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Mon Feb 21 09:56:33 2005
Gene-expression profiles predict survival
of patients with lung adenocarcinoma

Beer DG, Kardia SLR, Huang CC, Giordano TJ, Levin AM, Misek DE, Lin L, Chen GA, Gharib TG, Thomas DG, Lizyness ML, Kuick R, Hayasaka S, Taylor JMG, Iannettoni MD, Orringer MB, Hanash S
NATURE MEDICINE 8 (8): 816-824 AUG 2002
and the citing papers

Nodes: 179, Authors: 1011, Journals: 96, Outer References: 6194, Words: 619
Collection span: 2002 - 2005
View: Overview. Sorted by year, source, volume, issue, page.
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
11381 2002 BIOTECHNIQUES :46-53
Sreekumar A; Chinnaiyan AM
Using protein microarrays to study cancer
02
21452 2002 CLINICAL CANCER RESEARCH 8(12):3803-3812
Moran CJ; Arenberg DA; Huang CC; Giordano TJ; Thomas DG; et al.
RANTES expression is a predictor of survival in stage I lung adenocarcinoma
410
31273 2002 CURRENT OPINION IN MOLECULAR THERAPEUTICS 4(6):587-593
Sreekumar A; Chinnaiyan AM
Protein microarrays: A powerful tool to study cancer
04
41504 2002 NATURE GENETICS 32:533-540
Chung CH; Bernard PS; Perou CM
Molecular portraits and the family tree of cancer
554
50455 2002 NATURE MEDICINE 8(8):816-824
Beer DG; Kardia SLR; Huang CC; Giordano TJ; Levin AM; et al.
Gene-expression profiles predict survival of patients with lung adenocarcinoma
178178
6116 2002 NATURE REVIEWS CANCER 2(8):558-559
Hutchinson E
Profiles of lung cancer
00
71147 2003 AMERICAN JOURNAL OF PATHOLOGY 163(5):1985-1995
Shedden KA; Taylor JMG; Giordano TJ; Kuick R; Misek DE; et al.
Accurate molecular classification of human cancers based on gene expression using a simple classifier with a pathological tree-based framework
12
81588 2003 AMERICAN JOURNAL OF PATHOLOGY 163(6):2383-2395
Linn SC; West RB; Pollack JR; Zhu S; Hernandez-Boussard T; et al.
Gene expression patterns and gene copy number changes in dermatofibrosarcoma protuberans
011
93259 2003 AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY 29(2):153-156
Rom WN; Tchou-Wong KM
Functional genomics in lung cancer and biomarker detection
00
1011510 2003 AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY 29(2):157-162
Powell CA; Spira A; Derti A; DeLisi C; Liu G; et al.
Gene expression in lung adenocarcinomas of smokers and nonsmokers
411
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
1112511 2003 AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY 29(3):S32-S36
Kaminski N
Microarray analysis of idiopathic pulmonary fibrosis
05
1213512 2003 BIOTECHNIQUES :22-+
Scharpf R; Garrett ES; Hu J; Parmigiani G
Statistical modeling and visualization of molecular profiles in cancer
01
1319513 2003 BLOOD 102(2):763-771
Ichiba T; Teshima T; Kuick R; Misek DE; Liu C; et al.
Early changes in gene expression profiles of hepatic GVHD uncovered by oligonucleotide microarrays
07
1413714 2003 BLOOD 102(5):1849-1856
Yagi T; Morimoto A; Eguchi M; Hibi S; Sako M; et al.
Identification of a gene expression signature associated with pediatric AML prognosis
112
1511215 2003 BMC BIOINFORMATICS 4
O'Neill MC; Song L
Neural network analysis of lymphoma microarray data: prognosis and diagnosis near-perfect
03
1611716 2003 BMC GENOMICS 4
McClintick JN; Jerome RE; Nicholson CR; Crabb DW; Edenberg HJ
Reproducibility of oligonucleotide arrays using small samples
08
1715217 2003 CANCER CELL 3(1):9-15
Celis JE; Gromov P
Proteomics in translational cancer research: Toward an integrated approach
221
1814218 2003 CANCER DETECTION AND PREVENTION 27(4):285-290
Zhong L; Peng XJ; Hidalgo GE; Doherty DE; Stromberg AJ; et al.
Antibodies to HSP70 and HSP90 in serum in non-small cell lung cancer patients
00
1922819 2003 CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION 12(9):905-910
Gordon GJ; Richards WG; Sugarbaker DJ; Jaklitsch MT; Bueno R
A prognostic test for adenocarcinoma of the lung from gene expression profiling data
12
2018920 2003 CANCER INVESTIGATION 21(6):937-949
Luo J; Isaacs WB; Trent JM; Duggan DJ
Looking beyond morphology: Cancer gene expression profiling using DNA microarrays
06
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
2111721 2003 CANCER RESEARCH 63(7):1652-1656
Campa MJ; Wang MZ; Howard B; Fitzgerald MC; Patz EF
Protein expression profiling identifies macrophage migration inhibitory factor and cyclophilin A as potential molecular targets in non-small cell lung cancer
113
2217422 2003 CANCER RESEARCH 63(8):1943-1953
Pedersen N; Mortensen S; Sorensen SB; Pedersen MW; Rieneck K; et al.
Transcriptional gene expression profiling of small cell lung cancer cells
29
2315423 2003 CANCER RESEARCH 63(14):4136-4143
Miller CT; Aggarwal S; Lin TK; Dagenais SL; Contreras JI; et al.
Amplification and overexpression of the dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 (DYRK2) gene in esophageal and lung adenocarcinomas
04
2414724 2003 CANCER RESEARCH 63(17):5243-5250
Nishizuka S; Chen ST; Gwadry FG; Alexander J; Major SM; et al.
Diagnostic markers that distinguish colon and ovarian adenocarcinomas: identification by genomic, proteomic, and tissue array profiling
422
2514625 2003 CARCINOGENESIS 24(11):1819-1826
Gariboldi M; Spinola M; Milani S; Pignatiello C; Kadota K; et al.
Gene expression profile of normal lungs predicts genetic predisposition to lung cancer in mice
00
2614226 2003 CLINICAL CANCER RESEARCH 9(7):2605-2612
Hung TL; Chen FF; Liu JM; Lai WW; Hsiao AL; et al.
Clinical evaluation of HER-2/neu protein in malignant pleural effusion-associated lung adenocarcinoma and as a tumor marker in pleural effusion diagnosis
01
2712527 2003 CLINICAL CANCER RESEARCH 9(13):4695-4704
Yamagata N; Shyr Y; Yanagisawa K; Edgerton M; Dang TP; et al.
A training-testing approach to the molecular classification of resected non-small cell lung cancer
25
2812828 2003 CLINICAL CANCER RESEARCH 9(15):5486-5492
Wong YF; Selvanayagam ZE; Wei N; Porter J; Vittal R; et al.
Expression Genomics of cervical cancer: Molecular classification and prediction of radiotherapy response by DNA microarray
14
2914229 2003 CLINICAL CANCER RESEARCH 9(16):5980-5987
Lim EH; Aggarwal A; Agasthian T; Wong PS; Tan C; et al.
Feasibility of using low-volume tissue samples for gene expression profiling of advanced non-small cell lung cancers
34
30118130 2003 CURRENT MEDICINAL CHEMISTRY 10(8):691-706
Goessl C
Noninvasive molecular detection of cancer - the bench and the bedside
06
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
3113731 2003 CURRENT OPINION IN CELL BIOLOGY 15(2):213-220
Ciro M; Bracken AP; Helin K
Profiling cancer
13
3214132 2003 DRUG DISCOVERY TODAY 8(8):356-363
Huang Y; Sadee W
Drug sensitivity and resistance genes in cancer chemotherapy: a chemogenomics approach
17
3324833 2003 ENDOCRINE PATHOLOGY 14(2):107-116
Giordano TJ
Gene expression profiling of endocrine tumors using DNA microarrays: Progress and promise
01
3411234 2003 EUROPEAN RESPIRATORY JOURNAL 21(4):565-566
Field JK; Brambilla C
Major conceptual change required to improve lung cancer: see a respiratory physician
02
3517835 2003 EXPERT REVIEW OF MOLECULAR DIAGNOSTICS 3(1):55-67
Valle RPC; Chavany C; Zhukov TA; Jendoubi M
New approaches for biomarker discovery in lung cancer
04
3618436 2003 EXPERT REVIEW OF MOLECULAR DIAGNOSTICS 3(2):185-200
Macgregor PF
Gene expression in cancer: the application of microarrays
06
3718637 2003 EXPERT REVIEW OF MOLECULAR DIAGNOSTICS 3(5):635-647
Dyrskjot L
Classification of bladder cancer by microarray expression profiling: towards a general clinical use of microarrays in cancer diagnostics
03
3811138 2003 FEBS LETTERS 540(1-3):167-170
Creighton C; Hanash S; Beer D
Gene expression patterns define pathways correlated with loss of differentiation in lung adenocarcinomas
23
3913239 2003 GENOME BIOLOGY 4(3)
Muro S; Takemasa I; Oba S; Matoba R; Ueno N; et al.
Identification of expressed genes linked to malignancy of human colorectal carcinoma by parametric clustering of quantitative expression data
08
4022240 2003 GENOME BIOLOGY 4(7)
Creighton C; Kuick R; Misek DE; Rickman DS; Brichory FM; et al.
Profiling of pathway-specific changes in gene expression following growth of human cancer cell lines transplanted into mice
02
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
4114641 2003 HEMATOLOGY-ONCOLOGY CLINICS OF NORTH AMERICA 17(2):377-+
Mariadason JM; Augenlicht LH; Arango D
Microarray analysis in the clinical management of cancer
02
4215042 2003 HYPERTENSION 41(1):3-8
Pravenec M; Wallace C; Aitman TJ; Kurtz TW
Gene expression profiling in hypertension research - A critical perspective
07
4312143 2003 INTERNATIONAL JOURNAL OF CANCER 107(2):238-243
Player A; Gillespie J; Fujii T; Fukuoka J; Dracheva T; et al.
Identification of TDE2 gene and its expression in non-small cell lung cancer
03
4413444 2003 JOURNAL OF CLINICAL ONCOLOGY 21(14):2651-2657
Weber WA; Petersen V; Schmidt B; Tyndale-Hines L; Link T; et al.
Positron emission tomography in non-small-cell lung cancer: Prediction of response to chemotherapy by quantitative assessment of glucose use
017
4523345 2003 JOURNAL OF PEDIATRICS 142(3):235-239
Bates MD
The potential of DNA microarrays for the care of children
00
4612546 2003 JOURNAL OF THE NATIONAL CANCER INSTITUTE 95(8):598-605
Gordon GJ; Jensen RV; Hsiao LL; Gullans SR; Blumenstock JE; et al.
Using gene expression ratios to predict outcome among patients with mesothelioma
214
4713447 2003 JOURNAL OF THE NATIONAL CANCER INSTITUTE 95(18):1362-1369
Dobbin K; Shih JH; Simon R
Questions and answers on design of dual-label microarrays for identifying differentially expressed genes
08
4813148 2003 KLINISCHE PADIATRIE 215(3):135-138
Staege MS; Hattenhorst UE; Neumann I; Hutter C; Foja S; et al.
DNA-microarrays as tools for the Identification of tumor specific gene expression profiles: Applications in tumor biology, diagnosis and therapy
03
4916949 2003 LABORATORY INVESTIGATION 83(3):305-316
Bertucci F; Viens P; Tagett R; Nguyen C; Houlgatte R; et al.
DNA arrays in clinical oncology: Promises and challenges
011
5013350 2003 LANCET 362(9382):433-439
Yanagisawa K; Shyr Y; Xu BGJ; Massion PP; Larsen PH; et al.
Proteomic patterns of tumour subsets in non-small-cell lung cancer
844
#LCRNCRNodes / Date / Journal / AuthorsLCSGCS
5118551 2003 LANCET ONCOLOGY 4(3):177-185
Lonning PE
Study of suboptimum treatment response: lessons from breast cancer
16
5214452 2003 LANGENBECKS ARCHIVES OF SURGERY 388(2):77-82
Hosch SB; Stoecklein NH; Izbicki JR
Molecular markers and staging of early esophageal cancer
00
53111053 2003 LUNG CANCER 40(2):111-121
Sanchez-Cespedes M
Dissecting the genetic alterations involved in lung carcinogenesis
14
5414554 2003 MOLECULAR & CELLULAR PROTEOMICS 2(2):107-116
Chen G; Wang H; Gharib TG; Huang CC; Thomas DG; et al.
Overexpression of oncoprotein 18 correlates with poor differentiation in lung adenocarcinomas
17
5514155 2003 NEUROTOXICOLOGY 24(3):321-332
Vrana KE; Freeman WM; Aschner M
Use of microarray technologies in toxicology research
08
5614656 2003 NEW TRENDS IN CANCER FOR THE 21ST CENTURY 532:51-58
Madoz-Gurpide J; Hanash SM
Molecular analysis of cancer using DNA and protein microarrays
02
5713357 2003 ONCOGENE 22(14):2192-2205
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Expression profiles of non-small cell lung cancers on cDNA microarrays: Identification of genes for prediction of lymph-node metastasis and sensitivity to anti-cancer drugs
1137
5813758 2003 ONCOGENE 22(39):7950-7957
Miller CT; Chen G; Gharib TG; Wang H; Thomas DG; et al.
Increased C-CRK proto-oncogene expression is associated with an aggressive phenotype in lung adenocarcinomas
03
59112359 2003 ONCOGENE 22(42):6497-6507
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Advantages and limitations of microarray technology in human cancer
215
6014460 2003 ONCOGENE 22(51):8246-8254
Kartasheva NN; Lenz-Bauer C; Hartmann O; Schafer H; Eilers M; et al.
Delta Np73 can modulate the expression of various genes in a p53-independent fashion
01
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6113261 2003 ONCOLOGIST 8(3):252-258
Pusztai L; Ayers M; Stec J; Hortobagyi GN
Clinical application of cDNA microarrays in oncology
19
6212062 2003 PHYSICAL REVIEW LETTERS 90(15)
Agrawal H; Domany E
Potts ferromagnets on coexpressed gene networks: Identifying maximally stable partitions
02
6312763 2003 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100(14):8418-8423
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Repeated observation of breast tumor subtypes in independent gene expression data sets
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Protein profiles associated with survival in lung adenocarcinoma
512
6522965 2003 PROTEOMICS 3(4):496-504
Chen G; Gharib TG; Thomas DG; Huang CC; Misek DE; et al.
Proteomic analysis of eIF-5A in lung adenocarcinomas
05
66212666 2003 RESPIRATORY RESEARCH 4(12)
Massion PP; Carbone DP
The molecular basis of lung cancer: molecular abnormalities and therapeutic implications
01
671967 2003 SCIENTIST :22-24
Lewis R
DNA expression profiling: A new lens on cancer - The seeds of spread may be sown early
00
6813468 2003 SWISS MEDICAL WEEKLY 133(3-4):31-38
Joos L; Eryuksel E; Brutsche MH
Functional genomics and gene microarrays - the use in research and clinical medicine
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6914669 2003 TRENDS IN CARDIOVASCULAR MEDICINE 13(4):163-168
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7044670 2004 AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE 170(2):167-174
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7144671 2004 AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY 31(2):S39-S44
[Anon]
Expression analysis in lung cancer - The search for biomarkers
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[Anon]
Identifying regulatory networks - Lessons from yeast to humans
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