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Mon Jan 24 10:44:04 2005
A first-generation linkage disequilibrium map of human chromosome 22
Dawson E, Abecasis GR, Bumpstead S, Chen Y, Hunt S, Beare DM, Pabial J, Dibling T, Tinsley E, Kirby S, Carter D, Papaspyridonos M, Livingstone S, Ganske R, Lohmmussaar E, Zernant J, Tonisson N, Remm M, Magi R, Puurand T, Vilo J, Kurg A, Rice K, Deloukas P, Mott R, Metspalu A, Bentley DR, Cardon LR, Dunham I
NATURE 418 (6897): 544-548 AUG 1 2002
and the citing papers

Nodes: 104, Authors: 689, Journals: 49, Outer References: 2397, Words: 392
Collection span: 2002 - 2004
View: Overview. Sorted by year, source, volume, issue, page.
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
11351 2002 AMERICAN JOURNAL OF HUMAN GENETICS 71(6):1386-1394
Zhang K; Calabrese P; Nordborg M; Sun FZ
Haplotype block structure and its applications to association studies: Power and study designs
1040
21342 2002 EUROPEAN JOURNAL OF HUMAN GENETICS 10(12):870-878
Bader JS; Sham P
Family-based association tests for quantitative traits using pooled DNA
00
32533 2002 HUMAN HEREDITY 54(4):186-198
Nothnagel M; Furst R; Rohde K
Entropy as a measure for linkage disequilibrium over multilocus haplotype blocks
00
41764 2002 IMMUNOLOGICAL REVIEWS 190(1):182-194
Onengut-Gumuscu S; Concannon P
Mapping genes for autoimmunity in humans: type 1 diabetes as a model
010
50305 2002 NATURE 418(6897):544-548
Dawson E; Abecasis GR; Bumpstead S; Chen Y; Hunt S; et al.
A first-generation linkage disequilibrium map of human chromosome 22
103103
61326 2002 NATURE GENETICS 32:522-525
Cheung VG; Spielman RS
The genetics of variation in gene expression
030
71347 2002 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 99(26):16859-16864
Liu H; Abecasis GR; Heath SC; Knowles A; Demars S; et al.
Genetic variation in the 22q11 locus and susceptibility to schizophrenia
018
81258 2002 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 99(26):17004-17007
Zhang WH; Collins A; Maniatis N; Tapper W; Morton NE
Properties of linkage disequilibrium (LD) maps
511
931009 2003 AMERICAN JOURNAL OF HUMAN GENETICS 73(1):5-16
Arnheim N; Calabrese P; Nordborg M
Hot and cold spots of recombination in the human genome: The reason we should find them and how this can be achieved
617
1021410 2003 AMERICAN JOURNAL OF HUMAN GENETICS 73(1):63-73
Zhang K; Sun FZ; Waterman MS; Chen T
Haplotype block partition with limited resources and applications to human chromosome 21 haplotype data
612
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
1111611 2003 AMERICAN JOURNAL OF HUMAN GENETICS 73(1):115-130
Meng ZL; Zaykin DV; Xu CF; Wagner M; Ehm MG
Selection of genetic markers for association analyses, using linkage disequilibrium and haplotypes
623
1225512 2003 AMERICAN JOURNAL OF HUMAN GENETICS 73(2):285-300
Clark AG; Nielsen R; Signorovitch J; Matise TC; Glanowski S; et al.
Linkage disequilibrium and inference of ancestral recombination in 538 single-nucleotide polymorphism clusters across the human genome
822
1354113 2003 AMERICAN JOURNAL OF HUMAN GENETICS 73(3):502-515
Wall JD; Pritchard JK
Assessing the performance of the haplotype block model of linkage disequilibrium
624
1423114 2003 AMERICAN JOURNAL OF HUMAN GENETICS 73(3):580-590
Walsh EC; Mather KA; Schaffner SF; Farwell L; Daly MJ; et al.
An integrated haplotype map of the human major histocompatibility complex
517
1511815 2003 AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS 121B(1):39-43
Philibert R; Caspers K; Langbehn D; Troughton EP; Yucuis R; et al.
The association of the D2S2944 124 bp allele with recurrent early onset major depressive disorder in women
01
1613316 2003 ANNALS OF HUMAN GENETICS 67:487-494
Tapper WJ; Maniatis N; Morton NE; Collins A
A metric linkage disequilibrium map of a human chromosome
14
171217 2003 ARTHRITIS RESEARCH & THERAPY 5(2):51-53
Bell JI
New hope for haplotype mapping
00
181518 2003 BIOINFORMATICS 19(2):287-288
Ke XY; Cardon LR
Efficient selective screening of haplotype tag SNPs
222
1911019 2003 BIOINFORMATICS 19(10):1300-1301
Zhang K; Jin L
HaploBlockFinder: haplotype block analyses
413
2011920 2003 BIOTECHNIQUES 35(4):816-+
Landi S; Gemignani F; Gioia-Patricola L; Chabrier A; Canzian F
Evaluation of a microarray for genotyping polymorphisms related to xenobiotic metabolism and DNA repair
12
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
2155921 2003 COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY 68:55-63
Bentley DR
DNA sequence variation of Homo sapiens
00
2222822 2003 COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY 68:69-78
Fan JB; Oliphant A; Shen R; Kermani BG; Garcia F; et al.
Highly parallel SNP genotyping
02
2365023 2003 COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY 68:79-88
Bertranpetit J; Calafell F; Comas D; Gonzalez-Neira A; Navarro A
Structure of linkage disequilibrium in humans: Genome factors and population stratification
00
2435724 2003 CURRENT OPINION IN GENETICS & DEVELOPMENT 13(3):296-302
Clark AG
Finding genes underlying risk of complex disease by linkage disequilibrium mapping
214
2595425 2003 CURRENT OPINION IN GENETICS & DEVELOPMENT 13(6):569-575
Tishkoff SA; Verrelli BC
Role of evolutionary history on haplotype block structure in the human genome: implications for disease mapping
03
2611926 2003 GENETIC EPIDEMIOLOGY 24(1):57-67
Garner C; Slatkin M
On selecting markers for association studies: Patterns of linkage disequilibrium between two and three diallelic loci
04
2712027 2003 GENETIC EPIDEMIOLOGY 25(2):106-114
Morris A; Pedder A; Ayres K
Linkage disequilibrium assessment via log-linear modeling of SNP haplotype frequencies
01
2833028 2003 GENETICS 165(1):437-444
Innan H; Nordborg M
The extent of linkage disequilibrium and haplotype sharing around a polymorphic site
00
2914829 2003 GENOME BIOLOGY 4(10)
McCarthy MI; Smedley D; Hide W
New methods for finding disease-susceptibility genes: impact and potential
00
3018730 2003 GENOME RESEARCH 13(1):13-26
Hardison RC; Roskin KM; Yang S; Diekhans M; Kent WJ; et al.
Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution
054
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
3124031 2003 GENOME RESEARCH 13(6):1158-1168
Innan H; Padhukasahasram B; Nordborg M
The pattern of polymorphism on human chromosome 21
310
3216732 2003 GENOMICS 82(1):20-33
Cruciani F; Bernardini L; Santolamazza P; Modiano D; Torroni A; et al.
Linkage disequilibrium analysis of the human adenosine deaminase (ADA) gene provides evidence for a lack of correlation between hot spots of equal and unequal homologous recombination
01
3316133 2003 HUMAN GENETICS 113(2):123-139
Webster MT; Clegg JB; Harding RM
Common 5 ' beta-globin RFLP haplotypes harbour a surprising level of ancestral sequence mosaicism
13
3415434 2003 HUMAN GENETICS 113(4):325-336
Mulligan CJ; Robin RW; Osier MV; Sambuughin N; Goldfarb LG; et al.
Allelic variation at alcohol metabolism genes (ADH1B, ADH1C, ALDH2) and alcohol dependence in an American Indian population
05
3552335 2003 HUMAN HEREDITY 56(1-3):48-55
Thompson D; Stram D; Goldgar D; Witte JS
Haplotype tagging single nucleotide polymorphisms and association studies
15
3613736 2003 HUMAN MOLECULAR GENETICS 12(6):647-656
Ahmad T; Neville M; Marshall SE; Armuzzi A; Mulcahy-Hawes K; et al.
Haplotype-specific linkage disequilibrium patterns define the genetic topography of the human MHC
215
372937 2003 JOURNAL OF MOLECULAR MEDICINE-JMM 81(4):215-217
Luft FC
Haplotypes, "hyplotypes", and complex genetic disease
01
3812838 2003 JOURNAL OF NEUROIMMUNOLOGY 143(1-2):70-73
Laaksonen M; Jonasdottir A; Fossdal R; Ruutianen J; Sawcer S; et al.
A whole genome association study in Finnish multiple sclerosis patients with 3669 markers
01
3912139 2003 JOURNAL OF NEUROIMMUNOLOGY 143(1-2):88-92
Jonasdottir A; Thorlacius T; Fossdal R; Jonasdottir A; Benediktsson K; et al.
A whole genome association study in Icelandic multiple sclerosis patients with 4804 markers
01
4013640 2003 MAMMALIAN GENOME 14(8):555-564
Lou XY; Todhunter RJ; Lin M; Lu Q; Liu T; et al.
The extent and distribution of linkage disequilibrium in a multi-hierarchic outbred canine pedigree
11
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
4112541 2003 MAMMALIAN GENOME 14(12):853-858
McKay SD; White SN; Kata SR; Loan R; Womack JE
The bovine 5 ' AMPK gene family: mapping and single nucleotide polymorphism detection
00
4215842 2003 MOLECULAR ECOLOGY 12(5):1225-1235
Lexer C; Welch ME; Durphy JL; Rieseberg LH
Natural selection for salt tolerance quantitative trait loci (QTLs) in wild sunflower hybrids: Implications for the origin of Helianthus paradoxus, a diploid hybrid species
013
431543 2003 NATURE 425(6960):758-759
Dennis C
The rough guide to the genome
04
4416844 2003 NATURE 426(6968):789-796
Gibbs RA; Belmont JW; Hardenbol P; Willis TD; Yu FL; et al.
The International HapMap Project
13106
4513245 2003 NATURE GENETICS 33(3):382-387
Phillips MS; Lawrence R; Sachidanandam R; Morris AP; Balding DJ; et al.
Chromosome-wide distribution of haplotype blocks and the role of recombination hot spots
3682
4669846 2003 NATURE REVIEWS GENETICS 4(8):587-597
Wall JD; Pritchard JK
Haplotype blocks and linkage disequilibrium in the human genome
1670
4711447 2003 NUCLEIC ACIDS RESEARCH 31(1):38-42
Clamp M; Andrews D; Barker D; Bevan P; Cameron G; et al.
Ensembl 2002: accommodating comparative genomics
185
4812748 2003 NUCLEIC ACIDS RESEARCH 31(19)
Brandt O; Feldner J; Stephan A; Schroder M; Schnolzer M; et al.
PNA microarrays for hybridisation of unlabelled DNA samples
04
4915949 2003 PHARMACOGENOMICS 4(2):171-178
Zhao HY; Pfeiffer R; Gail MH
Haplotype analysis in population genetics and association studies
17
50510650 2003 PHARMACOGENOMICS 4(5):547-570
Hoehe MR
Haplotypes and the systematic analysis of genetic variation in genes and genomes
05
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
51110351 2003 TOXICOLOGICAL SCIENCES 75(2):236-248
MacGregor JT
The future of regulatory toxicology: Impact of the biotechnology revolution
01
5212552 2003 TRENDS IN GENETICS 19(3):135-140
Cardon LR; Abecasis GR
Using haplotype blocks to map human complex trait loci
1658
5322553 2003 TWIN RESEARCH 6(5):391-398
Silander K; Axelsson T; Widen E; Dahlgren A; Palotie A; et al.
Analysis of genetic variation in the GenomEUtwin project
00
5413854 2004 AMERICAN JOURNAL OF HUMAN GENETICS 74(3):432-443
Fingerlin TE; Boehnke M; Abecasis GR
Increasing the power and efficiency of disease-marker case-control association studies through use of allele-sharing information
02
5555855 2004 AMERICAN JOURNAL OF HUMAN GENETICS 74(4):610-622
Crawford DC; Carlson CS; Rieder MJ; Carrington DP; Yi Q; et al.
Haplotype diversity across 100 candidate genes for inflammation, lipid metabolism, and blood pressure regulation in two populations
314
5633056 2004 AMERICAN JOURNAL OF HUMAN GENETICS 74(6):1088-1101
Thomas A; Camp NJ
Graphical modeling of the joint distribution of alleles at associated loci
00
5732757 2004 AMERICAN JOURNAL OF HUMAN GENETICS 75(4):687-692
Evans DM; Cardon LR
Guidelines for genotyping in genomewide linkage studies: Single-nucleotide-polymorphism maps versus microsatellite maps
01
5813758 2004 AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS 131B(1):33-37
Lowe N; Kirley A; Mullins C; Fitzgerald M; Gill M; et al.
Multiple marker analysis at the promoter region of the DRD4 gene and ADHD: Evidence of linkage and association with the SNP-616
00
5935259 2004 AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS 131B(1):51-59
McCauley JL; Olson LM; Delahanty R; Amin T; Nurmi EL; et al.
A linkage disequilibrium map of the 1-Mb 15q12 GABA(A) receptor subunit cluster and association to autism
00
6022660 2004 BEHAVIOR GENETICS 34(2):207-214
Sham PC; Rijsdijk FV; Knight J; Makoff A; North B; et al.
Haplotype association analysis of discrete and continuous traits using mixture of regression models
01
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
6151461 2004 BIOINFORMATICS 20(17):3241-3243
Pettersson F; Jonsson O; Cardon LR
GOLDsurfer: three dimensional display of linkage disequilibrium
00
6233762 2004 BIOTECHNIQUES 37(6):977-985
Tebbutt SJ; He JQ; Burkett KM; Ruan J; Opushnyev I; et al.
Microarray genotyping resource to determine population stratification in genetic association studies of complex disease
00
6323263 2004 BMC GENETICS 5
Long JR; Zhao LJ; Liu PY; Lu Y; Dvornyk V; et al.
Patterns of linkage disequilibrium and haplotype distribution in disease candidate genes
00
6461564 2004 CHINESE SCIENCE BULLETIN 49(10):1044-1051
Huang WJ; Li CX; Chen SQ; Sun JD; Zhou Y; et al.
Construction of fine SNP haplotypes and haplotype blocks in 5 genes in the centromere of chromosome 15 in Chinese Han subjects
00
6544665 2004 COMPUTATIONAL METHODS FOR SNPS AND HAPLOTYPE INFERENCE 2983:96-112
Zhang K; Chen T; Waterman MS; Qin ZHS; Liu JS; et al.
Dynamic programming algorithms for haplotype block partitioning and tag SNP selection using haplotype data or genotype data
00
6611666 2004 DEUTSCHE MEDIZINISCHE WOCHENSCHRIFT 129:S25-S28
Metspalu A; Kohler F; Laschinski G; Ganten D; Roots I
The Estonian Genome Project in the context of European Genome Research
01
6715067 2004 DIABETES 53(4):1141-1149
Silander K; Mohlke KL; Scott LJ; Peck EC; Hollstein P; et al.
Genetic variation near the hepatocyte nuclear factor-4 alpha gene predicts susceptibility to type 2 diabetes
012
68110068 2004 EVOLUTION 58(4):870-879
Hansson B; Westerdahl H; Hasselquist D; Akesson M; Bensch S
Does linkage disequilibrium generate heterozygosity-fitness correlations in great reed warblers?
04
69511769 2004 GENES AND IMMUNITY 5(6):461-476
Bernig T; Taylor JG; Foster CB; Staats B; Yeager M; et al.
Sequence analysis of the mannose-binding lectin (MBL2) gene reveals a high degree of heterozygosity with evidence of selection
01
7079470 2004 GENETIC EPIDEMIOLOGY 27(4):321-333
Clark AG
The role of haplotypes in candidate gene studies
02
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
7112571 2004 GENETIC EPIDEMIOLOGY 27(4):385-400
Liu NJ; Sawyer SL; Mukherjee N; Pakstis AJ; Kidd JR; et al.
Haplotype block structures show significant variation among populations
01
7234972 2004 GENETICS 167(4):2067-2081
Fearnhead P; Harding RM; Schneider JA; Myers S; Donnelly P
Application of coalescent mediods to reveal fine-scale rate vairiation and recombination hotspots
00
7322473 2004 GENETICS 168(1):503-511
Tian L; Johnson JA; Casella G; Wu RL
Sequencing complex diseases with HapMap
00
7431974 2004 GENETICS 168(2):1029-1040
Nielsen DM; Ehm MG; Zaykin DV; Weir BS
Effect of two-and three-locus linkage disequilibrium on the power to detect marker/phenotype associations
00
7511575 2004 GENOME BIOLOGY 5(7)
Taylor TD
After 'completion': the changing face of human chromosomes 21 and 22
00
7665476 2004 GENOME RESEARCH 14(5):908-916
Zhang K; Qin ZHS; Liu JS; Chen T; Waterman MS; et al.
Haplotype block partitioning and tag SNP selection using genotype data and their applications to associate studies
08
7722277 2004 GENOME RESEARCH 14(6):1199-1205
Nievergelt CM; Smith DW; Kohlenberg JB; Schork NJ
Large-scale integration of human genetic and physical maps
02
7811778 2004 GENOME RESEARCH 14(7):1358-1361
Greenwood TA; Rana BK; Schork NJ
Human haplotype block sizes are negatively correlated with recombination rates
00
7922579 2004 GENOME RESEARCH 14(7):1404-1412
Fakhrai-Rad H; Zheng JB; Willis TD; Wong K; Suyenaga K; et al.
SNP discovery in pooled samples with mismatch repair detection
00
8024380 2004 GENOME RESEARCH 14(8):1624-1632
Lin S; Chakravarti A; Cutler DJ
Haplotype and missing data inference in nuclear families
01
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
8132781 2004 GENOME RESEARCH 14(8):1664-1668
Nelson MR; Marnellos G; Kammerer S; Hoyal CR; Shi MM; et al.
Large-scale validation of single nucleotide polymorphisms in gene regions
01
8256882 2004 GENOME RESEARCH 14(12):2388-2396
Sutter NB; Eberle MA; Parker HG; Pullar BJ; Kirkness EF; et al.
Extensive and breed-specific linkage disequilibrium in Canis familiaris
00
8353083 2004 GENOMICS 84(6):899-912
Taillon-Miller P; Saccone SF; Saccone NL; Duan S; Kloss EF; et al.
Linkage disequilibrium maps constructed with common SNPs are useful for first-pass disease association screens
00
8414084 2004 GYNECOLOGIC ONCOLOGY 95(1):62-69
Baysal BE; DeLoia JA; Willett-Brozick JE; Goodman MT; Brady MF; et al.
Analysis of CHEK2 gene for ovarian cancer susceptibility
00
8544385 2004 HUMAN GENETICS 114(4):377-385
Stenzel A; Lu T; Koch WA; Hampe J; Guenther SM; et al.
Patterns of linkage disequilibrium in the MHC region on human chromosome 6p
14
8683886 2004 HUMAN MOLECULAR GENETICS 13(3):335-342
Schulze TG; Zhang K; Chen YS; Akula N; Sun FZ; et al.
Defining haplotype blocks and tag single-nucleotide polymorphisms in the human genome
13
87105687 2004 HUMAN MOLECULAR GENETICS 13(6):577-588
Ke XY; Hunt S; Tapper W; Lawrence R; Stavrides G; et al.
The impact of SNP density on fine-scale patterns of linkage disequilibrium
516
8854588 2004 HUMAN MOLECULAR GENETICS 13(15):1623-1632
Tsunoda T; Lathrop GM; Sekine A; Yamada R; Takahashi A; et al.
Variation of gene-based SNPs and linkage disequilibrium patterns in the human genome
00
89811589 2004 JOURNAL OF BIOCHEMISTRY AND MOLECULAR BIOLOGY 37(1):11-27
Elahi E; Kumm J; Ronaghi M
Global genetic analysis
00
9033190 2004 JOURNAL OF HUMAN GENETICS 49(11):603-609
Akesaka T; Lee SG; Ohashi J; Bannai M; Tsuchiya N; et al.
Comparative study of the haplotype structure and linkage disequilibrium of chromosome 1p36.2 region in the Korean and Japanese populations
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
9133591 2004 JOURNAL OF MEDICAL GENETICS 41(4)
Rauch A; Devriendt K; Koch A; Rauch R; Gewillig M; et al.
Assessment of association between variants and haplotypes of the remaining TBX1 gene and manifestations of congenital heart defects in 22q11.2 deletion patients
01
9275992 2004 MOLECULAR PSYCHIATRY 9(3):227-236
van den Oord EJCG; Neale BM
Will haplotype maps be useful for finding genes?
03
9315893 2004 MOVEMENT DISORDERS 19(10):1146-1157
Hedrich K; Eskelson C; Wilmot B; Marder K; Harris J; et al.
Distribution, type, and origin of Parkin mutations: Review and case studies
00
9455694 2004 NATURE REVIEWS GENETICS 5(2):89-U14
Zondervan KT; Cardon LR
The complex interplay among factors that influence allelic association
426
9524695 2004 NATURE REVIEWS GENETICS 5(6):467-475
Foster MW
Integrating ethics and science in the international HapMap project
04
9626596 2004 NATURE REVIEWS GENETICS 5(9):645-656
Roses AD
Pharmacogenetics and drug development: The path to safer and more effective drugs
00
97210197 2004 NATURE REVIEWS GENETICS 5(12):900-910
Sutter NB; Ostrander EA
Dog star rising: The canine genetic system
00
9814498 2004 NEUROGENETICS 5(3):147-155
Oliveira SA; Scott WK; Zhang FY; Stajich JM; Fujiwara K; et al.
Linkage disequilibrium and haplotype tagging polymorphisms in the Tau H1 haplotype
00
991799 2004 PHARMACOGENOMICS JOURNAL 4(2):88-90
Deloukas P; Bentley D
The HapMap project and its application to genetic studies of drug response
01
100425100 2004 PHARMACOGENOMICS JOURNAL 4(6):374-378
Xu CF; Lewis KF; Yeo AJ; McCarthy LC; Maguire MF; et al.
Identification of a pharmacogenetic effect by linkage disequilibrium mapping
00
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
101239101 2004 PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY OF LONDON SERIES B-BIOLOGICAL SCIENCES 359(1441):141-152
Jeffreys AJ; Holloway JK; Kauppi L; May CA; Neumann R; et al.
Meiotic recombination hot spots and human DNA diversity
02
102439102 2004 SCIENCE 304(5670):581-584
McVean GAT; Myers SR; Hunt S; Deloukas P; Bentley DR; et al.
The fine-scale structure of recombination rate variation in the human genome
114
1036100103 2004 TRENDS IN GENETICS 20(4):196-205
Carrington M; Cullen M
Justified chauvinism: advances in defining meiotic recombination through sperm typing
00
104315104 2004 TRENDS IN GENETICS 20(6):268-272
Hammond MP; Birney E
Genome information resources - developments at Ensembl
00

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