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Tue May 11 15:37:06 2004
Functional profiling of the Saccharomyces cerevisiae genome
Giaever G, Chu AM, Ni L, Connelly C, Riles L, Veronneau S, Dow S, Lucau-Danila A, Anderson K, Andre B, Arkin AP, Astromoff A, El Bakkoury M, Bangham R, Benito R, Brachat S, Campanaro S, Curtiss M, Davis K, Deutschbauer A, Entian KD, Flaherty P, Foury F, Garfinkel DJ, Gerstein M, Gotte D, Guldener U, Hegemann JH, Hempel S, Herman Z, Jaramillo DF, Kelly DE, Kelly SL, Kotter P, LaBonte D, Lamb DC, Lan N, Liang H, Liao H, Liu L, Luo CY, Lussier M, Mao R, Menard P, Ooi SL, Revuelta JL, Roberts CJ, Rose M, Ross-Macdonald P, Scherens B, Schimmack G, Shafer B, Shoemaker DD, Sookhai-Mahadeo S, Storms RK, Strathern JN, Valle G, Voet M, Volckaert G, Wang CY, Ward TR, Wilhelmy J, Winzeler EA, Yang YH, Yen G, Youngman E, Yu KX, Bussey H, Boeke JD, Snyder M, Philippsen P, Davis RW, Johnston M
NATURE
418 (6896): 387-391 JUL 25 2002
and the citing papers

Nodes: 176, Authors: 978, Sources: 83, Outer References: 7231
Collection span: 2002 - 2004
View: Overview. Sorted by LCS.
#LCRNCRNodes / Authors / DateLCSGCS
102211 2002 NATURE 418(6896):387-391
Giaever G; Chu AM; Ni L; Connelly C; Riles L; Veronneau S; Dow S; Lucau-Danila A; Anderson K; Andre B; Arkin AP; Astromoff A; El Bakkoury M; Bangham R; Benito R; Brachat S; Campanaro S; Curtiss M; Davis K; Deutschbauer A; Entian KD; Flaherty P; Foury F; Garfinkel DJ; Gerstein M; Gotte D; Guldener U; Hegemann JH; Hempel S; Herman Z; Jaramillo DF; Kelly DE; Kelly SL; Kotter P; LaBonte D; Lamb DC; Lan N; Liang H; Liao H; Liu L; Luo CY; Lussier M; Mao R; Menard P; Ooi SL; Revuelta JL; Roberts CJ; Rose M; Ross-Macdonald P; Scherens B; Schimmack G; Shafer B; Shoemaker DD; Sookhai-Mahadeo S; Storms RK; Strathern JN; Valle G; Voet M; Volckaert G; Wang CY; Ward TR; Wilhelmy J; Winzeler EA; Yang YH; Yen G; Youngman E; Yu KX; Bussey H; Boeke JD; Snyder M; Philippsen P; Davis RW; Johnston M
Functional profiling of the Saccharomyces cerevisiae genome
175175
214883 2003 NATURE 425(6959):686-691
Huh WK; Falvo JV; Gerke LC; Carroll AS; Howson RW; Weissman JS; O'Shea EK
Global analysis of protein localization in budding yeast
730
315113 2002 NATURE REVIEWS GENETICS 3(9):653-661
Grunenfelder B; Winzeler EA
Treasures and traps in genome-wide data sets: Case examples from yeast
614
416925 2003 CELL 113(7):919-933
Peng WT; Robinson MD; Mnaimneh S; Krogan NJ; Cagney G; Morris Q; Davierwala AP; Grigull J; Yang XQ; Zhang W; Mitsakakis N; Ryan OW; Datta N; Jojic V; Pal C; Canadien V; Richards D; Beattie B; Wu LF; Altschuler SJ; Roweis S; Frey BJ; Emili A; Greenblatt JF; Hughes TR
Panoramic view of yeast noncoding RNA processing
67
512816 2002 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 99(24):15530-15535
Deutschbauer AM; Williams RM; Chu AM; Davis RW
Parallel phenotypic analysis of sporulation and postgermination growth in Saccharomyces cerevisiae
58
612378 2003 NATURE 421(6918):63-66
Gu ZL; Steinmetz LM; Gu X; Scharfe C; Davis RW; Li WH
Role of duplicate genes in genetic robustness against null mutations
532
7140120 2003 YEAST 20(1):53-67
Warringer J; Blomberg A
Automated screening in environmental arrays allows analysis of quantitative phenotypic profiles in Saccharomyces cerevisiae
49
813449 2003 GENETICS 163(1):47-54
Enyenihi AH; Saunders WS
Large-scale functional genomic analysis of sporulation and meiosis in Saccharomyces cerevisiae
36
912980 2003 NATURE 423(6941):720-724
Kanemaki M; Sanchez-Diaz A; Gambus A; Labib K
Functional proteomic identification of DNA replication proteins by induced proteolysis in vivo
37
1013687 2003 NATURE GENETICS 35(3):277-286
Ooi SL; Shoemaker DD; Boeke JD
DNA helicase gene interaction network defined using synthetic lethality analyzed by microarray
38
#LCRNCRNodes / Authors / DateLCSGCS
11125109 2003 SCIENCE 301(5633):653-657
Alonso JM; Stepanova AN; Leisse TJ; Kim CJ; Chen HM; Shinn P; Stevenson DK; Zimmerman J; Barajas P; Cheuk R; Gadrinab C; Heller C; Jeske A; Koesema E; Meyers CC; Parker H; Prednis L; Ansari Y; Choy N; Deen H; Geralt M; Hazari N; Hom E; Karnes M; Mulholland C; Ndubaku R; Schmidt I; Guzman P; Aguilar-Henonin L; Schmid M; Weigel D; Carter DE; Marchand T; Risseeuw E; Brogden D; Zeko A; Crosby WL; Berry CC; Ecker JR
Genome-wide Insertional mutagenesis of Arabidopsis thaliana
342
121376 2002 CURRENT OPINION IN MICROBIOLOGY 5(5):466-471
Jiang B; Bussey H; Roemer T
Novel strategies in antifungal lead discovery
23
1315519 2002 TRENDS IN MICROBIOLOGY 10(10):456-462
Firon A; d'Enfert C
Identifying essential genes in fungal pathogens of humans
25
1417365 2003 JOURNAL OF CELL BIOLOGY 161(2):321-332
Vizeacoumar FJ; Torres-Guzman JC; Tam YYC; Aitchison JD; Rachubinski RA
YHR150w and YDR479c encode peroxisomal integral membrane proteins involved in the regulation of peroxisome number, size, and distribution in Saccharomyces cerevisiae
22
1513081 2003 NATURE 424(6945):194-197
Papp B; Pal C; Hurst LD
Dosage sensitivity and the evolution of gene families in yeast
29
161351 2002 BIOTECHNIQUES 33(6):1308-1316
Michaud GA; Snyder M
Proteomic approaches for the global analysis of proteins
13
1719434 2003 CURRENT OPINION IN PLANT BIOLOGY 6(5):430-440
Zhang JZ
Overexpression analysis of plant transcription factors
14
181845 2003 FEMS MICROBIOLOGY LETTERS 223(2):253-258
Zettel MF; Garza LR; Cass AM; Myhre RA; Haizlip LA; Osadebe SN; Sudimack DW; Pathak R; Stone TL; Polymenis M
The budding index of Saccharomyces cerevisiae deletion strains identifies genes important for cell cycle progression
11
1914351 2003 GENETICS 164(3):867-879
Griffith JL; Coleman LE; Raymond AS; Goodson SG; Pittard WS; Tsui C; Devine SE
Functional genomics reveals relationships between the retrovirus-like Ty1 element and its host Saccharomyces cerevisiae
11
2016252 2003 GENETICS 164(3):895-907
Vincent K; Wang Q; Jay S; Hobbs K; Rymond BC
Genetic interactions with CLF1 identify additional pre-mRNA splicing factors and a link between activators of yeast vesicular transport and splicing
11
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2113959 2003 JOURNAL OF BACTERIOLOGY 185(19):5673-5684
Gerdes SY; Scholle MD; Campbell JW; Balazsi G; Ravasz E; Daugherty MD; Somera AL; Kyrpides NC; Anderson I; Gelfand MS; Bhattacharya A; Kapatral V; D'Souza M; Baev MV; Grechkin Y; Mseeh F; Fonstein MY; Overbeek R; Barabasi AL; Oltvai ZN; Osterman AL
Experimental determination and system level analysis of essential genes in Escherichia coli MG1655
14
2214460 2003 JOURNAL OF BIOLOGICAL CHEMISTRY 278(19):17228-17235
Lotz GP; Lin HY; Harst A; Obermann WMJ
Aha1 binds to the middle domain of Hsp90, contributes to client protein activation, and stimulates the ATPase activity of the molecular chaperone
15
2314161 2003 JOURNAL OF BIOLOGICAL CHEMISTRY 278(31):28470-28478
Hyle JW; Shaw RJ; Reines D
Functional distinctions between IMP dehydrogenase genes in providing mycophenolate resistance and guanine prototrophy to yeast
11
2411769 2003 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 125(35):10543-10545
Haggarty SJ; Clemons PA; Schreiber SL
Chemical genomic profiling of biological networks using graph theory and combinations of small molecule perturbations
11
2513970 2003 MOLECULAR AND CELLULAR BIOLOGY 23(11):3909-3917
Nath N; McCartney RR; Schmidt MC
Yeast Pak1 kinase associates with and activates Snf1
17
2614871 2003 MOLECULAR AND CELLULAR BIOLOGY 23(12):4344-4355
Kallstrom G; Hedges J; Johnson A
The putative GTPases Nog1p and Lsg1p are required for 60S ribosomal subunit biogenesis and are localized to the nucleus and cytoplasm, respectively
13
2725474 2003 MOLECULAR BIOLOGY OF THE CELL 14(10):4089-4102
Tam YYC; Torres-Guzman JC; Vizeacoumar FJ; Smith JJ; Marelli M; Aitchison JD; Rachubinski RA
Pex11-related proteins in peroxisome dynamics: A role for the novel peroxin Pex27p in controlling peroxisome size and number in Saccharomyces cerevisiae
11
2845676 2003 MOLECULAR CELL 12(6):1353-1365
Hazbun TR; Malmstrom L; Anderson S; Graczyk BJ; Fox B; Riffle M; Sundin BA; Aranda JD; McDonald WH; Chiu CH; Snydsman BE; Bradley P; Muller EGD; Fields S; Baker D; Yates JR; Davis TN
Assigning function to yeast proteins by integration of technologies
12
2924589 2003 NATURE REVIEWS GENETICS 4(4):309-314
Bochner BR
New technologies to assess genotype-phenotype relationships
17
30111391 2003 NEUROMOLECULAR MEDICINE 4(1-2):133-146
Sherman MY; Muchowski PJ
Making yeast tremble - Yeast models as tools to study neurodegenerative disorders
11
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3114694 2003 PHYTOCHEMISTRY 62(6):929-937
Castrillo JI; Hayes A; Mohammed S; Gaskell SJ; Oliver SG
An optimized protocol for metabolome analysis in yeast using direct infusion electrospray mass spectrometry
13
32154100 2003 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100(20):11529-11534
Huang ME; Rio AG; Nicolas A; Kolodner RD
A genomewide screen in Saccharomyces cerevisiae for genes that suppress the accumulation of mutations
12
33136105 2003 RADIATION RESEARCH 160(1):14-24
Game JC; Birrell GW; Brown JA; Shibata T; Baccari C; Chu AM; Williamson MS; Brown JM
Use of a genome-wide approach to identify new genes that control resistance of Saccharomyces cerevisiae to ionizing radiation
11
34258106 2003 REPRODUCTION 125(4):447-456
Schlecht U; Primig M
Mining meiosis and gametogenesis with DNA microarrays
16
35129108 2003 SCIENCE 300(5617):258-260
Snyder M; Gerstein M
Genomics - Defining genes in the genomics era
110
36130110 2003 SCIENCE 302(5651):1769-1772
Willingham S; Outeiro TF; DeVit MJ; Lindquist SL; Muchowski PJ
Yeast genes that enhance the toxicity of a mutant huntingtin fragment or alpha-synuclein
14
373138114 2003 TRENDS IN CELL BIOLOGY 13(7):344-356
Bader GD; Heilbut A; Andrews B; Tyers M; Hughes T; Boone C
Functional genomics and proteomics: charting a multidimensional map of the yeast cell
13
38267152 2004 MOLECULAR CELL 13(2):225-239
Krogan NJ; Peng WT; Cagney G; Robinson MD; Haw R; Zhong GQ; Guo XH; Zhang X; Canadien V; Richards DP; Beattie BK; Lalev A; Zhang W; Davierwala AP; Mnaimneh S; Starostine A; Tikuisis AP; Grigull J; Datta N; Bray JE; Hughes TR; Emili A; Greenblatt JF
High-definition macromolecular composition of yeast RNA-processing complexes
11
391282 2002 BMC BIOINFORMATICS 3():-
Robinson MD; Grigull J; Mohammad N; Hughes TR
FunSpec: a web-based cluster interpreter for yeast
010
401443 2002 CANCER CELL 2(4):267-273
Bjornsti MA
Cancer therapeutics in yeast
02
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411254 2002 COMPARATIVE AND FUNCTIONAL GENOMICS 3(5):398-404
[Anon]
Upstream - news in genomics
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421865 2002 CURRENT GENETICS 42(2):73-84
Sunnerhagen P
Prospects for functional genomics in Schizosaccharomyces pombe
01
4311267 2002 JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES 782(1-2):3-25
Oefner PJ
Sequence variation and the biological function of genes: methodological and biological considerations
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441738 2002 JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES 782(1-2):151-163
Steinmetz LM; Deutschbauer AM
Gene function on a genomic scale
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Jarvis ED; Smith VA; Wada K; Rivas MV; McElroy M; Smulders TV; Carninci P; Hayashizaki Y; Dietrich F; Wu X; McConnell P; Yu J; Wang PP; Hartemink AJ; Lin S
A framework for integrating the songbird brain
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4617810 2002 JOURNAL OF MASS SPECTROMETRY 37(12):1185-1198
Pasa-Tolic L; Lipton MS; Masselon CD; Anderson GA; Shen YF; Tolic N; Smith RD
Gene expression profiling using advanced mass spectrometric approaches
08
471312 2002 NATURE REVIEWS GENETICS 3(9):645-645
Skipper M
Functional genomics - Fully functional
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4813914 2002 NUCLEIC ACIDS RESEARCH 30(24):-
Kiechle M; Manivasakam P; Eckardt-Schupp F; Schiestl RH; Friedl AA
Promoter-trapping in Saccharomyces cerevisiae by radiation-assisted fragment insertion
00
4912815 2002 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 99(22):13963-13965
Nitiss JL
A copper connection to the uptake of platinum anticancer drugs
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5014917 2002 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 99(25):16144-16149
Dunham MJ; Badrane H; Ferea T; Adams J; Brown PO; Rosenzweig F; Botstein D
Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae
012
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5113618 2002 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 99(26):16707-16712
Rosas-Sandoval G; Ambrogelly A; Rinehart J; Wei D; Cruz-Vera LR; Graham DE; Stetter KO; Guarneros G; Soll D
Orthologs of a novel archaeal and of the bacterial peptidyl-tRNA hydrolase are nonessential in yeast
02
5215220 2003 ANNALS OF APPLIED BIOLOGY 142(1):33-39
Wilson ID; Barker GL; Edwards KJ
Genotype to phenotype: a technological challenge
03
5312821 2003 BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS 1633(1):68-74
Mo C; Milla P; Athenstaedt K; Ott R; Balliano G; Daum G; Bard M
In yeast sterol biosynthesis the 3-keto reductase protein (Erg27p) is required for oxidosqualene cyclase (Erg7p) activity
01
5415222 2003 BIOLOGY OF THE CELL 95(9):595-602
Wisniewski TP; Tanzi CL; Gindhart JG
The Drosophila kinesin-1 associated protein YETI binds both kinesin subunits
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5516023 2003 BIOTECHNIQUES ():64-+
O'Neill GM; Catchpoole DR; Golemis EA
From correlation to causality: Microarrays, cancer, and cancer treatment
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5614224 2003 CANCER RESEARCH 63(15):4614-4619
Schwarze SR; Fu VX; Jarrard DF
Cdc37 enhances proliferation and is necessary for normal human prostate epithelial cell survival
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5715726 2003 CELL 115(7):813-823
Makhnevych T; Lusk CP; Anderson AM; Aitchison JD; Wozniak RW
Cell cycle regulated transport controlled by alterations in the nuclear pore complex
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5816027 2003 CELLULAR AND MOLECULAR BIOLOGY 49(7):1025-1035
Martinez M; Pramanik A; Moto-Ndje S; Moore CW
Overexpression of genes involved in vesicular trafficking to the vacuole defends against lethal effects of oxidative damage
00
5911328 2003 CURRENT BIOLOGY 13(14):R571-R573
Stephens CM; Laub MT
Microbial genomics: All that you can't leave behind
00
6013829 2003 CURRENT GENETICS 44(3):115-123
Wendland J
PCR-based methods facilitate targeted gene manipulations and cloning procedures
01
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6114430 2003 CURRENT OPINION IN BIOTECHNOLOGY 14(1):82-86
Gullberg M; Fredriksson S; Taussig M; Jarvius J; Gustafsdottir S; Landegren U
A sense of closeness: protein detection by proximity ligation
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6214031 2003 CURRENT OPINION IN CELL BIOLOGY 15(2):199-205
Drewes G; Bouwmeester T
Global approaches to protein-protein interactions
07
6315332 2003 CURRENT OPINION IN MICROBIOLOGY 6(5):446-451
Paulsen IT
Multidrug efflux pumps and resistance: regulation and evolution
00
6413133 2003 CURRENT OPINION IN PLANT BIOLOGY 6(4):334-338
Peck SC
Early phosphorylation events in biotic stress
00
6512035 2003 DNA RESEARCH 10(1):19-25
Savoie CJ; Aburatani S; Watanabe S; Eguchi Y; Muta S; Imoto S; Miyano S; Kuhara S; Tashiro K
Use of gene networks from full genome microarray libraries to identify functionally relevant drug-affected genes and gene regulation cascades
03
6614436 2003 EMBO JOURNAL 22(14):3664-3674
Dilcher M; Veith B; Chidambaram S; Hartmann E; Schmitt HD; von Mollard GF
Use1p is a yeast SNARE protein required for retrograde traffic to the ER
05
6715637 2003 EMBO JOURNAL 22(18):4826-4835
Roy A; Solodovnikova N; Nicholson T; Antholine W; Walden WE
A novel eukaryotic factor for cytosolic Fe-S cluster assembly
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6815738 2003 ENDOCRINOLOGY 144(7):3148-3158
Oltra E; Pfeifer I; Werner R
Ini, a small nuclear protein that enhances the response of the connexin43 gene to estrogen
01
6913839 2003 ENZYME AND MICROBIAL TECHNOLOGY 33(2-3):163-172
Katz M; Hahn-Hagerdal B; Gorwa-Grauslund MF
Screening of two complementary collections of Saccharomyces cerevisiae to identify enzymes involved in stereo-selective reductions of specific carbonyl compounds: an alternative to protein purification
01
7035440 2003 EUKARYOTIC CELL 2(2):247-255
Firon A; Villalba F; Beffa R; d'Enfert C
Identification of essential genes in the human fungal pathogen Aspergillus fumigatus by transposon mutagenesis
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7115641 2003 EUKARYOTIC CELL 2(3):588-598
Mason DL; Mallampalli MP; Huyer G; Michaelis S
A region within a lumenal loop of Saccharomyces cerevisiae Ycf1p directs proteolytic processing and substrate specificity
00
7213942 2003 EUKARYOTIC CELL 2(4):746-755
Spreghini E; Davis DA; Subaran R; Kim M; Mitchell AP
Roles of Candida albicans Dfg5p and Dcw1p cell surface proteins in growth and hypha formation
01
7315043 2003 EUKARYOTIC CELL 2(5):937-948
Ruiz A; Yenush L; Arino J
Regulation of ENA1 Na+-ATPase gene expression by the Ppz1 protein phosphatase is mediated by the calcineurin pathway
01
7412444 2003 FEBS LETTERS 555(3):464-468
Thompson GM; Cano VSP; Valentini SR
Mapping eIF5A binding sites for Dys1 and Lia1: in vivo evidence for regulation of eIF5A hypusination
00
75222046 2003 GENE 313():17-42
Fromont-Racine M; Senger B; Saveanu C; Fasiolo F
Ribosome assembly in eukaryotes
02
7613347 2003 GENE 320():137-144
Gecz J; Shaw MA; Bellon JR; Lopes MDB
Human wild-type SEDL protein functionally complements yeast Trs20p but some naturally occurring SEDL mutants do not
00
7715048 2003 GENES & DEVELOPMENT 17(21):2698-2708
Kafadar KA; Zhu H; Snyder M; Cyert MS
Negative regulation of calcineurin signaling by Hrr25p, a yeast homolog of casein kinase I
00
7824350 2003 GENETICS 163(1):79-89
Winzeler EA; Castillo-Davis CI; Oshiro G; Liang D; Richards DR; Zhou YY; Hartl DL
Genetic diversity in yeast assessed with whole-genome oligonucleotide arrays
04
7916353 2003 GENETICS 165(1):35-45
Dunn CD; Jensen RE
Suppression of a defect in mitochondrial protein import identifies cytosolic proteins required for viability of yeast cells lacking mitochondrial DNA
00
8014754 2003 GENOME BIOLOGY 4(7):-
Brachat S; Dietrich FS; Voegeli S; Zhang ZH; Stuart L; Lerch A; Gates K; Gaffney T; Philippsen P
Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii
05
#LCRNCRNodes / Authors / DateLCSGCS
8123255 2003 GENOME BIOLOGY 4(10):-
Granneman S; Baserga SJ
Probing the yeast proteome for RNA-processing factors
00
8221956 2003 GENOME BIOLOGY 4(10):-
Aparicio OM
Tackling an essential problem in functional proteomics of Saccharomyces cerevisiae
00
8311957 2003 GENOME RESEARCH 13(3):524-530
Till BJ; Reynolds SH; Greene EA; Codomo CA; Enns LC; Johnson JE; Burtner C; Odden AR; Young K; Taylor NE; Henikoff JG; Comai L; Henikoff S
Large-scale discovery of induced point mutations with high-throughput TILLING
011
8413958 2003 GENOME RESEARCH 13(12):2708-2716
Lee DK; Park JW; Kim YJ; Kim J; Lee Y; Kim J; Kim JS
Toward a functional annotation of the human genome using artificial transcription factors
00
8517562 2003 JOURNAL OF BIOLOGICAL CHEMISTRY 278(37):34998-35015
Agarwal AK; Rogers PD; Baerson SR; Jacob MR; Barker KS; Cleary JD; Walker LA; Nagle DG; Clark AM
Genome-wide expression profiling of the response to polyene, pyrimidine, azole, and echinocandin antifungal agents in Saccharomyces cerevisiae
03
8615363 2003 JOURNAL OF BIOLOGICAL CHEMISTRY 278(50):49868-49873
Subhi AL; Diegelman P; Porter CW; Tang BQ; Lu ZCJ; Markham GD; Kruger WD
Methylthioadenosine phosphorylase regulates ornithine decarboxylase by production of downstream metabolites
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Sato TK; Panda S; Kay SA; Hogenesch JB
DNA arrays: Applications and implications for circadian biology
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8813766 2003 JOURNAL OF CELL SCIENCE 116(10):2005-2014
Jakobs S; Martini N; Schauss AC; Egner A; Westermann B; Hell SW
Spatial and temporal dynamics of budding yeast mitochondria lacking the division component Fis1p
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Honigberg SM; Purnapatre K
Signal pathway integration in the switch from the mitotic cell cycle to meiosis in yeast
04
9013868 2003 JOURNAL OF CELLULAR BIOCHEMISTRY 88(4):684-694
Urnov FD
Chromatin remodeling as a guide to transcriptional regulatory networks in mammals
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9114372 2003 MOLECULAR AND CELLULAR BIOLOGY 23(19):6982-6992
Mitchell P; Petfalski E; Houalla R; Podtelejnikov A; Mann M; Tollervey D
Rrp47p is an exosome-associated protein required for the 3 ' processing of stable RNAs
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Wang Q; Rymond BC
Rds3p is required for stable U2 snRNP recruitment to the splicing apparatus
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Bonnerot C; Pintard L; Lutfalla G
Functional redundancy of Spb1p and a snR52-dependent mechanism for the 2 '-O-ribose methylation of a conserved rRNA position in yeast
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Roemer T; Jiang B; Davison J; Ketela T; Veillette K; Breton A; Tandia F; Linteau A; Sillaots S; Marta C; Martel N; Veronneau S; Lemieux S; Kauffman S; Becker J; Storms R; Boone C; Bussey H
Large-scale essential gene identification in Candida albicans and applications to antifungal drug discovery
00
9512879 2003 NATURE 422(6928):193-197
Tyers M; Mann M
From genomics to proteomics
033
9612782 2003 NATURE 424(6948):549-552
Bergman A; Siegal ML
Evolutionary capacitance as a general feature of complex gene networks
07
97111584 2003 NATURE GENETICS 33():276-284
Nagy A; Perrimon N; Sandmeyer S; Plasterk R
Tailoring the genome: the power of genetic approaches
02
98122185 2003 NATURE GENETICS 33():294-304
Pruitt RE; Bowman JL; Grossniklaus U
Plant genetics: a decade of integration
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9914086 2003 NATURE GENETICS 35(1):57-64
Yvert G; Brem RB; Whittle J; Akey JM; Foss E; Smith EN; Mackelprang R; Kruglyak L
Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors
03
10017388 2003 NATURE REVIEWS CANCER 3(10):781-789
Brummelkamp TR; Bernards R
Innovation - New tools for functional mammalian cancer genetics
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10117190 2003 NATURE REVIEWS MICROBIOLOGY 1(2):127-136
Koonin EV
Comparative genomics, minimal gene-sets and the last universal common ancestor
01
1021992 2003 NUCLEIC ACIDS RESEARCH 31(1):90-93
Tzafrir I; Dickerman A; Brazhnik O; Nguyen Q; McElver J; Frye C; Patton D; Meinke D
The Arabidopsis SeedGenes Project
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10311893 2003 PHYSICAL REVIEW LETTERS 91(13):-
Tannenbaum E; Deeds EJ; Shakhnovich EI
Equilibrium distribution of mutators in the single fitness peak model
01
10414195 2003 PLANT JOURNAL 35(1):33-43
Rider SD; Henderson JT; Jerome RE; Edenberg HJ; Romero-Severson J; Ogas J
Coordinate repression of regulators of embryonic identity by PICKLE during germination in Arabidopsis
03
10514096 2003 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100(12):6969-6973
Bushnell DA; Kornberg RD
Complete, 12-subunit RNA polymerase II at 4.1-angstrom resolution: Implications for the initiation of transcription
017
10613197 2003 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100(12):7213-7218
Lamichhane G; Zignol M; Blades NJ; Geiman DE; Dougherty A; Grosset J; Broman KW; Bishai WR
A postgenomic method for predicting essential genes at subsaturation levels of mutagenesis: Application to Mycobacterium tuberculosis
05
10714998 2003 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100(18):10370-10375
Lu P; Nakorchevskiy A; Marcotte EM
Expression deconvolution: A reinterpretation of DNA microarray data reveals dynamic changes in cell populations
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Widespread cytoplasmic mRNA transport in yeast: Identification of 22 bud-localized transcripts using DNA microarray analysis
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The proteome of Saccharomyces cerevisiae mitochondria
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Comprehensive transposon mutant library of Pseudomonas aeruginosa
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High-resolution yeast phenomics resolves different physiological features in the saline response
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Saccharomyces gene deletion project: Applications and use in the study of protein kinases and phosphatases
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In vivo analysis of nucleolar proteins modified by the yeast arginine methyltransferase Hmt1/Rmt1p
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Rising to the occasion
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Yeast functional analysis: Identification of two essential genes involved in ER to Golgi trafficking
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Panda S; Sato TK; Hampton GM; Hogenesch JB
An array of insights: application of DNA chip technology in the study of cell biology
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Integrating 'omic' information: a bridge between genomics and systems biology
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Mitochondrial genomes: anything goes
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In search of the minimal Escherichia coli genome
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A chemical genomics approach to understanding drug action
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Wright R; Parrish ML; Cadera E; Larson L; Matson CK; Garrett-Engele P; Armour C; Lum PY; Shoemaker DD
Parallel analysis of tagged deletion mutants efficiently identifies genes involved in endoplasmic reticulum biogenesis
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High-throughput phenotypic profiling of gene-environment interactions by quantitative growth curve analysis in Saccharomyces cerevisiae
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Eriksson P; Thomas LR; Thorburn A; Stillman DJ
pRS yeast vectors with a LYS2 marker
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Upstream plasticity and downstream robustness in evolution of molecular networks
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A genome-wide screen in Saccharomyces cerevisiae reveals altered transport as a mechanism of resistance to the anticancer drug bleomycin
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Physiological functions of multidrug transporters in yeast
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C-elegans pro-1 activity is required for soma/germline interactions that influence proliferation and differentiation in the germ line
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Three modules of zebrafish Mind bomb work cooperatively to promote Delta ubiquitination and endocytosis
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Regulatory network connecting two glucose signal transduction pathways in Saccharomyces cerevisiae
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Characterization of the products of the genes SNO1 and SNZ1 involved in pyridoxine synthesis in Saccharomyces cerevisiae
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GSK-3 kinases enhance calcineurin signaling by phosphorylation of RCNs
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The yeast splicing factor Prp40p contains functional leucine-rich nuclear export signals that are essential for splicing
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Identification of Edc3p as an enhancer of mRNA decapping in Saccharomyces cerevisiae
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A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes
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Control of yeast filamentous-form growth by modules in an integrated molecular network
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Yeast as a touchstone in post-genomic research: Strategies for integrative analysis in functional genomics
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Cardiolipin is not required for Bax-mediated cytochrome c release from yeast mitochondria
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The specificities of four yeast dihydrouridine synthases for cytoplasmic tRNAs
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Proteomics and disease - The challenges for technology and discovery
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Microsatellite PCR profiling of Saccharomyces cerevisiae strains during wine fermentation
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Lessons from the genome sequence of Neurospora crassa: Tracing the path from genomic blueprint to multicellular organism
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Synergistic computational and experimental proteomics approaches for more accurate detection of active serine hydrolases in yeast
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The protein kinase snf1 is required for tolerance to the ribonucleotide reductase inhibitor hydroxyurea
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An analysis of determinants of amino acids substitution rates in bacterial proteins
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Pex30p, Pex3lp, and Pex32p form a family of peroxisomal integral membrane proteins regulating peroxisome size and number in Saccharomyces cerevisiae
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S-phase checkpoint genes safeguard high-fidelity sister chromatid cohesion
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The serine/threonine protein phosphatase SIT4 modulates yeast-to-hypha morphogenesis and virulence in Candida albicans
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Editorial policy on genome-scale analyses
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A resource for large-scale RNA-interference-based screens in mammals
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Principles of transcriptional control in the metabolic network of Saccharomyces cerevisiae
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Systematic genome-wide screens of gene function
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Network biology: Understanding the cell's functional organization
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Maximizing the potential of functional genomics
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SCMD: Saccharomyces cerevisiae Morphological Database
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GermOnline, a cross-species community knowledgebase on germ cell differentiation
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ESF1 is required for 18S rRNA synthesis in Saccharomyces cerevisiae
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Nutritional Genomics in yeast models
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On systems thinking, systems biology, and the in silico plant
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Similarities and differences in genome-wide expression data of six organisms
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Chemogenomic profiling: Identifying the functional interactions of small molecules in yeast
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The gene for soluble N-ethylmaleimide sensitive factor attachment protein alpha is mutated in hydrocephaly with hop gait (hyh) mice
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Revealing modularity and organization in the yeast molecular network by integrated analysis of highly heterogeneous genomewide data
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Johansson MJO; Bystrom AS
The Saccharomyces cerevisiae TAN1 gene is required for N-4-acetylcytidine formation in tRNA
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Global mapping of the yeast genetic interaction network
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Genome-wide RNAi analysis of growth and viability in Drosophila cells
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Marston AL; Tham WH; Shah H; Amon A
A genome-wide screen identifies genes required for centromeric cohesion
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Alanine : glyoxylate aminotransferase of Saccharomyces cerevisiae-encoding gene AGX1 and metabolic significance
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Riles L; Shaw RJ; Johnston M; Reines D
Large-scale screening of yeast mutants for sensitivity to the IMP dehydrogenase inhibitor 6-azauracil
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