SW; Valois FXC
Gene function: Getting specific, generally speaking | 0 | 0
|
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Battogtokh D; Asch DK; Case ME; Arnold J; Schuttler HB
An ensemble method for identifying regulatory circuits with special reference to the qa gene cluster of Neurospora crassa | 1 | 0
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Chang M; Bellaoui M; Boone C; Brown GW
A genome-wide screen for methyl methanesulfonate-sensitive mutants reveals genes required for S phase progression in the presence of DNA damage | 1 | 0
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| 121 | 1 | 121 2002 PROTEOMICS 2(4):345-351
Laurell T; Marko-Varga G
Miniaturisation is mandatory unravelling the human proteome | 2 | 0
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| 122 | 1 | 122 2002 PROTEOMICS 2(4):373-382
Figeys D
Adapting arrays and lab-on-a-chip technology for proteomics | 4 | 0
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| 123 | 1 | 123 2002 PROTEOMICS 2(6):611-623
Auerbach D; Thaminy S; Hottiger MO; Stagljar I
The post-genomic era of interactive proteomics: Facts and perspectives | 5 | 1
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| 124 | 1 | 124 2002 RNA-A PUBLICATION OF THE RNA SOCIETY 8(12):1502-1514
Fatica A; Dlakic M; Tollervey D
Naf1p is a box H/ACA snoRNP assembly factor | 0 | 0
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Ronald P; Leung H
The rice genome - The most precious things are jade and pearls ... | 1 | 0
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Fraser HB; Hirsh AE; Steinmetz LM; Scharfe C; Feldman MW
Evolutionary rate in the protein interaction network | 14 | 3
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Jorgensen P; Nishikawa JL; Breitkreutz BJ; Tyers M
Systematic identification of pathways that couple cell growth and division in yeast | 13 | 4
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Speicher DW
Proteomics: An infinite problem with infinite potential | 2 | 0
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DeFrancesco L
Probing protein interactions | 0 | 0
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Furlan M
Sticky and promiscuous plasma proteins maintain the equilibrium between bleeding and thrombosis | 0 | 0
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Stagljar I; Fields S
Analysis of membrane protein interactions using yeast-based technologies | 0 | 0
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Aloy P; Russell RB
The third dimension for protein interactions and complexes | 1 | 1
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Flory MR; Griffin TJ; Martin D; Aebersold R
Advances in quantitative proteomics using stable isotope tags | 1 | 0
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Fenyo D; Beavis RC
Informatics and data management in proteomics | 0 | 0
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Teichmann SA; Babu MM
Conservation of gene co-regulation in prokaryotes and eukaryotes | 2 | 1
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Santoni MJ; Pontarotti P; Birnbaum D; Borg JP
The LAP family: a phylogenetic point of view | 0 | 0
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Edwards AM; Kus B; Jansen R; Greenbaum D; Greenblatt J; Gerstein M
Bridging structural biology and genomics: assessing protein interaction data with known complexes | 5 | 5
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Kimura A; Adachi N; Horikoshi M
Series of vectors to evaluate the position and the order of two different affinity tags for purification of protein complexes | 0 | 0
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Fenyo D; Beavis RC
A method for assessing the statistical significance of mass spectrometry-based protein identifications using general scoring schemes | 0 | 0
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Griffin TJ; Lock CM; Li XJ; Patel A; Chervetsova L; Lee H; Wright ME; Ranish JA; Chen SS; Aebersold R
Abundance ratio-dependent proteomic analysis by mass spectrometry | 0 | 0
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| 141 | 1 | 141 2003 ANALYTICAL CHEMISTRY 75(6):1300-1306
Havlis J; Thomas H; Sebela M; Shevchenko A
Fast-response proteomics by accelerated in-gel digestion of proteins | 0 | 0
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Litchfield DW
Protein kinase CK2: structure, regulation and role in cellular decisions of life and death | 2 | 0
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Arac D; Murphy T; Rizo J
Facile detection of protein-protein interactions by one- dimensional NMR spectroscopy | 0 | 0
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Lehto M; Olkkonen VM
The OSBP-related proteins: a novel protein family involved in vesicle transport, cellular lipid metabolism, and cell signalling | 1 | 0
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Lin D; Tabb DL; Yates JR
Large-scale protein identification using mass spectrometry | 0 | 0
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Grunewald K; Medalia O; Gross A; Steven AC; Baumeister W
Prospects of electron cryotomography to visualize macromolecular complexes inside cellular compartments: implications of crowding | 0 | 0
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Bader GD; Hogue CW
An automated method for finding molecular complexes in large protein interaction networks | 0 | 0
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Figeys D
Novel approaches to map protein interactions | 0 | 0
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Martin AC; Drubin DG
Impact of genome-wide functional analyses on cell biology research | 0 | 0
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Drewes G; Bouwmeester T
Global approaches to protein-protein interactions | 0 | 0
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Gavin AC; Superti-Furga G
Protein complexes and proteome organization from yeast to man | 0 | 0
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Lan N; Montelione GT; Gerstein M
Ontologies for proteomics: towards a systematic definition of structure and function that scales to the genome level | 0 | 0
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Yu JW; Lemmon MA
Genome-wide analysis of signaling domain function | 0 | 0
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Hartzog GA
Transcription elongation by RNA polymerase II | 0 | 0
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Chanda SK; Caldwell JS
Fulfilling the promise: drug discovery in the post-genomic era | 0 | 0
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Passmore LA; McCormack EA; Au SWN; Paul A; Willison KR; Harper JW; Barford D
Doc1 mediates the activity of the anaphase-promoting complex by contributing to substrate recognition | 0 | 0
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Hand RA; Jia N; Bard M; Craven RJ
Saccharomyces cerevisiae Dap1p, a novel DNA damage response protein related to the mammalian membrane-associated progesterone receptor | 0 | 0
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Bauer A; Kuster B
Affinity purification-mass spectrometry - Powerful tools for the characterization of protein complexes | 1 | 0
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Fiehn O; Weckwerth W
Deciphering metabolic networks | 0 | 0
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Barz T; Ackermann K; Pyerin W
Perturbation of protein kinase CK2 uncouples executive part of phosphate maintenance pathway from cyclin-CDK control | 0 | 0
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Zheng PP; Kros JM; Sillevis-Smitt PAE; Luider TM
Proteomics in primary brain tumors | 0 | 0
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Liu YH; Vellekamp G; Chen GD; Mirza UA; Wylie D; Twarowska B; Tang JT; Porter FW; Wang SH; Nagabhushan TL; Pramanik BN
Proteomic study of recombinant adenovirus 5 encoding human p53 by matrix-assisted laser desorption/ionization mass spectrometry in combination with database search | 0 | 0
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Lai EM; Phadke ND; Kachman MT; Giorno R; Vazquez S; Vazquez JA; Maddock JR; Driks A
Proteomic analysis of the spore coats of Bacillus subtilis and Bacillus anthracis | 1 | 0
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Tan YSH; Morcos PA; Cannon JF
Pho85 phosphorylates the Glc7 protein phosphatase regulator Glc8 in vivo | 0 | 0
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Kufel J; Allmang C; Petfalski E; Beggs J; Tollervey D
Lsm proteins are required for normal processing and stability of ribosomal RNAs | 2 | 0
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Milkereit P; Strauss D; Bassler J; Gadal O; Kuhn H; Schutz S; Gas N; Lechner J; Hurt E; Tschochner H
A noc complex specifically involved in the formation and nuclear export of ribosomal 40 S subunits | 1 | 0
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Niebisch A; Bott M
Purification of a cytochrome bc(1)-aa(3) supercomplex with quinol oxidase activity from Corynebacterium glutamicum - Identification of a fourth subunit of cytochrome aa(3) oxidase and mutational analysis of diheme cytochrome c(1) | 0 | 0
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Ratts R; Zeng HY; Berg EA; Blue C; McComb ME; Costello CE; VanderSpek JC; Murphy JR
The cytosolic entry of diphtheria toxin catalytic domain requires a host-cell cytosolic translocation factor complex | 1 | 0
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Nooren IMA; Thornton JM
Structural characterisation and functional significance of transient protein-protein interactions | 0 | 0
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Sprinzak E; Sattath S; Margalit H
How reliable are experimental protein-protein interaction data? | 0 | 0
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Nedelkov D; Nelson RW
Delineating protein-protein interactions via biomolecular interaction analysis-mass spectrometry | 0 | 0
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Anderson DC; Li WQ; Payan DG; Noble WS
A new algorithm for the evaluation of shotgun peptide sequencing in proteomics: Support vector machine classification of peptide MS/MS spectra and SEQUEST scores | 0 | 0
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Ong SE; Kratchmarova I; Mann M
Properties of C-13-substituted arginine in stable isotope labeling by amino acids in cell culture (SILAC) | 0 | 0
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Trester-Zedlitz M; Kamada K; Burley SK; Fenyo D; Chait BT; Muir TW
A modular cross-linking approach for exploring protein interactions | 0 | 0
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Lindstrom DL; Squazzo SL; Muster N; Burckin TA; Wachter KC; Emigh CA; McCleery JA; Yates JR; Hartzog GA
Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins | 2 | 1
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Bashkirov VI; Bashkirova EV; Haghnazari E; Heyer WD
Direct kinase-to-kinase signaling mediated by the FHA phosphoprotein recognition domain of the Dun1 DNA damage checkpoint kinase | 0 | 0
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Kemp HA; Sprague GF
Far3 and five interacting proteins prevent premature recovery from pheromone arrest in the budding yeast Saccharomyces cerevisiae | 0 | 0
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Fatica A; Oeffinger M; Dlakic M; Tollervey D
Nob1p is required for cleavage of the 3 ' end of 18S rRNA | 0 | 0
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Vanrobays E; Gelugne JP; Gleizes PE; Caizergues-Ferrer M
Late cytoplasmic maturation of the small ribosomal subunit requires RIO proteins in Saccharomyces cerevisiae | 0 | 0
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Casamayor A; Snyder M
Molecular dissection of a yeast septin: Distinct domains are required for septin interaction, localization, and function | 0 | 0
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Abeliovich H; Zhang C; Dunn WA; Shokat KM; Klionsky DJ
Chemical genetic analysis of Apg1 reveals a nonkinase role in the induction of autophagy | 0 | 0
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Regelmann J; Schule T; Josupeit FS; Horak J; Rose M; Entian KD; Thumm M; Wolf DH
Catabolite degradation of fructose-1,6-bisphosphatase in the yeast Saccharomyces cerevisiae: A genome-wide screen identifies eight novel GID genes and indicates the existence of two degradation pathways | 0 | 0
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Hwang WW; Venkatasubrahmanyam S; Ianculescu AG; Tong A; Boone C; Madhani HD
A conserved RING finger protein required for histone H2B monoubiquitination and cell size control | 0 | 0
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Ladurner AG; Inouye C; Jain R; Tjian R
Bromodomains mediate an acetyl-histone encoded antisilencing function at heterochromatin boundaries | 0 | 0
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Leroy C; Lee SE; Vaze MB; Ochsenbien F; Guerois R; Haber JE; Marsolier-Kergoat MC
PP2C Phosphatases Ptc2 and Ptc3 are required for DNA checkpoint inactivation after a double-strand break | 0 | 0
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Asp E; Sunnerhagen P
Mkp1 and Mkp2, two MAPKAP-kinase homologues in Schizosaccharomyces pombe, interact with the MAP kinase Sty1 | 0 | 0
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Champion MM; Campbell CS; Siegele DA; Russell DH; Hu JC
Proteome analysis of Escherichia coli K-12 by two-dimensional native-state chromatography and MALDI-MS | 0 | 0
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Aebersold R; Mann M
Mass spectrometry-based proteomics | 0 | 0
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Phizicky E; Bastiaens PIH; Zhu H; Snyder M; Fields S
Protein analysis on a proteomic scale | 0 | 0
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Sali A; Glaeser R; Earnest T; Baumeister W
From words to literature in structural proteomics | 0 | 0
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Mitchell P
In the pursuit of industrial proteomics | 0 | 0
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Mann M; Jensen ON
Proteomic analysis of post-translational modifications | 0 | 0
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Taylor SW; Fahy E; Zhang B; Glenn GM; Warnock DE; Wiley S; Murphy AN; Gaucher SP; Capaldi RA; Gibson BW; Ghosh SS
Characterization of the human heart mitochondrial proteome | 2 | 0
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Blagoev B; Kratchmarova I; Ong SE; Nielsen M; Foster LJ; Mann M
A proteomics strategy to elucidate functional protein-protein interactions applied to EGF signaling | 1 | 1
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Ge H; Liu ZH; Church GM; Vidal M
Does mapping reveal correlation between gene expression and protein-protein interaction? Reply | 0 | 0
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Kanehisa M; Bork P
Bioinformatics in the post-sequence era | 0 | 0
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Patterson SD; Aebersold RH
Proteomics: the first decade and beyond | 1 | 0
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Ranish JA; Yi EC; Leslie DM; Purvine SO; Goodlett DR; Eng J; Aebersold R
The study of macromolecular complexes by quantitative proteomics | 0 | 0
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Huber LA
Is proteomics heading in the wrong direction? | 0 | 0
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Vaglio P; Lamesch P; Reboul J; Rual JF; Martinez M; Hill D; Vidal M
WorfDB: the Caenorhabditis elegans ORFeome database | 0 | 0
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