Nodes: 135, Authors: 466, Sources: 56, Outer References: 4735
Collection span: 2002 - 2004
View: Overview. Sorted by year, source, volume, issue, page.

#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
1	1	39	1 2002 ANALYTICAL CHEMISTRY 74(15):413A-419A Figeys D Proteomics approaches in drug discovery	0	1
2	1	30	2 2002 ANALYTICAL CHEMISTRY 74(22):5701-5710 Li W; Boykins RA; Backlund PS; Wang GY; Chen HC Identification of phosphoserine and phosphothreonine as cysteic acid and beta-methylcysteic acid residues in peptides by tandem mass spectrometric sequencing	4	7
3	1	35	3 2002 BIOTECHNIQUES 33(6):1308-1316 Michaud GA; Snyder M Proteomic approaches for the global analysis of proteins	0	3
4	1	58	4 2002 CURRENT OPINION IN CHEMICAL BIOLOGY 6(4):418-426 Quinn-Senger KE; Ramachandran R; Rininger JA; Kelly KM; Lewin DA Staking out novelty on the genomic frontier	0	1
5	1	116	5 2002 CURRENT OPINION IN CHEMICAL BIOLOGY 6(5):666-675 Mo WJ; Karger BL Analytical aspects of mass spectrometry and proteomics	1	6
6	1	20	6 2002 CURRENT OPINION IN MOLECULAR THERAPEUTICS 4(3):210-215 Figeys D Functional proteomics: Mapping protein-protein interactions and pathways	0	8
7	1	29	7 2002 CURRENT OPINION IN MOLECULAR THERAPEUTICS 4(3):242-250 Wu CC; MacCoss MJ Shotgun proteomics: Tools for the analysis of complex biological systems	0	7
8	1	35	8 2002 CURRENT OPINION IN MOLECULAR THERAPEUTICS 4(3):251-258 Rohlff C; Southan C Proteomic approaches to central nervous system disorders	0	1
9	2	74	9 2002 CURRENT OPINION IN MOLECULAR THERAPEUTICS 4(6):577-586 Domon B; Alving K; He T; Ryan TE; Patterson SD Enabling parallel protein analysis through mass spectrometry	0	3
10	1	28	10 2002 DISEASE MARKERS 18(2):99-105 McDonald WH; Yates JR Shotgun proteomics and biomarker discovery	2	21
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
11	1	90	11 2002 ELECTROPHORESIS 23(17):3048-3061 Issaq HJ; Conrads TP; Janini GM; Veenstra TD Methods for fractionation, separation and profiling of proteins and peptides	0	16
12	1	32	12 2002 IUBMB LIFE 54(2):51-57 Sickmann A; Mreyen M; Meyer HE Identification of modified proteins by mass spectrometry	1	4
13	2	48	13 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(42):39379-39387 Zhang H; Zha XM; Tan Y; Hornbeck PV; Mastrangelo AJ; Alessi DR; Polakiewicz RD; Comb MJ Phosphoprotein analysis using antibodies broadly reactive against phosphorylated motifs	4	18
14	1	184	14 2002 JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES 782(1-2):165-181 Hunter TC; Andon NL; Koller A; Yates JR; Haynes PA The functional proteomics toolbox: methods and applications	0	2
15	1	188	15 2002 MASS SPECTROMETRY REVIEWS 21(5):305-348 Rusconi F; Guillonneau F; Praseuth D Contributions of mass spectrometry in the study of nucleic acid-binding proteins and of nucleic acid-protein interactions	0	1
16	1	21	16 2002 MOLECULAR & CELLULAR PROTEOMICS 1(4):314-322 MacDonald JA; Mackey AJ; Pearson WR; Haystead TAJ A strategy for the rapid identification of phosphorylation sites in the phosphoproteome	5	9
17	1	54	17 2002 MOLECULAR & CELLULAR PROTEOMICS 1(8):553-560 Morrison RS; Kinoshita Y; Johnson MD; Uo T; Ho JT; McBee JK; Conrads TP; Veenstra TD Proteomic analysis in the neurosciences	0	3
18	1	56	18 2002 MOLECULAR & CELLULAR PROTEOMICS 1(10):781-790 Adam GC; Sorensen EJ; Cravatt BF Chemical strategies for functional proteomics	4	16
19	2	54	19 2002 MOLECULAR & CELLULAR PROTEOMICS 1(10):791-804 Wells L; Vosseller K; Cole RN; Cronshaw JM; Matunis MJ; Hart GW Mapping sites of O-GlcNAc modification using affinity tags for serine and threonine post-translational modifications	9	20
20	1	24	20 2002 MOLECULAR & CELLULAR PROTEOMICS 1(11):896-903 Gevaert K; Van Damme J; Goethals M; Thomas GR; Hoorelbeke B; Demol H; Martens L; Puype M; Staes A; Vandekerckhove J Chromatographic isolation of methionine-containing peptides for gel-free proteome analysis - Identification of more than 800 Escherichia coli proteins	2	10
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
21	0	10	21 2002 NATURE BIOTECHNOLOGY 20(3):301-305 Ficarro SB; McCleland ML; Stukenberg PT; Burke DJ; Ross MM; Shabanowitz J; Hunt DF; White FM Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae	134	134
22	1	67	22 2002 TRENDS IN BIOTECHNOLOGY 20(6):261-268 Mann M; Ong SE; Gronborg M; Steen H; Jensen ON; Pandey A Analysis of protein phosphorylation using mass spectrometry: deciphering the phosphoproteome	27	48
23	1	46	23 2002 TRENDS IN BIOTECHNOLOGY 20(12):S8-S13 Link AJ Multidimensional peptide separations in proteomics	0	9
24	1	43	24 2002 TRENDS IN BIOTECHNOLOGY 20(12):S23-S29 Flory MR; Griffin TJ; Martin D; Aebersold R Advances in quantitative proteomics using stable isotope tags	0	11
25	1	51	25 2002 TRENDS IN BIOTECHNOLOGY 20(12):S45-S51 Ryan TE; Patterson SD Proteomics: drug target discovery on an industrial scale	0	6
26	1	53	26 2003 ACCOUNTS OF CHEMICAL RESEARCH 36(6):378-384 Pinna LA The raison D'Etre of constitutively active protein kinases: The lesson of CK2	0	1
27	1	49	27 2003 ACCOUNTS OF CHEMICAL RESEARCH 36(6):453-461 Schweppe RE; Haydon CE; Lewis TS; Resing KA; Ahn NG The characterization of protein post-translational modifications by mass spectrometry	3	4
28	2	21	28 2003 ACTA BIOCHIMICA ET BIOPHYSICA SINICA 35(5):459-466 Wang JL; Zhang YJ; Cai Y; Li L; Liu SY; Yang HY; Qian XH Analysis of protein phosphorylation by combination of IMAC, phosphatase with biological mass spectrometry	0	0
29	2	32	29 2003 ANALYTICAL AND BIOANALYTICAL CHEMISTRY 376(3):366-373 Thaler F; Valsasina B; Baldi R; Jin X; Stewart A; Isacchi A; Kalisz HM; Rusconi L A new approach to phosphoserine and phosphothreonine analysis in peptides and proteins: chemical modification, enrichment via solid-phase reversible binding, and analysis by mass spectrometry	0	1
30	1	36	30 2003 ANALYTICAL BIOCHEMISTRY 317(1):26-33 Wind M; Gosenca D; Kubler D; Lehmann WD Stable isotope phospho-profiling of fibrinogen and fetuin subunits by element mass spectrometry coupled to capillary liquid chromatography	1	1
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
31	1	41	31 2003 ANALYTICAL BIOCHEMISTRY 319(1):143-158 Salih E Synthesis of a radioactive thiol reagent, I-S-[H-3]carboxymethyl-dithiothreitol: identification of the phosphorylation sites by N-terminal peptide sequencing and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry	0	0
32	2	48	32 2003 ANALYTICAL BIOCHEMISTRY 320(2):214-222 Nikov G; Bhat V; Wishnok JS; Tannenbaum SR Analysis of nitrated proteins by nitrotyrosine-specific affinity probes and mass spectrometry	1	2
33	1	21	33 2003 ANALYTICAL CHEMISTRY 75(8):1819-1827 Xiang R; Horvath C; Wilkins JA Elution-modified displacement chromatography coupled with electrospray ionization-MS: On-line detection of trace peptides at femtomole level in peptide digests	1	3
34	1	30	34 2003 ANALYTICAL CHEMISTRY 75(8):1895-1904 Thompson A; Schafer J; Kuhn K; Kienle S; Schwarz J; Schmidt G; Neumann T; Hamon C Tandem mass tags: A novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS	0	1
35	1	46	35 2003 ANALYTICAL CHEMISTRY 75(10):2309-2315 Ericson C; Phung QT; Horn DM; Peters EC; Fitchett JR; Ficarro SB; Salomon AR; Brill LM; Brock A An automated noncontact deposition interface for liquid chromatography matrix-assisted laser desorption/ionization mass spectrometry	0	6
36	2	33	36 2003 ANALYTICAL CHEMISTRY 75(10):2370-2376 Willard BB; Ruse CI; Keightley JA; Bond M; Kinter M Site-specific quantitation of protein nitration using liquid chromatography/tandem mass spectrometry	1	1
37	2	26	37 2003 ANALYTICAL CHEMISTRY 75(11):2724-2729 Salek M; Alonso A; Pipkorn R; Lehmann WD Analysis of protein tyrosine phosphorylation by nanoelectrospray ionization high-resolution tandem mass spectrometry and tyrosine-targeted product ion scanning	2	2
38	5	203	38 2003 ANALYTICAL CHEMISTRY 75(12):2891-2905 Figeys D Proteomics in 2002: A year of technical development and wide-ranging applications	0	4
39	2	51	39 2003 ANALYTICAL CHEMISTRY 75(13):3232-3243 Thompson AJ; Hart SR; Franz C; Barnouin K; Ridley A; Cramer R Characterization of protein phosphorylation by mass spectrometry using immobilized metal ion affinity chromatography with on-resin beta-elimination and Michael addition	1	2
40	1	37	40 2003 ANALYTICAL CHEMISTRY 75(15):3751-3757 Zhao YX; Zhang W; White MA; Zhao YM Capillary high-performance liquid chromatography/mass spectrometric analysis of proteins from affinity-purified plasma membrane	0	1
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
41	1	35	41 2003 ANALYTICAL CHEMISTRY 75(16):4081-4086 Taylor GK; Kim YB; Forbes AJ; Meng FY; McCarthy R; Kelleher NL Web and database software for identification of intact proteins using "top down" mass spectrometry	2	7
42	3	32	42 2003 ANALYTICAL CHEMISTRY 75(20):5441-5450 Qian WJ; Gosche MB; Camp DG; Yu LR; Tang KQ; Smith RD Phosphoprotein isotope-coded solid-phase tag approach for enrichment and quantitative analysis of phosphopeptides from complex mixtures	0	0
43	4	41	43 2003 ANALYTICAL CHEMISTRY 75(24):6826-6836 McLachlin DT; Chait BT Improved beta-elimination-based affinity purification strategy for enrichment of phosphopeptides	1	1
44	1	104	44 2003 ANNUAL REVIEW OF BIOCHEMISTRY 72():783-812 Zhu H; Bilgin M; Snyder M Proteomics	1	5
45	1	74	45 2003 ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE 32():399-424 Ferguson PL; Smith RD Proteome analysis by mass spectrometry	0	4
46	2	108	46 2003 ANNUAL REVIEW OF PLANT BIOLOGY 54():669-689 Weckwerth W Metabolomics in systems biology	1	4
47	1	38	47 2003 BIOLOGICAL PSYCHIATRY 53(10):847-853 Rohlff C; Hollis K Modern proteomic strategies in the study of complex neuropsychiatric disorders	0	3
48	4	45	48 2003 BIOTECHNIQUES 35(3):440-444 Patterson SD Proteomics: evolution of the technology	0	0
49	1	30	49 2003 CELLULAR AND MOLECULAR LIFE SCIENCES 60(2):422-429 Bandholtz L; Guo Y; Palmberg C; Mattsson K; Ohlsson B; High A; Shabanowitz J; Hunt DF; Jornvall H; Wigzell H; Agerberth B; Gudmundsson GH Hsp90 binds CpG oligonucleotides directly: implications for Hsp90 as a missing link in CpG signaling and recognition	0	7
50	1	55	50 2003 CURRENT OPINION IN BIOTECHNOLOGY 14(1):101-109 Goshe MB; Smith RD Stable isotope-coded proteomic mass spectrometry	4	15
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
51	1	45	51 2003 CURRENT OPINION IN BIOTECHNOLOGY 14(1):110-118 Tao WA; Aebersold R Advances in quantitative proteomics via stable isotope tagging and mass spectrometry	3	15
52	3	36	52 2003 CURRENT OPINION IN CHEMICAL BIOLOGY 7(1):64-69 Kalume DE; Molina H; Pandey A Tackling the phosphoproteome: tools and strategies	2	7
53	1	54	53 2003 CURRENT OPINION IN CHEMICAL BIOLOGY 7(1):70-77 Sechi S; Oda Y Quantitative proteomics using mass spectrometry	1	6
54	4	64	54 2003 CURRENT OPINION IN MOLECULAR THERAPEUTICS 5(3):285-293 Kislinger T; Emili A Going global: Protein expression profiling using shotgun mass spectrometry	0	0
55	2	40	55 2003 CURRENT OPINION IN MOLECULAR THERAPEUTICS 5(3):302-309 McDonald WH; Yates JR Shotgun proteomics: Integrating technologies to answer biological questions	1	3
56	3	45	56 2003 CURRENT OPINION IN NEUROBIOLOGY 13(5):577-582 Grant SGN Systems biology in neuroscience: bridging genes to cognition	0	0
57	1	31	57 2003 CURRENT OPINION IN PLANT BIOLOGY 6(4):334-338 Peck SC Early phosphorylation events in biotic stress	0	0
58	1	32	58 2003 DEVELOPMENTAL CELL 4(3):345-357 Dobbelaere J; Gentry MS; Hallberg RL; Barral Y Phosphorylation-dependent regulation of septin dynamics during the cell cycle	0	11
59	1	24	59 2003 ELECTROPHORESIS 24(16):2855-2863 Zhang W; Zhou G; Zhao YX; White MA; Zhao YM Affinity enrichment of plasma membrane for proteomics analysis	0	2
60	2	104	60 2003 EUROPEAN JOURNAL OF BIOCHEMISTRY 270(4):579-588 Fiehn O; Weckwerth W Deciphering metabolic networks	1	3
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
61	3	86	61 2003 EXPERIMENTAL GERONTOLOGY 38(5):473-481 Schoneich C Proteomics in gerontological research	0	1
62	1	221	62 2003 FASEB JOURNAL 17(3):349-368 Meggio F; Pinna LA One-thousand-and-one substrates of protein kinase CK2?	0	27
63	1	220	63 2003 GENE 313():17-42 Fromont-Racine M; Senger B; Saveanu C; Fasiolo F Ribosome assembly in eukaryotes	0	2
64	1	81	64 2003 GENETIC EPIDEMIOLOGY 24(2):83-98 Sellers TA; Yates JR Review of proteomics with applications to genetic epidemiology	0	4
65	1	43	65 2003 JOURNAL OF BIOLOGICAL CHEMISTRY 278(13):11579-11589 Ficarro S; Chertihin O; Westbrook VA; White F; Jayes F; Kalab P; Marto JA; Shabanowitz J; Herr JC; Hunt DF; Visconti PE Phosphoproteome analysis of capacitated human sperm - Evidence of tyrosine phosphorylation of a kinase-anchoring protein 3 and valosin-containing protein/p97 during capacitation	9	20
66	1	36	66 2003 JOURNAL OF BIOLOGICAL CHEMISTRY 278(37):34897-34909 Belham C; Roig J; Caldwell JA; Aoyama Y; Kemp BE; Comb M; Avruch J A mitotic cascade of NIMA family kinases - Nercc1/Nek9 activates the Nek6 and Nek7 kinases	0	0
67	2	36	67 2003 JOURNAL OF BIOLOGICAL CHEMISTRY 278(52):51989-51992 Cohen M; Stutz F; Dargemont C Deubiquitination, a new player in Golgi to endoplasmic reticulum retrograde transport	0	1
68	2	29	68 2003 JOURNAL OF CELL BIOLOGY 161(3):465-469 Aitchison JD; Galitski T Inventories to insights	1	1
69	2	111	69 2003 JOURNAL OF CHROMATOGRAPHY A 1000(1-2):589-608 Romijn EP; Krijgsveld J; Heck AJR Recent liquid chromatographic-(tandem) mass spectrometric applications in proteomics	0	3
70	1	57	70 2003 JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES 787(1):53-61 Kovarova H; Hajduch M; Livingstone M; Dzubak P; Lefkovits I Analysis of state-specific phosphorylation of proteins by two-dimensional gel electrophoresis approach	0	0
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
71	1	19	71 2003 JOURNAL OF MASS SPECTROMETRY 38(2):131-137 Kocher T; Allmaier G; Wilm M Nanoelectrospray-based detection and sequencing of substoichiometric amounts of phosphopeptides in complex mixtures	1	1
72	1	72	72 2003 JOURNAL OF PROTEOME RESEARCH 2(1):69-79 Basrur V; Yang F; Kushimoto T; Higashimoto Y; Yasumoto K; Valencia J; Muller J; Vieira WD; Watabe H; Shabanowitz J; Hearing VJ; Hunt DF; Appella E Proteomic analysis of early melanosomes: Identification of novel melanosomal proteins	1	9
73	2	74	73 2003 JOURNAL OF PROTEOME RESEARCH 2(4):373-382 Chalmers MJ; Quinn JP; Blakney GT; Emmett MR; Mischak H; Gaskell SJ; Marshall AG Liquid chromatography-Fourier transform ion cyclotron resonance mass spectrometric characterization of protein kinase C phosphorylation	3	4
74	1	28	74 2003 JOURNAL OF PROTEOME RESEARCH 2(6):589-597 Moon MH; Myung S; Plasencia M; Hilderbrand AE; Clemmer DE Nanoflow LC/ion mobility/CID/TOF for proteomics: analysis of a human urinary Proteome	0	0
75	2	26	75 2003 JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 14(9):1003-1011 Wagner Y; Sickmann A; Meyer HE; Daum G Multidimensional nano-HPLC for analysis of protein complexes	0	1
76	1	37	76 2003 JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 14(9):1022-1031 Guo L; Kozlosky CJ; Ericsson LH; Daniel TO; Cerretti DP; Johnson RS Studies of ligand-induced site-specific phosphorylation of epidermal growth factor receptor	0	0
77	5	106	77 2003 MOLECULAR & CELLULAR PROTEOMICS 2(4):215-233 Machida K; Mayer BJ; Nollau P Profiling the global tyrosine phosphorylation state	0	1
78	2	19	78 2003 MOLECULAR & CELLULAR PROTEOMICS 2(4):242-247 Kwon SW; Kim SC; Jaunbergs J; Falck JR; Zhao YM Selective enrichment of thiophosphorylated polypeptides as a tool for the analysis of protein phosphorylation	0	0
79	1	50	79 2003 MOLECULAR & CELLULAR PROTEOMICS 2(8):550-559 Hansson M; Vener AV Identification of three previously unknown in vivo protein phosphorylation sites in thylakoid membranes of Arabidopsis thaliana	0	1
80	4	40	80 2003 MOLECULAR & CELLULAR PROTEOMICS 2(10):1055-1067 Haydon CE; Eyers PA; Aveline-Wolf LD; Resing KA; Maller JL; Ahn NG Identification of novel phosphorylation sites on Xenopus laevis aurora A and analysis of phosphopeptide enrichment by immobilized metal-affinity chromatography	1	3
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
81	8	50	81 2003 MOLECULAR & CELLULAR PROTEOMICS 2(11):1234-1243 Nuhse TS; Stensballe A; Jensen ON; Peck SC Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry	2	2
82	1	42	82 2003 MOLECULAR AND CELLULAR BIOLOGY 23(23):8718-8728 Schindler K; Benjamin KR; Martin A; Boglioli A; Herskowitz I; Winter E The Cdk-activating kinase Cak1p promotes meiotic S phase through Ime2p	0	0
83	1	28	83 2003 NATURE 422(6928):193-197 Tyers M; Mann M From genomics to proteomics	2	33
84	3	91	84 2003 NATURE 422(6928):198-207 Aebersold R; Mann M Mass spectrometry-based proteomics	5	103
85	1	30	85 2003 NATURE 425(6960):859-864 Ubersax JA; Woodbury EL; Quang PN; Paraz M; Blethrow JD; Shah K; Shokat KM; Morgan DO Targets of the cyclin-dependent kinase Cdk1	0	5
86	4	59	86 2003 NATURE BIOTECHNOLOGY 21(3):255-261 Mann M; Jensen ON Proteomic analysis of post-translational modifications	4	22
87	1	39	87 2003 NATURE BIOTECHNOLOGY 21(3):262-267 Wu CC; Yates JR The application of mass spectrometry to membrane proteomics	1	18
88	1	38	88 2003 NATURE BIOTECHNOLOGY 21(5):532-538 Wu CC; MacCoss MJ; Howell KE; Yates JR A method for the comprehensive proteomic analysis of membrane proteins	4	26
89	1	43	89 2003 NATURE BIOTECHNOLOGY 21(6):660-666 Zhang H; Li XJ; Martin DB; Aebersold R Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry	7	13
90	1	23	90 2003 NATURE BIOTECHNOLOGY 21(6):667-672 Kaji H; Saito H; Yamauchi Y; Shinkawa T; Taoka M; Hirabayashi J; Kasai K; Takahashi N; Isobe T Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins	4	8
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
91	1	29	91 2003 NATURE BIOTECHNOLOGY 21(8):921-926 Peng JM; Schwartz D; Elias JE; Thoreen CC; Cheng DM; Marsischky G; Roelofs J; Finley D; Gygi SP A proteomics approach to understanding protein ubiquitination	4	17
92	3	38	92 2003 NATURE BIOTECHNOLOGY 21(9):1047-1054 Knight ZA; Schilling B; Row RH; Kenski DM; Gibson BW; Shokat KM Phosphospecific proteolysis for mapping sites of protein phosphorylation	4	9
93	1	198	93 2003 NATURE GENETICS 33():311-323 Patterson SD; Aebersold RH Proteomics: the first decade and beyond	1	28
94	1	50	94 2003 NEUROTOXICOLOGY 24(6):761-775 LoPachin RM; Jones RC; Patterson TA; Slikker W; Barber DS Application of proteomics to the study of molecular mechanisms in neurotoxicology	0	0
95	1	51	95 2003 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100(2):443-448 Salomon AR; Ficarro SB; Brill LM; Brinker A; Phung QT; Ericson C; Sauer K; Brock A; Horn DM; Schultz PG; Peters EC Profiling of tyrosine phosphorylation pathways in human cells using mass spectrometry	10	15
96	1	26	96 2003 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100(3):880-885 Bonenfant D; Schmelzle T; Jacinto E; Crespo JL; Mini T; Hall MN; Jenoe P Quantitation of changes in protein phosphorylation: A simple method based on stable isotope labeling and mass spectrometry	2	4
97	2	25	97 2003 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100(16):9232-9237 Corbin RW; Paliy O; Yang F; Shabanowitz J; Platt M; Lyons CE; Root K; McAuliffe J; Jordan MI; Kustu S; Soupene E; Hunt DF Toward a protein profile of Escherichia coli: Comparison to its transcription profile	0	4
98	1	17	98 2003 PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS 30(3):350-356 Jiang Y; Xu LL; He FC Deciphering the phosphoproteome using mass spectrometry	0	0
99	1	86	99 2003 PROGRESS IN NUCLEIC ACID RESEARCH AND MOLECULAR BIOLOGY, VOL 73 73():221-250 Denis CL; Chen JJ The CCR4-NOT complex plays diverse roles in mRNA metabolism	0	5
100	1	33	100 2003 PROTEIN EXPRESSION AND PURIFICATION 28(2):270-279 Haney PJ; Draveling C; Durski W; Romanowich K; Qoronfleh MW SwellGel: a sample preparation affinity chromatography technology for high throughput proteomic applications	0	3
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
101	1	57	101 2003 PROTEOME CHARACTERIZATION AND PROTEOMICS 65():249-269 Issaq HJ Application of separation technologies to proteomics research	0	0
102	1	90	102 2003 PROTEOMICS 3(11):2208-2220 Moritz B; Meyer HE Approaches for the quantification of protein concentration ratios	0	0
103	1	14	103 2003 RAPID COMMUNICATIONS IN MASS SPECTROMETRY 17(7):690-696 Czupalla C; Nurnberg B; Krause E Analysis of class I phosphoinositide 3-kinase autophosphorylation sites by mass spectrometry	0	0
104	2	27	104 2003 RAPID COMMUNICATIONS IN MASS SPECTROMETRY 17(14):1579-1584 Glinski M; Romeis T; Witte CP; Wienkoop S; Weckwerth W Stable isotope labeling of phosphopeptides for multiparallel kinase target analysis and identification of phosphorylation sites	2	3
105	2	53	105 2003 RECENT PROGRESS IN HORMONE RESEARCH, VOL 58 58():1-24 Graves PR; Haystead TAJ A functional proteomics approach to signal transduction	0	2
106	2	148	106 2003 SCIENCE 300(5618):445-452 Pawson T; Nash P Assembly of cell regulatory systems through protein interaction domains	1	40
107	1	56	107 2003 TRAC-TRENDS IN ANALYTICAL CHEMISTRY 22(5):282-+ Goodlett DR; Yi EC Stable isotopic labeling and mass spectrometry as a means to determine differences in protein expression	0	2
108	3	138	108 2003 TRENDS IN CELL BIOLOGY 13(7):344-356 Bader GD; Heilbut A; Andrews B; Tyers M; Hughes T; Boone C Functional genomics and proteomics: charting a multidimensional map of the yeast cell	0	3
109	15	218	109 2004 ANALYTICAL AND BIOANALYTICAL CHEMISTRY 378(4):898-909 Zeller M; Konig S Mass spectrometric phosphorylation analysis	0	0
110	3	79	110 2004 ANALYTICAL BIOCHEMISTRY 324(1):1-10 Lee WC; Lee KH Applications of affinity chromatography in proteomics	0	0
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
111	4	73	111 2004 ANALYTICAL BIOCHEMISTRY 324(2):204-218 Shen J; Smith RA; Stoll VS; Edalji R; Jakob C; Walter K; Gramling E; Dorwin S; Bartley D; Gunasekera A; Yang JG; Holzman T; Johnson RW Characterization of protein kinase A phosphorylation: multi-technique approach to phosphate mapping	0	0
112	5	44	112 2004 ANALYTICAL CHEMISTRY 76(2):267-275 Cargile BJ; Stephenson JL An alternative to tandem mass spectrometry: Isoelectric point and accurate mass for the identification of peptides	0	0
113	19	63	113 2004 CURRENT OPINION IN CHEMICAL BIOLOGY 8(1):33-41 Jensen ON Modification-specific proteomics: characterization of post-translational modifications by mass spectrometry	0	0
114	13	76	114 2004 CURRENT OPINION IN CHEMICAL BIOLOGY 8(1):66-75 Zhang H; Yan W; Aebersold R Chemical probes and tandem mass spectrometry: a strategy for the quantitative analysis of proteomes and subproteomes	0	0
115	4	78	115 2004 CURRENT OPINION IN CHEMICAL BIOLOGY 8(1):81-90 Sharom JR; Bellows DS; Tyers M From large networks to small molecules	0	0
116	1	54	116 2004 DRUG DISCOVERY TODAY 9(2):S41-S46 Sechi S; Oda Y Quantitative proteomics using mass spectrometry	0	0
117	5	196	117 2004 JOURNAL OF BIOCHEMISTRY AND MOLECULAR BIOLOGY 37(1):93-106 Castrillo JO; Oliver SG Yeast as a touchstone in post-genomic research: Strategies for integrative analysis in functional genomics	0	0
118	1	54	118 2004 JOURNAL OF BIOLOGICAL CHEMISTRY 279(11):10176-10184 Chrestensen CA; Schroeder MJ; Shabanowitz J; Hunt DF; Pelo JW; Worthington MT; Sturgill TW MAPKAP kinase 2 phosphorylates tristetraprolin on in vivo sites including Ser(178), a site required for 14-3-3 binding	0	0
119	2	81	119 2004 JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES 803(1):111-120 Chalmers MJ; Kolch W; Emmett MR; Marshall AG; Mischak H Identification and analysis of phosphopeptides	0	0
120	1	43	120 2004 JOURNAL OF MOLECULAR BIOLOGY 337(2):485-496 Boel G; Pichereau V; Mijakovic I; Maze A; Poncet S; Gillet S; Giard JC; Hartke A; Auffray Y; Deutscher J Is 2-phosphoglycerate-dependent automodification of bacterial enolases implicated in their export?	0	0
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121	2	80	121 2004 JOURNAL OF PROTEOME RESEARCH 3(2):179-196 Weston AD; Hood L Systems biology, proteomics, and the future of health care: Toward predictive, preventative, and personalized medicine	0	0
122	4	23	122 2004 JOURNAL OF PROTEOME RESEARCH 3(2):253-260 Domon B; Broder S Implications of new proteomics strategies for biology and medicine	0	0
123	5	112	123 2004 JOURNAL OF PROTEOME RESEARCH 3(2):296-306 Johnson JR; Florens L; Carucci DJ; Yates JR Proteomics in malaria	0	0
124	2	38	124 2004 JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 15(3):363-373 He T; Alving K; Feild B; Norton J; Joseloff EG; Patterson SD; Domon B Quantitation of phosphopeptides using affinity chromatography and stable isotope labeling	0	0
125	2	23	125 2004 MOLECULAR & CELLULAR PROTEOMICS 3(3):266-272 Bieber AL; Tubbs KA; Nelson RW Metal ligand affinity pipettes and bioreactive alkaline phosphatase probes - Tools for characterization of phosphorylated proteins and peptides	0	0
126	5	13	126 2004 MOLECULAR & CELLULAR PROTEOMICS 3(3):279-286 Shu HJ; Chen S; Bi Q; Mumby M; Brekken DL Identification of phosphoproteins and their phosphorylation sites in the WEHI-231 B lymphoma cell line	0	0
127	3	33	127 2004 ORGANIC & BIOMOLECULAR CHEMISTRY 2(1):1-7 Khidekel N; Hsieh-Wilson LC A 'molecular switchboard' - covalent modifications to proteins and their impact on transcription	0	0
128	4	45	128 2004 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101(9):2678-2683 Forbes AJ; Patrie SM; Taylor GK; Kim YB; Jiang LH; Kelleher NL Targeted analysis and discovery of posttranslational modifications in proteins from methanogenic archaea by top-down MS	0	0
129	3	176	129 2004 PROTEOMICS 4(2):285-298 Canovas FM; Dumas-Gaudot E; Recorbet G; Jorrin J; Mock HP; Rossignol M Plant proteome analysis	0	0
130	1	28	130 2004 PROTEOMICS 4(2):454-465 Bunkenborg J; Pilch BJ; Podtelejnikov AV; Wisniewski JR Screening for N-glycosylated proteins by liquid chromatography mass spectrometry	0	0
#	LCR	NCR	Nodes / Authors / Date	LCS	GCS
131	1	24	131 2004 PROTEOMICS 4(3):587-598 Giorgianni F; Beranova-Giorgianni S; Desiderio DM Identification and characterization of phosphorylated proteins in the human pituitary	0	0
132	5	103	132 2004 PROTEOMICS IN NEPHROLOGY 141():59-78 Sechi S Mass spectrometric approaches to quantitative proteomics	0	0
133	2	26	133 2004 PROTEOMICS IN NEPHROLOGY 141():231-244 Barati MT; Powell DW; McLeish KR Proteomic approach to identification of novel kinase substrates in mesangial cells	0	0
134	3	26	134 2004 PROTEOMICS IN NEPHROLOGY 141():308-327 Jain KK Proteomics and drug discovery	0	0
135	1	25	135 2004 TRENDS IN BIOTECHNOLOGY 22(1):4-7 Bodovitz S; Joos T The proteomics bottleneck: strategies for preliminary validation of potential biomarkers and drug targets	0	0

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