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Fri Dec 10 16:03:56 2004
DNA determination mediates innate immunity to retroviral infection
Harris RS, Bishop KN, Sheehy AM, Craig HM, Petersen-Mahrt SK, Watt IN, Neuberger MS, Malim MH
CELL 113 (6): 803-809 JUN 13 2003
and the citing papers

Nodes: 87, Authors: 292, Journals: 42, Outer References: 2132, Words: 349
Collection span: 2003 - 2004
View: Overview. Sorted by year, source, volume, issue, page.
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
10231 2003 CELL 113(6):803-809
Harris RS; Bishop KN; Sheehy AM; Craig HM; Petersen-Mahrt SK; et al.
DNA determination mediates innate immunity to retroviral infection
8686
21202 2003 CELL 114(3):281-283
Goff SP
Death by deamination: A novel host restriction system for HIV-1
69
33213 2003 CURRENT BIOLOGY 13(22):2009-2013
Conticello SG; Harris RS; Neuberger MS
The Vif protein of HIV triggers degradation of the human antiretroviral DNA deaminase APOBEC3G
2326
41264 2003 JOURNAL OF BIOLOGICAL CHEMISTRY 278(45):44412-44416
Shindo K; Takaori-Kondo A; Kobayashi M; Abudu A; Fukunaga K; et al.
The enzymatic activity of CEM15/Apobec-3G is essential for the regulation of the infectivity of HIV-1 virion but not a sole determinant of its antiviral activity
79
51475 2003 JOURNAL OF VIROLOGY 77(21):11398-11407
Kao S; Khan MA; Miyagi E; Plishka R; Buckler-White A; et al.
The human immunodeficiency virus type 1 Vif protein reduces intracellular expression and inhibits packaging of APOBEC3G (CEM15), a cellular inhibitor of virus infectivity
1924
61456 2003 MOLECULAR CELL 12(2):501-508
Barreto V; Reina-San-Martin B; Ramiro AR; McBride KM; Nussenzweig MC
C-terminal deletion of AID uncouples class switch recombination from somatic hypermutation and gene conversion
220
71307 2003 MOLECULAR CELL 12(3):591-601
Stopak K; de Noronha C; Yonemoto W; Greene WC
HIV-1 Vif blocks the antiviral activity of APOBEC3G by impairing both its translation and intracellular stability
3950
81158 2003 MOLECULAR THERAPY 8(4):525-527
Cullen BR
HIV-1 Vif: Counteracting innate antiretroviral defenses
12
91189 2003 NATURE 424(6944):21-22
Gu YP; Sundquist WI
Good to CU
66
1012910 2003 NATURE IMMUNOLOGY 4(7):641-643
Harris RS; Sheehy AM; Craig HM; Malim MH; Neuberger MS
DNA deamination: not just a trigger for antibody diversification but also a mechanism for defense against retroviruses
79
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
1114011 2003 NATURE MEDICINE 9(11):1398-1403
Marin M; Rose KM; Kozak SL; Kabat D
HIV-1 Vif protein binds the editing enzyme APOBEC3G and induces its degradation
4155
1212512 2003 NATURE MEDICINE 9(11):1404-1407
Sheehy AM; Gaddis NC; Malim MH
The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif
4052
131413 2003 NATURE REVIEWS IMMUNOLOGY 3(7):517-517
O'Connell D
HIV - One step forward ... one step back
00
14111814 2003 NATURE REVIEWS MICROBIOLOGY 1(3):181-190
Simon V; Ho DD
HIV-1 dynamics in vivo: Implications for therapy
00
1512915 2003 SCIENCE 301(5635):923-925
KewalRamani VN; Coffin JM
Weapons of mutational destruction
17
1612716 2003 SCIENCE 302(5647):1056-1060
Yu XH; Yu YK; Liu BD; Luo K; Kong W; et al.
Induction of APOBEC3G ubiquitination and degradation by an HIV-1 Vif-Cul5-SCF complex
3747
1714017 2003 SEMINARS IN IMMUNOLOGY 15(4):201-208
Hayday AC; Pennington DJ; Giuggio VM
Genomics and immunology
00
1822018 2003 TRENDS IN MOLECULAR MEDICINE 9(10):409-413
Vartanian JP; Sommer P; Wain-Hobson S
Death and the retrovirus
89
19110619 2003 VIRAL IMMUNOLOGY 16(4):461-474
Navas-Martin S; Weiss SR
SARS: Lessons learned from other coronaviruses
01
2031620 2004 AIDS 18(13):1861-1863
Berkhout B; de Ronde A
APOBEC3G versus reverse transcriptase in the generation of HIV-1 drug-resistance mutations
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
2131421 2004 AIDS 18(13):1863-1865
Min W; Hui X; Hong KX; Huang HL; Tang HL; et al.
Biased G-to-A hypermutation in HIV-1 proviral DNA from a long-term non-progressor
00
2226622 2004 AIDS RESEARCH AND HUMAN RETROVIRUSES 20(3):285-295
Swiggard WJ; O'Doherty U; McGain D; Jeyakumar D; Malim MH
Long HIV type 1 reverse transcripts can accumulate stably within resting CD4(+) T cells while short ones are degraded
11
2362123 2004 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 321(3):566-573
Douaisi M; Dussart S; Courcoul M; Bessou G; Vigne R; et al.
HIV-1 and MLV Gag proteins are sufficient to recruit APOBEC3G into virus-like particles
00
241124 2004 CELL 116(4)
Harris RS; Bishop KN; Sheehy AM; Craig HM; Petersen-Mahrt SK; et al.
DNA deamination mediates innate immunity to retroviral infection (vol 113, pg 803, 2003)
00
25163425 2004 CURRENT BIOLOGY 14(15):1385-1391
Liddament MT; Brown WL; Schumacher AJ; Harris RS
APOBEC3F properties and hypermutation preferences indicate activity against HIV-1 in vivo
34
26123026 2004 CURRENT BIOLOGY 14(15):1392-1396
Bishop KN; Holmes RK; Sheehy AM; Davidson NO; Cho SJ; et al.
Cytidine deamination of retroviral DNA by diverse APOBEC proteins
45
2713627 2004 CURRENT OPINION IN GENETICS & DEVELOPMENT 14(1):5-10
Friedberg EC; McDaniel LD; Schultz RA
The role of endogenous and exogenous DNA damage and mutagenesis
03
2874528 2004 CURRENT OPINION IN IMMUNOLOGY 16(4):477-482
Navarro F; Landau NR
Recent insights into HIV-1 Vif
12
2953729 2004 CURRENT OPINION IN MICROBIOLOGY 7(4):407-411
Trkola A
HIV-host interactions: vital to the virus and key to its inhibition
00
3063830 2004 CURRENT OPINION IN MICROBIOLOGY 7(5):555-559
Trkola A
HIV-host interactions: vital to the virus and key to its inhibition (vol 7, pg 555, 2004)
11
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
31123731 2004 CURRENT PHARMACEUTICAL DESIGN 10(30):3725-3739
Muriaux D; Darlix JL; Cimarelli A
Targeting the assembly of the human immunodeficiency virus type I
01
3242932 2004 DNA REPAIR 3(1):85-89
Bhagwat AS
DNA-cytosine deaminases: from antibody maturation to antiviral defense
11
3313333 2004 DNA REPAIR 3(5):505-513
Fischer JA; Muller-Weeks S; Caradonna S
Proteolytic degradation of the nuclear isoform of uracil-DNA glycosylase occurs during the S phase of the cell cycle
00
3423334 2004 DNA REPAIR 3(7):687-692
Steele EJ
DNA polymerase-eta as a reverse transcriplase: implications for mechanisms of hypermutation in innate anti-retroviral defences and antibody SHM systems
00
35113235 2004 EMBO JOURNAL 23(12):2451-2458
Wiegand HL; Doehle BP; Bogerd HP; Cullen BR
A second human antiretroviral factor, APOBEC3F, is suppressed by the HIV-1 and HIV-2 Vif proteins
67
36112336 2004 EMBO REPORTS 5(7):679-680
Trono D
Retroviruses under editing crossfire - A second member of the human APOBEC3 family is a Vif-blockable innate antiretroviral factor
00
3712637 2004 EUROPEAN JOURNAL OF IMMUNOLOGY 34(3):844-849
Fugmann SD; Rush JS; Schatz DG
Non-redundancy of cytidine deaminases in class switch recombination
02
38115038 2004 HUMAN MOLECULAR GENETICS 13(16):1785-1791
Zhang JZ; Webb DM
Rapid evolution of primate antiviral enzyme APOBEC3G
12
39112439 2004 INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY 36(9):1716-1734
Rezende LF; Prasad VR
Nucleo side-analog resistance mutations in HIV-1 reverse transcriptase and their influence on polymerase fidelity and viral mutation rates
00
4063940 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(9):7792-7798
Mehle A; Strack B; Ancuta P; Zhang CS; McPike M; et al.
Vif overcomes the innate antiviral activity of APOBEC3G by promoting its degradation in the ubiquitin-proteasome pathway
1313
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
4184641 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(13):12355-12362
Akari H; Fujita M; Kao S; Khan MA; Shehu-Xhilaga M; et al.
High level expression of human immunodeficiency virus type-1 Vif inhibits viral infectivity by modulating proteolytic processing of the gag precursor at the p2/nucleocapsid processing site
22
4261742 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(15):14481-14483
Mangeat B; Turelli P; Liao SY; Trono D
A single amino acid determinant governs the species-specific sensitivity of APOBEC3G to vif action
1010
4395343 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(32):33177-33184
Cen S; Guo F; Niu MJ; Saadatmand J; Deflassieux J; et al.
The interaction between HIV-1 Gag and APOBEC3G
44
44163344 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(33):34083-34086
Alce TM; Popik W
APOBEC3G is incorporated into virus-like particles by a direct interaction with HIV-1 Gag nucleocapsid protein
22
45103345 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(34):35822-35828
Svarovskaia ES; Xu HZ; Mbisa JL; Barr R; Gorelick RJ; et al.
Human apolipoprotein B mRNA-editing enzyme-catalytic polypeptide-like 3G (APOBEC3G) is incorporated into HIV-1 Virions through interactions with viral and nonviral RNAs
33
4662446 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(42):43371-43373
Turelli P; Vianin S; Trono D
The innate antiretroviral factor APOBEC3G does not affect human LINE-1 retrotransposition in a cell culture assay
00
4742947 2004 JOURNAL OF CELLULAR BIOCHEMISTRY 92(3):560-572
Li JL; Potash MJ; Volsky DJ
Functional domains of APOBEC3G required for antiviral activity
11
4839648 2004 JOURNAL OF IMMUNOLOGY 172(10):5815-5821
Wang CL; Wabl M
DNA acrobats of the Ig class switch
02
4968049 2004 JOURNAL OF IMMUNOLOGY 172(11):6513-6518
Cascalho M
Advantages and disadvantages of cytidine deamination
00
5013950 2004 JOURNAL OF INFECTIOUS DISEASES 189(4):567-571
Pomerantz RJ
HIV-1 infection and genomics: Sorting out the complexity
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
5117951 2004 JOURNAL OF MEDICAL VIROLOGY 73(3):350-361
Pariente N; Pernas M; de la Rosa R; Gomez-Mariano G; Fernandez G; et al.
Long-term suppression of plasma viremia with highly active antiretroviral therapy despite virus evolution and very limited selection of drug-resistant genotypes
01
5215752 2004 JOURNAL OF MOLECULAR BIOLOGY 337(3):585-596
Beale RCL; Petersen-Mahrt SK; Watt IN; Harris RS; Rada C; et al.
Comparison of the differential context-dependence of DNA deamination by APOBEC enzymes: Correlation with mutation spectra in vivo
812
53417153 2004 JOURNAL OF MOLECULAR MEDICINE-JMM 82(5):280-297
Krokan HE; Kavli B; Slupphaug G
Novel aspects of macromolecular repair and relationship to human disease
02
5456654 2004 JOURNAL OF VIROLOGY 78(4):2072-2081
Liu BD; Yu XH; Luo K; Yu YK; Yu XF
Influence of primate lentiviral vif and proteasome inhibitors on human immunodeficiency virus type 1 virion packaging of APOBEC3G
89
5514755 2004 JOURNAL OF VIROLOGY 78(5):2426-2433
Gao F; Chen Y; Levy DN; Conway JA; Kepler TB; et al.
Unselected mutations in the human immunodeficiency virus type 1 genome are mostly nonsynonymous and often deleterious
23
5615756 2004 JOURNAL OF VIROLOGY 78(8):4234-4247
Charpentier C; Dwyer DE; Mammano F; Lecossier D; Clavel F; et al.
Role of minority populations of human immunodeficiency virus type 1 in the evolution of viral resistance to protease inhibitors
00
5793757 2004 JOURNAL OF VIROLOGY 78(11):6073-6076
Zheng YH; Irwin D; Kurosu T; Tokunaga K; Sata T; et al.
Human APOBEC3F is another host factor that blocks human immunodeficiency virus type 1 replication
810
5815458 2004 JOURNAL OF VIROLOGY 78(14):7565-7574
Pastore C; Ramos A; Mosier DE
Intrinsic obstacles to human immunodeficiency virus type 1 coreceptor switching
00
59103359 2004 JOURNAL OF VIROLOGY 78(15):8238-8244
Kobayashi M; Takaori-Kondo A; Shindo K; Abudu A; Fukunaga K; et al.
APOBEC3G targets specific virus species
11
6025360 2004 JOURNAL OF VIROLOGY 78(16):8799-8811
Garcin D; Marq JB; Iseni F; Martin S; Kolakofsky D
A short peptide at the amino terminus of the Sendai virus C protein acts as an independent element that induces STAT1 instability
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
6117961 2004 JOURNAL OF VIROLOGY 78(17):9524-9537
Llano M; Vanegas M; Fregoso O; Saenz D; Chung S; et al.
LEDGF/p75 determines cellular trafficking of diverse lentiviral but not murine oncoretroviral integrase proteins and is a component of functional lentiviral preintegration complexes
00
6244562 2004 JOURNAL OF VIROLOGY 78(19):10574-10581
Feng F; Davis A; Lake JA; Carr J; Xia W; et al.
Ring finger protein ZIN interacts with human immunodeficiency virus type 1 Vif
00
6324263 2004 JOURNAL OF VIROLOGY 78(19):10747-10754
Ciuffi A; Bleiber G; Munoz M; Martinez R; Loeuillet C; et al.
Entry and transcription as key determinants of differences in CD4 T-cell permissiveness to human immunodeficiency virus type 1 infection
00
6443364 2004 JOURNAL OF VIROLOGY 78(20):11070-11076
An P; Bleiber G; Duggal P; Nelson G; May M; et al.
APOBEC3G genetic variants and their influence on the progression to AIDS
00
6544565 2004 JOURNAL OF VIROLOGY 78(21):11816-11822
Ikeda Y; Ylinen LMJ; Kahar-Bador M; Towers GJ
Influence of gag on human immunodeficiency virus type 1 species-specific tropism
00
66129666 2004 JOURNAL OF VIROLOGY 78(21):11841-11852
Luo K; Liu BD; Xiao ZX; Yu YK; Yu XH; et al.
Amino-terminal region of the human immunodeficiency virus type 1 nucleocapsid is required for human APOBEC3G packaging
00
67154967 2004 JOURNAL OF VIROLOGY 78(21):12041-12046
Gaddis NC; Sheehy AM; Ahmad KM; Swanson CM; Bishop KN; et al.
Further investigation of simian immunodeficiency virus vif function in human cells
00
6892468 2004 JOURNAL OF VIROLOGY 78(21):12058-12061
Zennou W; Perez-Caballero D; Gottlinger H; Bieniasz PD
APOBEC3G incorporation into human immunodeficiency virus type 1 particles
00
6918169 2004 JOURNAL OF VIROLOGY 78(22):12537-12547
Baumann JG; Unutmaz D; Miller MD; Breun SKJ; Grill SM; et al.
Murine T cells potently restrict human immunodeficiency virus infection
00
7051070 2004 M S-MEDECINE SCIENCES 20(2):139-141
Schwartz O
HIV-1, a very Vif virus
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
7183471 2004 MICROBES AND INFECTION 6(9):791-798
Fujita M; Akari H; Sakurai A; Yoshida A; Chiba T; et al.
Expression of HIV-1 accessory protein Vif is controlled uniquely to be low and optimal by proteasome degradation
00
722010172 2004 NATURE IMMUNOLOGY 5(11):1109-1115
Bieniasz PD
Intrinsic immunity: a front-line defense against viral attack
00
732610673 2004 NATURE REVIEWS IMMUNOLOGY 4(11):868-877
Harris RS; Liddament MT
Retroviral restriction by APOBEC proteins
00
7453674 2004 NATURE STRUCTURAL & MOLECULAR BIOLOGY 11(5):435-442
Yu Q; Konig R; Pillai S; Chiles K; Kearney M; et al.
Single-strand specificity of APOBEC3G accounts for minus-strand deamination of the HIV genome
911
75135975 2004 NUCLEIC ACIDS RESEARCH 32(8):2421-2429
Suspene R; Sommer P; Henry M; Ferris S; Guetard D; et al.
APOBEC3G is a single-stranded DNA cytidine deaminase and functions independently of HIV reverse transcriptase
00
76115076 2004 PLOS BIOLOGY 2(9):1278-1285
Sawyer SL; Emerman M; Malik HS
Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G
00
7762477 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(11):3725-3726
Kaiser SM; Emerman M
Controlling lentiviruses: Single amino acid changes can determine specificity
00
7882878 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(11):3770-3774
Bogerd HP; Doehle BP; Wiegand HL; Cullen BR
A single amino acid difference in the host APOBEC3G protein controls the primate species specificity of HIV type 1 virion infectivity factor
1516
7963079 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(11):3927-3932
Schrofelbauer R; Chen D; Landau NR
A single amino acid of APOBEC3G controls its species-specific interaction with virion infectivity factor (Vif)
00
8083280 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(15):5652-5657
Xu HZ; Svarovskaia ES; Barr R; Zhang YJ; Khan MA; et al.
A single amino acid substitution in human APOBEC3G antiretroviral enzyme confers resistance to HIV-1 virion infectivity factor-induced depletion
88
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
8113781 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(29):10774-10779
Hatziioannou T; Perez-Caballero D; Yang A; Cowan S; Bieniasz PD
Retrovirus resistance factors Ref1 and Lv1 are species-specific variants of TRIM5 alpha
14
8244282 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(29):10780-10785
Keckesova Z; Ylinen LMJ; Towers GJ
The human and African green monkey TRIM5 alpha genes encode Ref1 and Lv1 retroviral restriction factor activities
25
8342483 2004 TRENDS IN MICROBIOLOGY 12(4):145-148
Argyris EG; Pomerantz RJ
HIV-1 Vif versus APOBEC3G: newly appreciated warriors in the ancient battle between virus and host
00
8427084 2004 TRENDS IN MICROBIOLOGY 12(4):170-177
Freed EO
HIV-1 and the host cell: an intimate association
00
85137085 2004 TRENDS IN MOLECULAR MEDICINE 10(6):291-297
Rose KM; Marin M; Kozak SL; Kabat D
The viral infectivity factor (Vif) of HIV-1 unveiled
11
8615786 2004 VIROLOGY 318(1):350-359
Kristbjornsdottir HB; Andresdottir V; Svansson V; Torsteinsdottir S; Matthiasdottir S; et al.
The vif gene of maedi-visna virus is essential for infectivity in vivo and in vitro
00
87102087 2004 VIROLOGY 328(2):163-168
Schafer A; Bogerd HP; Cullen BR
Specific packaging of APOBEC3G into HIV-1 virions is mediated by the nucleocapsid domain of the gag polyprotein precursor
00

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