Cited nodes | Nodes / Authors | GCS | LCS |
| 3 | 1 1999 BIOPOLYMERS 52(3):147-154
Eckstein F; Bramlage B The hammerhead ribozyme | 3 | 0
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| 1 | 2 1999 BIOPOLYMERS 52(4):157-167
Schroeder SJ; Burkard ME; Turner DH The energetics of small internal loops in RNA | 1 | 0
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| 1 | 3 2000 ANATOMICAL RECORD 261(5):198-215
Schutt CE; Lindberg U The new architectonics: An invitation to structural biology | 0 | 0
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| 1 | 4 2000 CELL 103(7):1143-1154
Brodersen DE; Clemons WM; Carter AP; Morgan-Warren RJ; Wimberly BT; Ramakrishnan V The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit | 38 | 22
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| 1 | 5 2000 CHEMBIOCHEM 1(4):250-253
Connell SR; Nierhaus KH Translational termination not yet at its end | 0 | 0
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| 2 | 6 2000 CURRENT OPINION IN CHEMICAL BIOLOGY 4(6):609-618
Niemeyer CM Self-assembled nanostructures based on DNA: towards the development of nanobiotechnology | 15 | 2
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| 1 | 7 2000 CURRENT OPINION IN STRUCTURAL BIOLOGY 10(6):631-632
Isaacs NV Proteins - Where is the information in structural space? | 0 | 0
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| 1 | 8 2000 CURRENT OPINION IN STRUCTURAL BIOLOGY 10(6):633-636
Sanyal SC; Liljas A The end of the beginning: structural studies of ribosomal proteins | 4 | 4
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| 2 | 9 2000 IUBMB LIFE 50(6):347-354
Moreno JMP; Sorensen HP; Mortensen KK; Sperling-Petersen HU Macromolecular mimicry in translation initiation: A model for the initiation factor IF2 on the ribosome | 2 | 0
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| 1 | 10 2000 JOURNAL OF CELL BIOLOGY 151(5):F23-F26
Aitchison JD; Rout MP The road to ribosomes: Filling potholes in the export pathway | 4 | 1
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| 1 | 11 2000 JOURNAL OF MOLECULAR BIOLOGY 304(3):335-354
Gutell RR; Cannone JJ; Shang Z; Du Y; Serra MJ A story: Unpaired adenosine bases in ribosomal RNAs | 13 | 8
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| 1 | 12 2000 JOURNAL OF MOLECULAR BIOLOGY 304(3):371-383
van Buuren BNM; Overmars FJJ; Ippel JH; Altona C; Wijmenga SS Solution structure of a DNA three-way junction containing two unpaired thymidine bases. Identification of sequence features that decide conformer selection | 6 | 0
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| 3 | 13 2000 JOURNAL OF MOLECULAR BIOLOGY 304(3):471-481
Poulsen SM; Kofoed C; Vester B Inhibition of the ribosomal peptidyl transferase reaction by the mycarose moiety of the antibiotics carbomycin, spiramycin and tylosin | 9 | 7
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| 1 | 14 2000 JOURNAL OF MOLECULAR BIOLOGY 304(4):507-515
VanLoock MS; Agrawal RK; Gabashvili IS; Qi L; Frank J; Harvey SC Movement of the decoding region of the 16 S ribosomal RNA accompanies tRNA translocation | 20 | 12
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| 4 | 15 2000 NATURE 407(6802):306-307
Williamson JR Molecular biology - Small subunit, big science | 3 | 2
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| 2 | 16 2000 NATURE STRUCTURAL BIOLOGY 7(10):817-818
[Anon] RNA-protein machines rule | 0 | 0
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| 3 | 17 2000 NATURE STRUCTURAL BIOLOGY 7(10):850-854
Collins CA; Guthrie C The question remains: Is the spliceosome a ribozyme? | 37 | 6
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| 3 | 18 2000 NATURE STRUCTURAL BIOLOGY 7(10):855-861
Puglisi JD; Blanchard SC; Green R Approaching translation at atomic resolution | 14 | 7
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| 1 | 19 2000 NATURE STRUCTURAL BIOLOGY 7():928-930
Russell RB; Eggleston DS New roles for structure in biology and drug discovery - Foreword | 8 | 0
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| 1 | 20 2000 NATURE STRUCTURAL BIOLOGY 7():954-956
Doudna JA Structural genomics of RNA | 6 | 2
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| 3 | 21 2000 SCIENCE 289(5481):878-879
Cech TR Structural biology - The ribosome is a ribozyme | 22 | 10
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| 1 | 22 2000 SCIENCE 289(5481):905-920
Ban N; Nissen P; Hansen J; Moore PB; Steitz TA The complete atomic structure of the large ribosomal subunit at 2.4 angstrom resolution | 402 | 402
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| 2 | 23 2000 SCIENCE 289(5481):920-930
Nissen P; Hansen J; Ban N; Moore PB; Steitz TA The structural basis of ribosome activity in peptide bond synthesis | 257 | 155
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| 2 | 24 2000 SCIENCE 289(5481):947-950
Muth GW; Ortoleva-Donnelly L; Strobel SA A single adenosine with a neutral pK(a) in the ribosomal peptidyl transferase center | 83 | 51
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| 3 | 25 2000 SCIENCE 290(5499):2095-2096
Breaker RR Molecular biology - Making catalytic DNAs | 7 | 1
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| 2 | 26 2000 STRUCTURE 8(10):R195-R200
Brimacombe R The bacterial ribosome at atomic resolution | 5 | 5
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| 2 | 27 2000 TRENDS IN BIOCHEMICAL SCIENCES 25(10):485-485
Brenner C Condensing the RNA world | 0 | 0
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| 1 | 28 2000 TRENDS IN BIOCHEMICAL SCIENCES 25(12):611-618
Radford SE Protein folding: progress made and promises ahead | 20 | 0
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| 1 | 29 2000 TRENDS IN BIOCHEMICAL SCIENCES 25(12):624-631
Baumeister W; Steven AC Macromolecular electron microscopy in the era of structural genomics | 16 | 0
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| 1 | 30 2000 TRENDS IN BIOCHEMICAL SCIENCES 25(12):637-643
Hendrickson WA Synchrotron crystallography | 10 | 2
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| 1 | 31 2001 ACCOUNTS OF CHEMICAL RESEARCH 34(10):836-843
Gallego J; Varani G Targeting RNA with small-molecule drugs: Therapeutic promise and chemical challenges | 7 | 1
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| 2 | 32 2001 ACTA BIOCHIMICA POLONICA 48(1):191-198
Barciszewska MZ; Szymanski M; Erdmann VA; Barciszewski J Structure and functions of 5S rRNA | 1 | 1
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| 2 | 33 2001 ACTA BIOCHIMICA POLONICA 48(2):409-418
Ciesiolka J; Wrzesinski J; Legiewicz M; Smolska B; Dutkiewicz M Ribozymes of the hepatitis delta virus: Recent findings on their structure, mechanism of catalysis and possible applications | 0 | 0
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| 1 | 34 2001 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 57():219-224
Perbandt M; Vallazza M; Lippmann C; Betzel C; Erdmann VA Structure of an RNA duplex with an unusual G center dot C pair in wobble-like conformation at 1.6 angstrom resolution | 2 | 1
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| 1 | 35 2001 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 57():865-866
Wong KB; Wang WK; Proctor MR; Bycroft M; Chen YW Crystallization and preliminary crystallographic studies of a ribosomal protein L30e from the hyperthermophilic archaeon Thermococcus celer | 1 | 0
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| 1 | 36 2001 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 57():968-976
Fedorov R; Meshcheryakov V; Gongadze G; Fomenkova N; Nevskaya N; Selmer M; Laurberg M; Kristensen O; Al-Karadaghi S; Liljas A; Garber M; Nikonov S Structure of ribosomal protein TL5 complexed with RNA provides new insights into the CTC family of stress proteins | 3 | 2
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| 1 | 37 2001 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 57():1150-1152
Davydova N; Fedorov R; Streltsov V; Liljas A; Garber M Crystals of a mutant form of ribosomal protein L22 rendering bacterial ribosomes resistant to erythromycin | 1 | 1
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| 4 | 38 2001 ANGEWANDTE CHEMIE-INTERNATIONAL EDITION 40(22):4128-4158
Niemeyer CM Nanoparticles, proteins, and nucleic acids: Biotechnology meets materials science | 29 | 0
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| 2 | 39 2001 ANNUAL REVIEW OF BIOCHEMISTRY 70():603-647
Frydman J Folding of newly translated proteins in vivo: The role of molecular chaperones | 34 | 2
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| 2 | 40 2001 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 45(10):2877-2884
Springer B; Kidan YG; Prammananan T; Ellrott K; Bottger EC; Sander P Mechanisms of streptomycin resistance: Selection of mutations in the 16S rRNA gene conferring resistance | 2 | 1
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| 1 | 41 2001 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 45(11):3046-3055
Wilcox SK; Cavey GS; Pearson JD Single ribosomal protein mutations in antibiotic-resistant bacteria analyzed by mass spectrometry | 1 | 0
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| 1 | 42 2001 APPLIED AND ENVIRONMENTAL MICROBIOLOGY 67(2):961-968
Fuchs BM; Syutsubo K; Ludwig W; Amann R In situ accessibility of Escherichia coli 23S rRNA to fluorescently labeled oligonucleotide probes | 4 | 0
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| 1 | 43 2001 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 280(2):460-465
Fisher LW; Torchia DA; Fohr B; Young MF; Fedarko NS Flexible structures of SIBLING proteins, bone sialoprotein, and osteopontin | 11 | 0
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| 1 | 44 2001 BIOCHEMISTRY 40(8):2387-2396
Yoshida T; Uchiyama S; Nakano H; Kashimori H; Kijima H; Ohshima T; Saihara Y; Ishino T; Shimahara H; Yoshida T; Yokose K; Ohkubo T; Kaji A; Kobayashi Y Solution structure of the ribosome recycling factor from Aquifex aeolicus | 9 | 3
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| 1 | 45 2001 BIOCHEMISTRY 40(10):3222-3231
Larsson SL; Nygard O Proposed secondary structure of eukaryote specific expansion segment 15 in 28S rRNA from mice, rats, and rabbits | 2 | 1
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| 4 | 46 2001 BIOCHEMISTRY 40(11):3243-3250
Moore PB The ribosome at atomic resolution | 6 | 1
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| 3 | 47 2001 BIOCHEMISTRY 40(25):7641-7650
Amarantos I; Xaplanteri MA; Choli-Papadopoulou T; Kalpaxis DL Effects of two photoreactive spermine analogues on peptide bond formation and their application for labeling proteins in Escherichia coli functional ribosomal complexes | 1 | 0
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| 1 | 48 2001 BIOCHEMISTRY 40(31):9104-9114
Rajamohan F; Ozer Z; Mao C; Uckun FM Active center cleft residues of pokeweed antiviral protein mediate its high-affinity binding to the ribosomal protein L3 | 0 | 0
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| 1 | 49 2001 BIOCHEMISTRY 40(32):9587-9595
Zwieb C; Guven SA; Wower IK; Wower J Three-dimensional folding of the tRNA-like domain of Escherichia coli tmRNA | 7 | 1
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| 1 | 50 2001 BIOCHEMISTRY 40(33):9879-9886
Zhang H; Fountain MA; Krugh TR Structural characterization of a six-nucleotide RNA hairpin loop found in Escherichia coli, r(UUAAGU) | 0 | 0
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| 1 | 51 2001 BIOCHEMISTRY 40(38):11509-11517
Schroeder SJ; Turner DH Thermodynamic stabilities of internal loops with GU closing pairs in RNA | 0 | 0
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| 3 | 52 2001 BIOCHEMISTRY 40(39):11777-11784
Lavrik IN; Avdeeva ON; Dontsova OA; Froeyen M; Herdewijn PA Translational properties of mHNA, a messenger RNA containing anhydrohexitol nucleotides | 2 | 0
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| 3 | 53 2001 BIOCHEMISTRY 40(42):12645-12653
DiNitto JP; Huber PW A role for aromatic amino acids in the binding of Xenopus ribosomal protein L5 to 5S rRNA | 0 | 0
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| 2 | 54 2001 BIOCHEMISTRY-MOSCOW 66(10):1144-1152
Hofmann E What can medicine learn from the human DNA sequence? | 0 | 0
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| 1 | 55 2001 BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1520(1):7-20
Willumeit R; Diedrich G; Forthmann S; Beckmann J; May RP; Stuhrmann HB; Nierhaus KH Mapping proteins of the 50S subunit from Escherichia coli ribosomes | 1 | 1
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| 3 | 56 2001 BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1521(1-3):30-38
Sloma MS; Nygard O Possible interaction sites of mRNA, tRNA, translation factors and the nascent peptide in 5S, 5.8S and 28S rRNA in in vivo assembled eukaryotic ribosomal complexes | 1 | 1
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| 7 | 57 2001 BIOESSAYS 23(8):725-732
Frank J Cryo-electron microscopy as an investigative tool: the ribosome as an example | 5 | 2
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| 1 | 58 2001 BIOFUTUR 2001(207):42-45
Douthwaite S; Fourmy D Deep in the ribosome | 0 | 0
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| 6 | 59 2001 BIOPOLYMERS 61(1):32-51
Suhnel J Beyond nucleic acid base pairs: From triads to heptads | 0 | 0
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| 1 | 60 2001 CANADIAN JOURNAL OF ZOOLOGY-REVUE CANADIENNE DE ZOOLOGIE 79(2):334-345
Armbruster GFJ Temperature-based variation of rRNA secondary structure models: a case study in the insect Drosophila simulans, the land snail Isabellaria adriani, and the crustacean Daphnia pulex | 0 | 0
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| 5 | 61 2001 CELL 104(6):813-816
Maguire BA; Zimmermann RA The ribosome in focus | 4 | 0
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| 1 | 62 2001 CELL 106(6):723-733
Park HS; Himmelbach A; Browning KS; Hohn T; Ryabova LA A plant viral "reinitiation" factor interacts with the host translational machinery | 4 | 1
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| 4 | 63 2001 CELL 107(3):361-372
Beckmann R; Spahn CMT; Eswar N; Helmers J; Penczek PA; Sali A; Frank J; Blobel G Architecture of the protein-conducting channel associated with the translating 80S ribosome | 19 | 4
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| 7 | 64 2001 CELL 107(3):373-386
Spahn CMT; Beckmann R; Eswar N; Penczek PA; Sali A; Blobel G; Frank J Structure of the 80S ribosome from Saccharomyces cerevisiae - tRNA-ribosome and subunit-subunit interactions | 16 | 7
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| 12 | 65 2001 CELL 107(5):679-688
Harms J; Schluenzen F; Zarivach R; Bashan A; Gat S; Agmon I; Bartels H; Franceschi F; Yonath A High resolution structure of the large ribosomal subunit from a mesophilic Eubacterium | 23 | 21
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| 1 | 66 2001 CELLULAR AND MOLECULAR LIFE SCIENCES 58(2):234-243
Holbrook SR; Holbrook EL; Walukiewicz HE Crystallization of RNA | 1 | 0
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| 3 | 67 2001 CHEMBIOCHEM 2(1):31-35
Lilley DMJ The ribosome functions as a ribozyme | 2 | 1
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| 3 | 68 2001 CHEMISTRY-A EUROPEAN JOURNAL 7(15):3189-3195
Niemeyer CM Bioorganic applications of semisynthetic DNA-protein conjugates | 1 | 0
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| 2 | 69 2001 CHIMIA 55(6):487-492
Richmond TJ The structural basis of gene regulation for DNA organized as chromatin | 0 | 0
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| 2 | 70 2001 CLINICAL MICROBIOLOGY AND INFECTION 7():11-17
Douthwaite S Structure-activity relationships of ketolides vs. macrolides | 2 | 0
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| 3 | 71 2001 CROATICA CHEMICA ACTA 74(1):1-35
Kojic-Prodic B; Kroon J (Bio)crystallography at the turn of the millennium | 0 | 0
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| 4 | 72 2001 CURRENT OPINION IN NEUROBIOLOGY 11(5):594-600
McEwen BF; Frank J Electron tomographic and other approaches for imaging molecular machines | 6 | 1
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| 1 | 73 2001 CURRENT OPINION IN STRUCTURAL BIOLOGY 11(1):39-46
Laity JH; Lee BM; Wright PE Zinc finger proteins: new insights into structural and functional diversity | 26 | 1
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| 3 | 74 2001 CURRENT OPINION IN STRUCTURAL BIOLOGY 11(1):107-113
Bamford DH; Gilbert RJC; Grimes JM; Stuart DI Macromolecular assemblies: greater than their parts | 2 | 0
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| 4 | 75 2001 CURRENT OPINION IN STRUCTURAL BIOLOGY 11(2):144-154
Ramakrishnan V; Moore PB Atomic structures at last: the ribosome in 2000 | 25 | 13
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| 2 | 76 2001 CURRENT OPINION IN STRUCTURAL BIOLOGY 11(3):282-286
Major F; Griffey R Computational methods for RNA structure determination | 1 | 1
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| 1 | 77 2001 CURRENT OPINION IN STRUCTURAL BIOLOGY 11(3):309-314
Treiber DK; Williamson JR Beyond kinetic traps in RNA folding | 17 | 8
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| 1 | 78 2001 EMBO JOURNAL 20(6):1415-1424
Lafontaine DA; Norman DG; Lilley DMJ Structure, folding and activity of the VS ribozyme: importance of the 2-3-6 helical junction | 10 | 2
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| 4 | 79 2001 EMBO JOURNAL 20(8):1829-1839
Pioletti M; Schlunzen F; Harms J; Zarivach R; Gluhmann M; Avila H; Bashan A; Bartels H; Auerbach T; Jacobi C; Hartsch T; Yonath A; Franceschi F Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3 | 31 | 22
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| 1 | 80 2001 EMBO JOURNAL 20(8):2051-2061
Swisher J; Duarte DM; Su LJ; Pyle AM Visualizing the solvent-inaccessible core of a group II intron ribozyme | 8 | 2
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| 2 | 81 2001 EMBO JOURNAL 20(13):3577-3586
McConnell TS; Steitz JA Proximity of the invariant loop of U5 snRNA to the second intron residue during pre-mRNA splicing | 2 | 0
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| 2 | 82 2001 EMBO JOURNAL 20(15):4214-4221
Klein DJ; Schmeing TM; Moore PB; Steitz TA The kink-turn: a new RNA secondary structure motif | 17 | 12
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| 4 | 83 2001 EMBO JOURNAL 20(22):6434-6442
Pinard R; Hampel KJ; Heckman JE; Lambert D; Chan PA; Major F; Burke JM Functional involvement of G8 in the hairpin ribozyme cleavage mechanism | 6 | 0
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| 1 | 84 2001 GENOME RESEARCH 11(10):1641-1650
Kennedy SP; Ng WV; Salzberg SL; Hood L; DasSarma S Understanding the adaptation of Halobacterium species NRC-1 to its extreme environment through computational analysis of its genome sequence | 5 | 0
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| 2 | 85 2001 HELICOBACTER 6(2):100-109
Monstein HJ; de la Cour CD; Jonasson J Probing 23S ribosomal RNA cleavage sites in coccoid Helicobacter pylori | 0 | 0
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| 1 | 86 2001 INTERNATIONAL JOURNAL FOR PARASITOLOGY 31(5-6):427-433
Cross GAM African trypanosomes in the 21st century: what is their future in science and in health? | 0 | 0
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| 2 | 87 2001 INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY 33(6):541-553
Kramer G; Ramachandiran V; Hardesty B Cotranslational folding - omnia mea mecum porto? | 2 | 1
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| 2 | 88 2001 JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY 48():1-8
Douthwaite S; Champney WS Structures of ketolides and macrolides determine their mode of interaction with the ribosomal target site | 5 | 3
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| 1 | 89 2001 JOURNAL OF BACTERIOLOGY 183(14):4382-4385
Gregory ST; Cate JHD; Dahlberg AE Spontaneous erythromycin resistance mutation in a 23S rRNA gene, rrlA, of the extreme thermophile Thermus thermophilus IB- 21 | 0 | 0
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| 1 | 90 2001 JOURNAL OF BACTERIOLOGY 183(22):6532-6537
Yang XM; Ishiguro EE Involvement of the N terminus of ribosomal protein L11 in regulation of the RelA protein of Escherichia coli | 0 | 0
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| 3 | 91 2001 JOURNAL OF BACTERIOLOGY 183(22):6565-6572
Maguire BA; Manuilov AV; Zimmermann RA Differential effects of replacing Escherichia coli ribosomal protein L27 with its homologue from Aquifex aeolicus | 0 | 0
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| 5 | 92 2001 JOURNAL OF BACTERIOLOGY 183(23):6898-6907
Garza-Ramos G; Xiong LQ; Zhong P; Mankin A Binding site of macrolide antibiotics on the ribosome: New resistance mutation identifies a specific interaction of ketolides with rRNA | 3 | 0
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| 3 | 93 2001 JOURNAL OF BIOCHEMISTRY 129(6):851-860
Sato T; Terabe M; Watanabe H; Gojobori T; Hori-Takemoto C; Miura K Codon and base biases after the initiation codon of the open reading frames in the Escherichia coli genome and their influence on the translation efficiency | 0 | 0
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| 2 | 94 2001 JOURNAL OF BIOCHEMISTRY 130(5):695-701
Hosaka H; Yao M; Kimura M; Tanaka I The structure of the archaebacterial ribosomal protein S7 and its possible interaction with 16S rRNA | 0 | 0
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| 2 | 95 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(3):1974-1983
Gong F; Yanofsky C Reproducing tna operon regulation in vitro in an S-30 system - Tryptophan induction inhibits cleavage of TnaC peptidyl-RNA? | 6 | 2
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| 1 | 96 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(10):7415-7421
Gaspar LP; Terezan AF; Pinheiro AS; Foguel D; Rebello MA; Silva JL The metastable state of nucleocapsids of enveloped viruses as probed by high hydrostatic pressure | 6 | 0
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| 1 | 97 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(17):14117-14123
Montesano-Roditis L; Glitz DG; Traut RR; Stewart PL Cryo-electron microscopic localization of protein L7/L12 within the Escherichia coli 70 S ribosome by difference mapping and Nanogold labeling | 2 | 0
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| 1 | 98 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(23):19762-19769
Gonzalo P; Lavergne JP; Reboud JP Pivotal role of the P1N-terminal domain in the assembly of the mammalian ribosomal stalk and in the proteosynthetic activity | 5 | 4
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| 3 | 99 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(24):21724-21736
Suzuki T; Terasaki M; Takemoto-Hori C; Hanada T; Ueda T; Wada A; Watanabe K Structural compensation for the deficit of rRNA with proteins in the mammalian mitochondrial ribosome - Systematic analysis of protein components of the large ribosomal subunit from mammalian mitochondria | 9 | 3
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| 1 | 100 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(26):24075-24081
Rajamohan F; Mao C; Uckun FM Binding interactions between the active center cleft of recombinant pokeweed antiviral protein and the alpha- sarcin/ricin stem loop of ribosomal RNA | 0 | 0
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Cited nodes | Nodes / Authors | GCS | LCS |
| 2 | 101 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(27):25411-25420
Clark PL; King J A newly synthesized, ribosome-bound polypeptide chain adopts conformations dissimilar from early in vitro refolding intermediates | 5 | 1
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| 1 | 102 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(35):32474-32479
Guarinos E; Remacha M; Ballesta JPG Asymmetric interactions between the acidic P1 and P2 proteins in the Saccharomyces cerevisiae ribosomal stalk | 1 | 0
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| 4 | 103 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(35):33181-33195
Suzuki T; Terasaki M; Takemoto-Hori C; Hanada T; Ueda T; Wada A; Watanabe K Proteomic analysis of the mammalian mitochondrial ribosome - Identification of protein components in the 28 S small subunit | 10 | 1
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| 1 | 104 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(36):33821-33825
Yu X; Warner JR Expression of a micro-protein | 1 | 0
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| 1 | 105 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(40):37199-37205
Patel U; Yan YP; Hobbs FW; Kaczmarczyk J; Slee AM; Pompliano DL; Kurilla MG; Bobkova EV Oxazolidinones mechanism of action: Inhibition of the first peptide bond formation | 1 | 1
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| 4 | 106 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(47):43958-43969
Koc EC; Burkhart W; Blackburn K; Moyer MB; Schlatzer DM; Moseley A; Spremulli LL The large subunit of the mammalian mitochondrial ribosome - Analysis of the complement of ribosomal proteins present | 5 | 1
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| 1 | 107 2001 JOURNAL OF BIOLOGICAL CHEMISTRY 276(50):47702-47708
Zvereva MI; Ivanov PV; Teraoka Y; Topilina NI; Dontsova OA; Bogdanov AA; Kalkum M; Nierhaus KH; Shpanchenko OV Complex of transfer-messenger RNA and elongation factor Tu - Unexpected modes of interaction | 3 | 1
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| 1 | 108 2001 JOURNAL OF BIOMOLECULAR NMR 20(3):293-294
Markus MA; Triantafillidou D; Choli-Papadopoulou T; Torchia DA Letter to the Editor: H-1, N-15, and C-13 assignments and secondary structure identification for full-length ribosomal protein L11 from Thermus thermophilus | 0 | 0
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| 1 | 109 2001 JOURNAL OF BIOMOLECULAR NMR 20(4):311-323
Warren JJ; Moore PB Application of dipolar coupling data to the refinement of the solution structure of the Sarcin-Ricin loop RNA | 2 | 0
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| 1 | 110 2001 JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS 18(6):824-831
Vasudevan SS; Sundaralingam M The occurrence of the syn-C3' endo conformation and the distorted backbone conformations for C4'-C5' and P-O5' in oligo and polynucleotides | 1 | 0
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| 2 | 111 2001 JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS 19(3):381-396
Li W; Ma BY; Shapiro BA Molecular dynamics simulations of the denaturation and refolding of an RNA tetraloop | 0 | 0
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| 2 | 112 2001 JOURNAL OF CELLULAR PHYSIOLOGY 187(1):11-21
Xiao SH; Houser-Scott F; Engelke DR Eukaryotic ribonuclease P: Increased complexity to cope with the nuclear Pre-tRNA pathway | 10 | 1
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| 1 | 113 2001 JOURNAL OF COMPUTATIONAL CHEMISTRY 22(4):407-417
Sommer I; Brimacombe R Methods for refining interactively established models of ribosomal RNA towards a physico-chemically plausible structure | 2 | 0
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| 1 | 114 2001 JOURNAL OF EXPERIMENTAL MEDICINE 194(3):285-299
Beck-Engeser GB; Monach PA; Mumberg D; Yang F; Wanderling S; Schreiber K; Espinosa R; Le Beau MM; Meredith SC; Schreiber H Point mutation in essential genes with loss or mutation of the second allele: Relevance to the retention of tumor-specific antigens | 0 | 0
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| 2 | 115 2001 JOURNAL OF GENERAL VIROLOGY 82():1027-1041
Donnelly MLL; Hughes LE; Luke G; Mendoza H; ten Dam E; Gani D; Ryan MD The 'cleavage' activities of foot-and-mouth disease virus 2A site-directed mutants and naturally occurring '2A-like' sequences | 8 | 0
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| 2 | 116 2001 JOURNAL OF MEDICINAL CHEMISTRY 44(24):4137-4156
Ma ZK; Clark RF; Brazzale A; Wang SY; Rupp MJ; Li LP; Griesgraber G; Zhang SM; Yong H; Phan LT; Nemoto PA; Chu DTW; Plattner JJ; Zhang XL; Zhong P; Cao ZS; Nilius AM; Shortridge VD; Flamm R; Mitten M; Meulbroek J; Ewing P; Alder J; Or YS Novel erythromycin derivatives with aryl groups tethered to the C-6 position are potent protein synthesis inhibitors and active against multidrug-resistant respiratory pathogens | 3 | 3
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| 2 | 117 2001 JOURNAL OF MOLECULAR BIOLOGY 305(1):167-177
Willumeit R; Forthmann S; Beckmann J; Diedrich G; Ratering R; Stuhrmann HB; Nierhaus KH Localization of the protein L2 in the 50 S subunit and the 70 S E-coli ribosome | 3 | 2
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| 2 | 118 2001 JOURNAL OF MOLECULAR BIOLOGY 305(4):785-803
Serganov A; Benard L; Portier C; Ennifar E; Garber M; Ehresmann B; Ehresmann C Role of conserved nucleotides in building the 16 S rRNA binding site for ribosomal protein S15 | 4 | 1
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| 1 | 119 2001 JOURNAL OF MOLECULAR BIOLOGY 306(4):703-716
Whitby MC; Dixon J Fission yeast nascent polypeptide-associated complex binds to four-way DNA junctions | 2 | 0
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| 1 | 120 2001 JOURNAL OF MOLECULAR BIOLOGY 307(1):197-211
Morosyuk SV; Cunningham PR; SantaLucia J Structure and function of the conserved 690 hairpin in Escherichia coli 16 S ribosomal RNA. II. NMR solution structure | 3 | 1
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| 1 | 121 2001 JOURNAL OF MOLECULAR BIOLOGY 307(1):229-246
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| 3 | 222 2001 STRUCTURE 9(8):647-658
Vicens Q; Westhof E Crystal structure of paromomycin docked into the eubacterial ribosomal decoding a site | 12 | 2
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| 6 | 223 2001 STRUCTURE 9(9):751-758
Culver GM Meanderings of the mRNA through the ribosome | 0 | 0
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| 2 | 224 2001 TRENDS IN BIOCHEMICAL SCIENCES 26(2):124-130
Rodnina MV; Wintermeyer W Ribosome fidelity: tRNA discrimination, proofreading and induced fit | 3 | 3
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| 1 | 225 2001 TRENDS IN BIOCHEMICAL SCIENCES 26(9):566-572
Trakselis MA; Mayer MU; Ishmael FT; Roccasecca RM; Benkovic SJ Dynamic protein interactions in the bacteriophage T4 replisome | 1 | 0
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| 6 | 226 2001 TRENDS IN BIOCHEMICAL SCIENCES 26(11):653-656
Brosius J tRNAs in the spotlight during protein biosynthesis | 1 | 0
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| 2 | 227 2001 TRENDS IN BIOCHEMICAL SCIENCES 26(12):705-709
Roll-Mecak A; Shin BS; Dever TE; Burley SK Engaging the ribosome: universal IFs of translation | 1 | 0
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| 1 | 228 2001 TRENDS IN CELL BIOLOGY 11(3):112-115
Potter MD; Seiser RM; Nicchitta CV Ribosome exchange revisited: a mechanism for translation- coupled ribosome detachment from the ER membrane | 5 | 0
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| 1 | 229 2002 ACCOUNTS OF CHEMICAL RESEARCH 35(6):404-412
Brunger AT; Adams PD Molecular dynamics applied to X-ray structure refinement | 0 | 0
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| 5 | 230 2002 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 58():668-671
Mandelman D; Gonzalo P; Lavergne JP; Corbier C; Reboud JP; Haser R Crystallization and preliminary X-ray study of an N-terminal fragment of rat liver ribosomal P2 protein | 1 | 0
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| 2 | 231 2002 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 58():1023-1029
Nevskaya N; Tishchenko S; Paveliev M; Smolinskaya Y; Fedorov R; Piendl W; Nakamura Y; Toyoda T; Garber M; Nikonov S Structure of ribosomal protein L1 from Methanococcus thermolithotrophicus. Functionally important structural invariants on the L1 surface | 0 | 0
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| 1 | 232 2002 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 58():1129-1137
Nureki O; Shirouzu M; Hashimoto K; Ishitani R; Terada T; Tamakoshi M; Oshima T; Chijimatsu M; Takio K; Vassylyev DG; Shibata T; Inoue Y; Kuramitsu S; Yokoyama S An enzyme with a deep trefoil knot for the active-site architecture | 0 | 0
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| 2 | 233 2002 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 58():1700-1703
Vallazza M; Banumathi S; Perbandt M; Moore K; DeLucas L; Betzel C; Erdmann VA Crystallization and structure analysis of Thermus flavus 5S rRNA helix B | 0 | 0
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| 9 | 234 2002 ANNUAL REVIEW OF BIOCHEMISTRY 71():887-917
Shih IH; Been MD Catalytic strategies of the hepatitis delta virus ribozymes | 1 | 0
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| 11 | 235 2002 ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE 31():257-273
Yonath A The search and its outcome: High-resolution structures of ribosomal particles from mesophilic, thermophilic, and halophilic bacteria at various functional states | 1 | 1
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| 4 | 236 2002 ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE 31():303-319
Frank J Single-particle imaging of macromolecules by cryo-electron microscopy | 0 | 0
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| 2 | 237 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(1):55-61
Bacchi CJ; Weiss LM; Lane S; Frydman B; Valasinas A; Reddy V; Sun JS; Marton LJ; Khan IA; Moretto M; Yarlett N; Wittner M Novel synthetic polyamines are effective in the treatment of experimental microsporidiosis, an opportunistic AIDS-Associated infection | 0 | 0
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| 2 | 238 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(1):125-131
Canu A; Malbruny B; Coquemont M; Davies TA; Appelbaum PC; Leclercq R Diversity of ribosomal mutations conferring resistance to macrolides, clindamycin, streptogramin, and telithromycin in Streptococcus pneumoniae | 10 | 4
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| 2 | 239 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(5):1295-1301
Low DE; de Azavedo J; Weiss K; Mazzulli T; Kuhn M; Church D; Forward K; Zhanel G; Simor A Antimicrobial resistance among clinical isolates of Streptococcus pneumoniae in Canada during 2000 | 2 | 0
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| 4 | 240 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(6):1629-1633
Liu MF; Douthwaite S Activity of the ketolide telithromycin is refractory to erm monomethylation of bacterial rRNA | 0 | 0
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| 4 | 241 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(7):2200-2207
Malbruny B; Canu A; Bozdogan B; Fantin B; Zarrouk V; Dutka-Malen S; Feger C; Leclercq R Resistance to quinupristin-dalfopristin due to mutation of L22 ribosomal protein in Staphylococcus aureus | 1 | 0
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| 7 | 242 2002 ANTIMICROBIAL AGENTS AND CHEMOTHERAPY 46(9):2727-2734
Leclercq R; Courvalin P Resistance to macrolides and related antibiotics in Streptococcus pneumoniae | 0 | 0
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| 3 | 243 2002 ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 403(1):63-70
Kramer G; Ramachandiran V; Horowitz PM; Hardesty B The molecular chaperone DnaK is not recruited to translating ribosomes that lack trigger factor | 0 | 0
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| 2 | 244 2002 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 290(1):339-348
Kanesaki Y; Suzuki I; Allakhverdiev SI; Mikami K; Murata N Salt stress and hyperosmotic stress regulate the expression of different sets of genes in Synechocystis sp PCC 6803 | 0 | 0
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| 5 | 245 2002 BIOCHEMICAL JOURNAL 363():553-561
Woestenenk EA; Gongadze GM; Shcherbakov DV; Rak AV; Garber MB; Hard T; Berglund H The solution structure of ribosomal protein L18 from Thermus thermophilus reveals a conserved RNA-binding fold | 0 | 0
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| 4 | 246 2002 BIOCHEMICAL SOCIETY TRANSACTIONS 30():133-140
Marquez V; Wilson DN; Nierhaus KH Functions and interplay of the tRNA-binding sites of the ribosome | 0 | 0
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| 3 | 247 2002 BIOCHEMICAL SOCIETY TRANSACTIONS 30():140-145
Gallego J; Varani G The hepatitis C virus internal ribosome-entry site: A new target for antiviral research | 0 | 0
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| 1 | 248 2002 BIOCHEMISTRY 41(3):869-880
Mathews DH; Turner DH Experimentally derived nearest-neighbor parameters for the stability of RNA three- and four-way multibranch loops | 1 | 0
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| 3 | 249 2002 BIOCHEMISTRY 41(8):2516-2525
Szewczak AA; Kosek AB; Piccirilli JA; Strobel SA Identification of an active site ligand for a group I ribozyme catalytic metal ion | 1 | 0
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| 4 | 250 2002 BIOCHEMISTRY 41(11):3667-3675
Oyelere AK; Kardon JR; Strobel SA pKa perturbation in genomic hepatitis delta virus ribozyme catalysis evidenced by nucleotide analogue interference mapping | 3 | 1
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| 3 | 251 2002 BIOCHEMISTRY 41(11):3693-3702
Polach KJ; Uhlenbeck OC Cooperative binding of ATP and RNA substrates to the DEAD/H protein DbpA | 0 | 0
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| 2 | 252 2002 BIOCHEMISTRY 41(16):5093-5103
Benton CB; King J; Clark PL Characterization of the protrimer intermediate in the folding pathway of the interdigitated beta-helix tailspike protein | 1 | 0
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| 2 | 253 2002 BIOCHEMISTRY 41(21):6573-6582
Dunker AK; Brown CJ; Lawson JD; Iakoucheva LM; Obradovic Z Intrinsic disorder and protein function | 0 | 0
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| 3 | 254 2002 BIOCHEMISTRY 41(25):8113-8119
Disney MD; Turner DH Molecular recognition by the Candida albicans group I intron: Tertiary interactions with an imino G center dot A pair facilitate binding of the 5 ' exon and lower the K-M for guanosine | 0 | 0
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| 2 | 255 2002 BIOCHEMISTRY 41(33):10406-10417
Znosko BM; Silvestri SB; Volkman H; Boswell B; Serra MJ Thermodynamic parameters for an expanded nearest-neighbor model for the formation of RNA duplexes with single nucleotide bulges | 0 | 0
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| 6 | 256 2002 BIOCHEMISTRY 41(33):10426-10438
Soukup JK; Minakawa N; Matsuda A; Strobel SA Identification of A-minor tertiary interactions within a bacterial group I intron active site by 3-deazaadenosine interference mapping | 0 | 0
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| 1 | 257 2002 BIOCHEMISTRY 41(39):11517-11524
Tang L; Johnson JE Structural biology of viruses by the combination of electron cryomicroscopy and X-ray crystallography | 0 | 0
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| 13 | 258 2002 BIOCHEMISTRY 41(39):11602-11610
Polacek N; Swaney S; Shinabarger D; Mankin AS SPARK - A novel method to monitor ribosomal peptidyl transferase activity | 0 | 0
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| 5 | 259 2002 BIOCHEMISTRY 41(41):12520-12528
Mohr D; Wintermeyer W; Rodnina MV GTPase activation of elongation factors Tu and G on the ribosome | 0 | 0
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| 1 | 260 2002 BIOCHEMISTRY AND MOLECULAR BIOLOGY EDUCATION 30(1):21-26
Richardson DC; Richardson JS Teaching molecular 3-D literacy | 1 | 0
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| 10 | 261 2002 BIOCHEMISTRY-MOSCOW 67(3):372-382
Kopylov AM X-ray analysis of ribosomes: the static of the dynamic | 0 | 0
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| 1 | 262 2002 BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1574(3):255-261
DeLabre ML; Kessl J; Karamanou S; Trumpower BL RPL29 codes for a non-essential protein of the 60S ribosomal subunit in Saccharomyces cerevisiae and exhibits synthetic lethality with mutations in genes for proteins required for subunit coupling | 0 | 0
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| 8 | 263 2002 BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1577(1):53-62
Larsson SL; Sloma MS; Nygard O Conformational changes in the structure of domains II and V of 28S rRNA in ribosomes treated with the translational inhibitors ricin or alpha-sarcin | 0 | 0
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| 2 | 264 2002 BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1577(2):175-190
Gnatt A Elongation by RNA polymerase II: structure-function relationship | 1 | 0
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| 5 | 265 2002 BIOMACROMOLECULES 3(1):69-83
He QC; Zhou JM; Zhou DM; Nakamatsu Y; Baba T; Taira K Comparison of metal-ion-dependent cleavages of RNA by a DNA enzyme and a hammerhead ribozyme | 0 | 0
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| 7 | 266 2002 BIOORGANIC CHEMISTRY 30(3):163-187
Seo HS; Cooperman BS Large-scale motions within ribosomal 50S subunits as demonstrated using photolabile oligonucleotides | 0 | 0
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| 1 | 267 2002 BIOPHYSICAL CHEMISTRY 96(2-3):153-161
Blaha G; Burkhardt N; Nierhaus KH Formation of 70S ribosomes: large activation energy is required for the adaptation of exclusively the small ribosomal subunit | 0 | 0
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| 2 | 268 2002 BIOPHYSICAL JOURNAL 82(1):2491-
Moore PB; Hansen J; Klein DJ; Schmeing TM; Steitz TA Structure and function in the large ribosomal subunit | 0 | 0
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| 2 | 269 2002 BIOPHYSICAL JOURNAL 82(1):2492-
Gao HX; Sengupta J; VanRoey P; Korostelev A; Chapman MS; Frank J Toward a molecular understanding of the ratchet movement | 0 | 0
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| 3 | 270 2002 BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY 66(1):103-109
Iwasaki K; Kikukawa S; Kawamura S; Kouzuma Y; Tanaka I; Kimura M On the interaction of ribosomal protein L5 with 5S rRNA | 0 | 0
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| 5 | 271 2002 BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY 66(3):682-684
Hayashi T; Tahara M; Iwasaki K; Kouzuma Y; Kimura M Requirement for C-terminal extension to the RNA binding domain for efficient RNA binding by ribosomal protein l2 | 0 | 0
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| 17 | 272 2002 CELL 108(4):557-572
Ramakrishnan V Ribosome structure and the mechanism of translation | 10 | 3
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| 5 | 273 2002 CELL 108(5):629-636
Nakatogawa H; Ito K The ribosomal exit tunnel functions as a discriminating gate | 6 | 2
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| 7 | 274 2002 CELL 110(6):665-668
Green R; Lorsch JR The path to perdition is paved with protons | 0 | 0
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| 6 | 275 2002 CELL 111(1):129-140
Lancaster L; Kiel MC; Kaji A; Noller HF Orientation of ribosome recycling factor in the ribosome from directed hydroxyl radical probing | 0 | 0
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| 4 | 276 2002 CHEMISTRY & BIOLOGY 9(6):747-755
Vicens Q; Westhof E Crystal structure of a complex between the aminoglycoside tobramycin and an oligonucleotide containing the ribosomal decoding a site | 0 | 0
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| 4 | 277 2002 CHEMISTRY & BIOLOGY 9(8):854-855
Bevilacqua PC Battle for the bulge: Directing small molecules to DNA and RNA defects | 0 | 0
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| 3 | 278 2002 CURRENT MEDICINAL CHEMISTRY 9(9):929-939
Ye XS; Zhang LH Aminoglycoside mimetics as small-molecule drugs targeting RNA | 0 | 0
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| 5 | 279 2002 CURRENT OPINION IN PHARMACOLOGY 2(5):493-500
Nilius AM; Ma ZK Ketolides: the future of the macrolides? | 0 | 0
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| 15 | 280 2002 CURRENT OPINION IN PHARMACOLOGY 2(5):501-506
Knowles DJC; Foloppe N; Matassova NB; Murchie AIH The bacterial ribosome, a promising focus for structure-based drug design | 0 | 0
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| 4 | 281 2002 CURRENT OPINION IN STRUCTURAL BIOLOGY 12(1):72-81
Wild K; Weichenrieder O; Strub K; Sinning I; Cusack S Towards the structure of the mammalian signal recognition particle | 3 | 0
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| 3 | 282 2002 CURRENT OPINION IN STRUCTURAL BIOLOGY 12(2):154-160
Elcock AH Modeling supramolecular assemblages | 0 | 0
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| 3 | 283 2002 CURRENT OPINION IN STRUCTURAL BIOLOGY 12(3):289-295
Fedor MJ The role of metal ions in RNA catalysis | 1 | 0
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| 7 | 284 2002 CURRENT OPINION IN STRUCTURAL BIOLOGY 12(3):301-310
Gutell RR; Lee JC; Cannone JJ The accuracy of ribosomal RNA comparative structure models | 0 | 0
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| 25 | 285 2002 CURRENT PROTEIN & PEPTIDE SCIENCE 3(1):1-53
Wilson DN; Blaha G; Connell SR; Ivanov PV; Jenke H; Stelzl U; Teraoka Y; Nierhaus KH Protein synthesis at atomic resolution: Mechanistics of translation in the light of highly resolved structures for the ribosome | 1 | 1
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| 13 | 286 2002 CURRENT PROTEIN & PEPTIDE SCIENCE 3(1):67-78
Yonath A High-resolution structures of large ribosomal subunits from mesophilic eubacteria and halophilic archaea at various functional states | 0 | 0
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| 5 | 287 2002 CURRENT PROTEIN & PEPTIDE SCIENCE 3(1):79-91
Stark H Three-dimensional electron cryomicroscopy of ribosomes | 0 | 0
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| 8 | 288 2002 CURRENT PROTEIN & PEPTIDE SCIENCE 3(1):93-106
Wahl MC; Moller W Structure and function of the acidic ribosomal stalk proteins | 0 | 0
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| 2 | 289 2002 CURRENT PROTEIN & PEPTIDE SCIENCE 3(1):107-119
Boelens R; Gualerzi CO Structure and function of bacterial initiation factors | 0 | 0
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| 6 | 290 2002 CURRENT PROTEIN & PEPTIDE SCIENCE 3(1):133-141
Kristensen O; Laurberg M; Liljas A; Selmer M Is tRNA binding or tRNA mimicry mandatory for translation factors? | 0 | 0
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| 4 | 291 2002 DRUGS 62(12):1771-1804
Zhanel GG; Walters M; Noreddin A; Vercaigne LM; Wierzbowski A; Embil JM; Gin AS; Douthwaite S; Hoban DJ The ketolides - A critical review | 0 | 0
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| 4 | 292 2002 EMBO JOURNAL 21(5):1139-1147
Pintard L; Bujnicki JM; Lapeyre B; Bonnerot C MRM2 encodes a novel yeast mitochondrial 21S rRNA methyltransferase | 2 | 0
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| 3 | 293 2002 EMBO JOURNAL 21(7):1845-1854
Dong G; Nowakowski J; Hoffman DW Structure of small protein B: the protein component of the tmRNA-SmpB system for ribosome rescue | 1 | 0
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| 5 | 294 2002 EMBO JOURNAL 21(13):3557-3567
Valle M; Sengupta J; Swami NK; Grassucci RA; Burkhardt N; Nierhaus KH; Agrawal RK; Frank J Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process | 2 | 1
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| 1 | 295 2002 EMBO JOURNAL 21(17):4641-4653
Steiner T; Kaiser JT; Marinkovic S; Huber R; Wahl MC Crystal structures of transcription factor NusG in light of its nucleic acid- and protein-binding activities | 0 | 0
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| 2 | 296 2002 EMBO JOURNAL 21(17):4691-4698
Hiley SL; Sood VD; Fan J; Collins RA 4-thio-U cross-linking identifies the active site of the VS ribozyme | 0 | 0
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| 5 | 297 2002 EMBO JOURNAL 21(19):5281-5291
Waldsich C; Masquida B; Westhof E; Schroeder R Monitoring intermediate folding states of the td group I intron in vivo | 0 | 0
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| 1 | 298 2002 EXPERT OPINION ON THERAPEUTIC PATENTS 12(9):1367-1374
Griffey RH; Swayze EE RNA-targeted therapeutics: prospects and promise | 0 | 0
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| 3 | 299 2002 FEBS LETTERS 514(1):2-10
Spirin AS Ribosome as a molecular machine | 0 | 0
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| 3 | 300 2002 FEBS LETTERS 514(1):11-16
Noller HF; Yusupov MM; Yusupova GZ; Baucom A; Cate JHD Translocation of tRNA during protein synthesis | 4 | 2
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Cited nodes | Nodes / Authors | GCS | LCS |
| 3 | 301 2002 FEBS LETTERS 514(1):17-25
Ofengand J Ribosomal RNA pseudouridines and pseudouridine synthases | 1 | 0
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| 2 | 302 2002 FEBS LETTERS 514(1):60-66
Kirillov SV; Wower J; Hixson SS; Zimmermann RA Transit of tRNA through the Escherichia coli ribosome: cross- linking of the 3 ' end of tRNA to ribosomal proteins at the P and E sites | 0 | 0
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| 2 | 303 2002 FEBS LETTERS 514(1):90-95
Szkaradkiewicz K; Nanninga M; Nesper-Brock M; Gerrits M; Erdmann VA; Sprinzl M RNA aptamers directed against release factor 1 from Thermus thermophilus | 0 | 0
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| 1 | 304 2002 FEBS LETTERS 525(1-3):88-92
Shiryaev VM; Selivanova OM; Hartsch T; Nazimov IV; Spirin AS Ribosomal protein S1 from Thermus thermophilus: its detection, identification and overproduction | 0 | 0
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| 3 | 305 2002 FEBS LETTERS 525(1-3):174-175
Bujnicki JM; Feder M; Rychlewski L; Fischer D Errors in the D-radiodurans large ribosomal subunit structure detected by protein fold-recognition and structure validation tools | 0 | 0
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| 3 | 306 2002 FEBS LETTERS 525(1-3):176-178
Harms J; Schluenzen F; Zarivach R; Bashan A; Bartels H; Agmon I; Yonath A Protein structure: experimental and theoretical aspects | 0 | 0
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| 2 | 307 2002 GENOME RESEARCH 12(3):379-390
Yoshihama M; Uechi T; Asakawa S; Kawasaki K; Kato S; Higa S; Maeda N; Minoshima S; Tanaka T; Shimizu N; Kenmochi N The human ribosomal protein genes: Sequencing and comparative analysis of 73 genes | 2 | 0
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| 2 | 308 2002 INDIAN JOURNAL OF CHEMISTRY SECTION A-INORGANIC BIO-INORGANIC PHYSICAL THEORETICAL & ANALYTICAL CHEMISTRY 41(1):54-64
Sosnick T; Pan T; Fang XW; Shelton V; Thiyagarajan P; Littrel K Metal ions and the thermodynamics and kinetics of tertiary RNA folding | 0 | 0
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| 2 | 309 2002 INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY 34(3):263-268
He WJ; Tang SA; Liu WY In vitro interaction of eukaryotic elongation factor 2 with synthetic oligoribonucleotide that mimics GTPase domain of rat 28S ribosomal RNA | 0 | 0
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| 3 | 310 2002 JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY 49(6):935-939
Malbruny B; Nagai K; Coquemont M; Bozdogan B; Andrasevic AT; Hupkova H; Leclercq R; Appelbaum PC Resistance to macrolides in clinical isolates of Streptococcus pyogenes due to ribosomal mutations | 0 | 0
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| 3 | 311 2002 JOURNAL OF BACTERIOLOGY 184(18):5052-5057
Arkov AL; Hedenstierna KOF; Murgola EJ Mutational evidence for a functional connection between two domains of 23S rRNA in translation termination | 0 | 0
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| 7 | 312 2002 JOURNAL OF BACTERIOLOGY 184(20):5733-5745
Ma J; Campbell A; Karlin S Correlations between Shine-Dalgarno sequences and gene features such as predicted expression levels and operon structures | 0 | 0
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| 1 | 313 2002 JOURNAL OF BIOCHEMISTRY 131(4):571-578
Giel-Pietraszuk M; Barciszewska MZ Additivity of interactions of zinc finger motifs in specific recognition of RNA | 0 | 0
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| 2 | 314 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(6):3857-3862
Uchiumi T; Honma S; Nomura T; Dabbs ER; Hachimori A Translation elongation by a hybrid ribosome in which proteins at the GTPase center of the Escherichia coli ribosome are replaced with rat counterparts | 2 | 2
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| 3 | 315 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(11):8835-8840
Agarwalla S; Kealey JT; Santi DV; Stroud RM Characterization of the 23 S ribosomal RNA m(5)U1939 methyltransferase from Escherichia coli | 0 | 0
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| 9 | 316 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(21):19095-19105
Schafer MA; Tastan AO; Patzke S; Blaha G; Spahn CMT; Wilson DN; Nierhaus KH Codon-anticodon interaction at the P site is a prerequisite for tRNA interaction with the small ribosomal subunit | 0 | 0
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| 3 | 317 2002 JOURNAL OF BIOLOGICAL CHEMISTRY 277(38):35712-35719
Guglielmi B; Werner M The yeast homolog of human PinX1 is involved in rRNA and small nucleolar RNA maturation, not in telomere elongation inhibition | 0 | 0
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| 4 | 318 2002 JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY 7(7-8):679-690
Pyle AM Metal ions in the structure and function of RNA | 0 | 0
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| 1 | 319 2002 JOURNAL OF GENERAL VIROLOGY 83():2417-2426
Wengler G; Wengler G In vitro analysis of factors involved in the disassembly of Sindbis virus cores by 60S ribosomal subunits identifies a possible role of low pH | 0 | 0
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| 1 | 320 2002 JOURNAL OF MAGNETIC RESONANCE 157(2):277-285
Weber A; Schiemann O; Bode B; Prisner TF PELDOR at S- and X-band frequencies and the separation of exchange coupling from dipolar coupling | 0 | 0
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| 3 | 321 2002 JOURNAL OF MOLECULAR BIOLOGY 316(3):475-488
Dresios J; Chan YL; Wool IG The role of the zinc finger motif and of the residues at the amino terminus in the function of yeast ribosomal protein YL37a | 0 | 0
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| 5 | 322 2002 JOURNAL OF MOLECULAR BIOLOGY 316(3):725-768
Brodersen DE; Clemons WM; Carter AP; Wimberly BT; Ramakrishnan V Crystal structure of the 30 S ribosomal subunit from Thermus thermophilus: Structure of the proteins and their interactions with 16 S RNA | 4 | 1
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| 1 | 323 2002 JOURNAL OF MOLECULAR BIOLOGY 317(2):191-203
Mathews DH; Turner DH Dynalign: An algorithm for finding the secondary structure common to two RNA sequences | 0 | 0
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| 4 | 324 2002 JOURNAL OF MOLECULAR BIOLOGY 317(4):559-575
Chadalavada DM; Senchak SE; Bevilacqua PC The folding pathway of the genomic hepatitis delta virus ribozyme is dominated by slow folding of the pseudoknots | 1 | 0
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| 1 | 325 2002 JOURNAL OF MOLECULAR BIOLOGY 318(2):287-303
Singh RN; Saldanha RJ; D'Souza LM; Lambowitz AM Binding of a group II intron-encoded reverse transcriptase/maturase to its high affinity intron RNA binding site involves sequence-specific recognition and autoregulates translation | 0 | 0
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| 3 | 326 2002 JOURNAL OF MOLECULAR BIOLOGY 318(3):637-649
Al-Hashimi HM; Gorin A; Majumdar A; Gosser Y; Patel DJ Towards structural Genomics of RNA: Rapid NMR resonance assignment and simultaneous RNA tertiary structure determination using residual dipolar couplings | 0 | 0
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| 3 | 327 2002 JOURNAL OF MOLECULAR BIOLOGY 318(4):963-973
Conn GL; Gittis AG; Lattman EE; Misra VK; Draper DE A compact RNA tertiary structure contains a buried Backbone-K+ complex | 0 | 0
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| 3 | 328 2002 JOURNAL OF MOLECULAR BIOLOGY 320(3):455-474
Tamura M; Holbrook SR Sequence and structural conservation in RNA ribose zippers | 0 | 0
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| 12 | 329 2002 JOURNAL OF MOLECULAR BIOLOGY 321(2):215-234
Mears JA; Cannone JJ; Stagg SM; Gutell RR; Agrawal RK; Harvey SC Modeling a minimal ribosome based on comparative sequence analysis | 0 | 0
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| 4 | 330 2002 JOURNAL OF MOLECULAR BIOLOGY 322(2):273-279
Thompson J; O'Connor M; Mills JA; Dahlberg AE The protein synthesis inhibitors, oxazolidinones and chloramphenicol, cause extensive translational inaccuracy in vivo | 0 | 0
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| 7 | 331 2002 JOURNAL OF MOLECULAR BIOLOGY 322(3):635-644
Davydova N; Streltsov V; Wilce M; Liljas A; Garber M L22 ribosomal protein and effect of its mutation on ribosome resistance to erythromycin | 0 | 0
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| 3 | 332 2002 JOURNAL OF MOLECULAR EVOLUTION 54(3):333-345
Caetano-Anolles G Evolved RNA secondary structure and the rooting of the universal tree of life | 1 | 0
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| 3 | 333 2002 JOURNAL OF MOLECULAR EVOLUTION 55(4):460-469
Misof B; Anderson CL; Buckley TR; Erpenbeck D; Rickert A; Misof K An empirical analysis of mt 16S rRNA covarion-like evolution in insects: Site-specific rate variation is clustered and frequently detected | 0 | 0
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| 2 | 334 2002 JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM 580():1-8
Ferreira R Molecular chirality and the constitution of our biota | 0 | 0
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| 1 | 335 2002 JOURNAL OF PHYSICAL CHEMISTRY B 106(19):5075-5085
Sherer EC; Cramer CJ Internal loop-helix coupling in the dynamics of the RNA duplex (GC*C*AGUUCGCUGGC)(2) | 0 | 0
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| 2 | 336 2002 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 124(13):3238-3244
Stuhlmann F; Jaschke A Characterization of an RNA active site: Interactions between a Diels-Alderase ribozyme and its substrates and products | 2 | 0
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| 4 | 337 2002 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 124(17):4617-4622
Morii T; Hagihara M; Sato SI; Makino K In vitro selection of ATP-binding receptors using a ribonucleopeptide complex | 0 | 0
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| 4 | 338 2002 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 124(38):11307-11314
Kumar JK; Oliver JS Proximity effects in monolayer films: Kinetic analysis of amide bond formation at the air-water interface using H-1 NMR spectroscopy | 0 | 0
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| 3 | 339 2002 MEDECINE ET MALADIES INFECTIEUSES 32():32S-44S
Canu A; Leclercq R Macrolides: a diversity of resistance types | 0 | 0
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| 3 | 340 2002 METHODS 26(2):170-181
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Matte-Tailliez O; Brochier C; Forterre P; Philippe H Archaeal phylogeny based on ribosomal proteins | 3 | 0
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Fredrick K; Noller HF Accurate translocation of mRNA by the ribosome requires a peptidyl group or its analog on the tRNA moving into the 30S P site | 1 | 1
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Hansen JL; Ippolito JA; Ban N; Nissen P; Moore PB; Steitz TA The structures of four macrolide antibiotics bound to the large ribosomal subunit | 0 | 0
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Katunin VI; Muth GW; Strobel SA; Wintermeyer W; Rodnina MV Important contribution to catalysis of peptide bond formation by a single ionizing group within the ribosome | 1 | 1
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Liu MF; Douthwaite S Methylation at nucleotide G745 or G748 in 23S rRNA distinguishes Gram-negative from Gram-positive bacteria | 0 | 0
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Blindauer CA; Harrison MD; Robinson AK; Parkinson JA; Bowness PW; Sadler PJ; Robinson NJ Multiple bacteria encode metallothioneinsand SmtA-like zinc fingers | 0 | 0
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Hamad-Schifferli K; Schwartz JJ; Santos AT; Zhang SG; Jacobson JM Remote electronic control of DNA hybridization through inductive coupling to an attached metal nanocrystal antenna | 3 | 0
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Kramer G; Rauch T; Rist W; Vorderwulbecke S; Patzelt H; Schulze-Specking A; Ban N; Deuerling E; Bukau B L23 protein functions as a chaperone docking site on the ribosome | 1 | 0
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Minsky A; Shimoni E; Frenkiel-Krispin D Stress, order and survival | 0 | 0
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Ehrenberg M; Tenson T A new beginning of the end of translation | 0 | 0
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Schmeing TM; Seila AC; Hansen JL; Freeborn B; Soukup JK; Scaringe SA; Strobel SA; Moore PB; Steitz TA A pre-translocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits | 8 | 6
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Torres-Larios A; Dock-Bregeon AC; Romby P; Rees B; Sankaranarayanan R; Caillet J; Springer M; Ehresmann C; Ehresmann B; Moras D Structural basis of translational control by Escherichia coli threonyl tRNA synthetase | 1 | 0
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Sivaraman J; Sauve V; Larocque R; Stura EA; Schrag JD; Cygler M; Matte A Structure of the 16S rRNA pseudouridine synthase RsuA bound to uracil and UMP | 1 | 0
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Kieft JS; Zhou KH; Grech A; Jubin R; Doudna JA Crystal structure of an RNA tertiary domain essential to HCVIRES-mediated translation initiation | 0 | 0
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Tung CS; Joseph S; Sanbonmatsu KY All-atom homology model of the Escherichia coli 30S ribosomal subunit | 0 | 0
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Musher DM; Dowell ME; Shortridge VD; Flamm RK; Jorgensen JH; Le Magueres P; Krause KL Emergence of macrolide resistance during treatment of pneumococcal pneumonia | 5 | 1
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Nagaswamy U; Larios-Sanz M; Hury J; Collins S; Zhang ZD; Zhao Q; Fox GE NCIR: a database of non-canonical interactions in known RNA structures | 3 | 2
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Kuhn JF; Tran EJ; Maxwell ES Archaeal ribosomal protein L7 is a functional homolog of the eukaryotic 15.5kD/Snu13p snoRNP core protein | 2 | 0
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Wang HC; Hickey DA Evidence for strong selective constraint acting on the nucleotide composition of 16S ribosomal RNA genes | 0 | 0
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Caetano-Anolles G Tracing the evolution of RNA structure in ribosomes | 0 | 0
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Shimizu T; Nakagaki M; Nishi Y; Kobayashi Y; Hachimori A; Uchiumi T Interaction among silkworm ribosomal proteins P1, P2 and P0 required for functional protein binding to the GTPase- associated domain of 28S rRNA | 0 | 0
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Fraternali F; Cavallo L Parameter optimized surfaces (POPS): analysis of key interactions and conformational changes in the ribosome | 0 | 0
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Zhang Y; Li ZJ; Pilch DS; Leibowitz MJ Pentamidine inhibits catalytic activity of group I intron Ca.LSU by altering RNA folding | 0 | 0
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Leontis NB; Stombaugh J; Westhof E The non-Watson-Crick base pairs and their associated isostericity matrices | 0 | 0
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Ponting CP Novel domains and orthologues of eukaryotic transcription elongation factors | 0 | 0
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Ma ZK; Li LP; Rupp M; Zhang SM; Zhang XL Regioselective synthesis of bifunctional macrolides for probing ribosomal binding | 0 | 0
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Ferris JP Montmorillonite catalysis of 30-50 mer oligonucleotides: Laboratory demonstration of potential steps in the origin of the RNA world | 0 | 0
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Giel-Pietraszuk M; Mucha P; Rekowski P; Kupryszewski G; Barciszewska MZ Interaction of a transcription factor IIIA peptide containing two zinc fingers with 5S rRNA | 0 | 0
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Fang XW; Thiyagarajan P; Sosnick TR; Pan T The rate-limiting step in the folding of a large ribozyme without kinetic traps | 0 | 0
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Grundy FJ; Winkler WC; Henkin TM tRNA-mediated transcription antitermination in vitro: Codon- anticodon pairing independent of the ribosome | 0 | 0
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Parnell KM; Seila AC; Strobel SA Evidence against stabilization of the transition state oxyanion by a pKa-perturbed RNA base in the peptidyl transferase center | 1 | 1
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Hansen JL; Schmeing TM; Moore PB; Steitz TA Structural insights into peptide bond formation | 0 | 0
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Jiang M; Shen T; Xu HB; Liu CL The influences of metal ions on protein folding, recognition, self-assembly and biological functions | 0 | 0
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Krab IM; Parmeggiani A Mechanisms of EF-Tu, a pioneer GTPase | 0 | 0
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Ryabova LA; Pooggin MM; Hohn T Viral strategies of translation initiation: Ribosomal shunt and reinitiation | 0 | 0
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Cristofari G; Darlix JL The ubiquitous nature of RNA chaperone proteins | 1 | 0
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Esposito L; Vitagliano L; Mazzarella L Recent advances in atomic resolution protein crystallography | 0 | 0
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Jin HJ; Yang YD Purification and biochemical characterization of the ErmSF macrolide-lincosamide-streptogramin B resistance factor protein expressed as a hexahistidine-tagged protein in Escherichia coli | 0 | 0
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Erhardt PW Medicinal chemistry in the new millennium. A glance into the future | 0 | 0
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Hansen MA; Kirpekar F; Ritterbusch W; Vester B Posttranscriptional modifications in the A-loop of 23S rRNAs from selected archaea and eubacteria | 0 | 0
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Whirl-Carrillo M; Gabashvili IS; Bada M; Banatao DR; Altman RB Mining biochemical information: Lessons taught by the ribosome | 1 | 0
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Semrad K; Green R Osmolytes stimulate the reconstitution of functional 50S ribosomes from in vitro transcripts of Escherichia coli 23S rRNA | 0 | 0
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Kitamura A; Muto Y; Watanabe S; Kim I; Ito T; Nishiya Y; Sakamoto K; Ohtsuki T; Kawai G; Watanabe K; Hosono K; Takaku H; Katoh E; Yamazaki T; Inoue T; Yokoyama S Solution structure of an RNA fragment with the P7/P9.0 region and the 3 '-terminal guanosine of the Tetrahymena group I intron | 1 | 0
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Rinke-Appel J; Osswald M; Von Knoblauch K; Mueller F; Brimacombe R; Sergiev P; Avdeeva O; Bogdanov A; Dontsova O Crosslinking of 4.5S RNA to the Escherichia coli ribosome in the presence or absence of the protein Ffh | 0 | 0
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| 9 | 391 2002 RNA-A PUBLICATION OF THE RNA SOCIETY 8(7):873-877
Gagnon MG; Steinberg SV GU receptors of double helices mediate tRNA movement in the ribosome | 0 | 0
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Lima S; Hildenbrand J; Korostelev A; Hattman S; Li H Crystal structure of an RNA helix recognized by a zinc-finger protein: An 18-bp duplex at 1.6 angstrom resolution | 0 | 0
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Inada T; Winstall E; Tarun SZ; Yates JR; Schieltz D; Sachs AB One-step affinity purification of the yeast ribosome and its, associated proteins and mRNAs | 0 | 0
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Nagaswamy U; Fox GE Frequent occurrence of the T-loop RNA folding motif in ribosomal RNAs | 0 | 0
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Boddeker N; Bahador G; Gibbs C; Mabery E; Wolf J; Xu LH; Watson J Characterization of a novel antibacterial agent that inhibits bacterial translation | 0 | 0
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Whitesides GM; Grzybowski B Self-assembly at all scales | 2 | 0
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Pool MR; Stumm J; Fulga TA; Sinning I; Dobberstein B Distinct modes of signal recognition particle interaction with the ribosome | 1 | 0
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Gong F; Yanofsky C Instruction of translating ribosome by nascent peptide | 1 | 0
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Webster G; Hilgenfeld R Perspectives on single molecule diffraction using the x-ray free electron laser | 0 | 0
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Ikawa Y; Fukada K; Watanabe S; Shiraishi H; Inoue T Design, construction, and analysis of a novel class of self- folding RNA | 0 | 0
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